Array 1 118088-114936 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCQD02000043.1 Acinetobacter baumannii strain D108, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 118087 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 118027 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 117967 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 117907 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 117847 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 117787 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 117727 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 117667 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 117607 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 117547 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 117487 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 117427 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 117367 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 117307 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 117247 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 117187 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 117127 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 117067 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 117007 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 116947 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 116887 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 116827 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 116767 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 116707 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 116647 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 116587 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 116527 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 116467 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 116407 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 116347 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 116287 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 116227 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 116167 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 116107 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 116047 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 115987 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 115926 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 115866 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 115806 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 115746 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 115686 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 115626 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 115566 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 115506 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 115445 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 115385 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 115325 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 115265 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 115205 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 115145 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 115085 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 115025 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 114965 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //