Array 1 70536-70008 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADF01000021.1 Brachyspira alvinipulli ATCC 51933 T324DRAFT_scaffold00012.12_C, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                                                	Insertion/Deletion
==========	======	======	======	==============================	===============================================================	==================
     70535	    30	 100.0	    38	..............................	AGTCTTTTGGTCAGCATGACGATGGTACTTTTGATGAT                         	
     70467	    30	 100.0	    37	..............................	ATAGTGATCCAGTAGAAATTACAAAGGAAAGGCGGCT                          	
     70400	    30	 100.0	    37	..............................	ATATTCACCACAAGCAAAATACTTAAGTTTAACATTA                          	
     70333	    30	  96.7	    36	.................G............	ATTCGTCAATTGATGATTATTTGATGATTATTTTAA                           	
     70267	    30	 100.0	    63	..............................	AGATGATAACGAACAACAAATACAATTGGTTCAATTTGTTTCTAATCTATCCATATTGGTTCA	
     70170	    27	  90.0	     0	...........................---	-                                                              	Deletion [70144]
     70170	    30	 100.0	    37	..............................	ATTTGTCAATTATGAAAAATAAAAATTAAGGAGTTTA                          	
     70103	    30	 100.0	    36	..............................	TACCTGTAAAGCATTTAATCTTCTTAAATCTACAAT                           	
     70037	    30	  86.7	     0	..................A......AC.T.	|                                                              	
==========	======	======	======	==============================	===============================================================	==================
         9	    30	  97.0	    36	GTTTCTAATCTATCCATACTGGAATGTAAA	                                                               	       

# Left flank :   AG
# Right flank :  TTTTATATTAATATTATACTTATAATGAAAATTTTATATTCTATCTAAAAATGTATAAAATGTACTATATATTACTTTACATTTAATTTACATTACAGTATTTATTGTAAAATTTGTTTAAGCAAACTTTACAAAACTCCGATAATATGTTATACTTTAAATAGAAGGATATGATGAATACCTCTTAAAAAACAAATTAAGGAGGAAATATATGAAAAAATTAGGAATTATAACTTTAATATCCACTTTTATTATGAGTGTTAATCTTTACTGCTTTGATTTAATTGAAGATACCTTCGATTTTATTTTTGATGATTTAGCTAAAATAATAGGTATAGTTGTAATATTGGCAGTAGTTATATACTTTTTGAAAAAATATATAAAAAAAGATAATAGCTCTGATAATTAATGTTATATAAATAGGGGGAAAGTAAAATGAAAAAATTAGGGCTTATGAGTTTGATATCTATTATAATTATGTCATCTAATTTATATTGTTT

# Questionable array : NO	 Score: 5.51
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.59, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCTAATCTATCCATACTGGAATGTAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:70.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-2.20,-2.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [4-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [91.7-1.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.41   Confidence: LOW] 

# Array family : NA
//