Array 1 1210781-1211480 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_GL890985.1 Streptococcus sanguinis SK49 strain CCUG 59319 SCAFFOLD1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1210781	    36	 100.0	    30	....................................	CACGGTTTTAGGAATTTTGAAAAGTCTGGT	
   1210847	    36	 100.0	    30	....................................	TTGCCTCACAGTATCCTAGATATAATGTAA	
   1210913	    36	 100.0	    30	....................................	AATATAGAGAGGCTTAATGTTGCCTTTGTA	
   1210979	    36	 100.0	    30	....................................	AATATCCATGGCGTCCATGTTCAACAGGTT	
   1211045	    36	 100.0	    30	....................................	ACAAGTGCAATCACATCACCACCCTGGTGA	
   1211111	    36	 100.0	    30	....................................	AGCTGGGACGACGAATTGACAATCGACGGT	
   1211177	    36	 100.0	    30	....................................	ATTTTCTGTCACAATTGATACGGCTACTAA	
   1211243	    36	 100.0	    30	....................................	CTTTTTGCCAACGGAACTTTTTCAAGCTGC	
   1211309	    36	 100.0	    30	....................................	TAAAATCAAGTTGCACATGCAAGGCCAATA	
   1211375	    36	 100.0	    30	....................................	CAGAATCTTATCTGAAAAAACCAAAACATA	
   1211441	    36	  83.3	     0	......................TT.AT..T.....A	|                             	TT,A,T [1211463,1211472,1211476]
==========	======	======	======	====================================	==============================	==================
        11	    36	  98.5	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   AATCAACTCAATGACAAACCAGAAGTCAAGTCCATGATTGAAAAGCTGGTTGCTACGATTACAGAATTGCTGGCATTTGAGTGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATCACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACTCTAAGTGATACACTTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTGTTTTTATCAATGCGACCGCCTATCTATCAAAGAATGAGTTAGTAAATCTGATAGAGTATATCCAACTAAATCAACTAAGGGTCTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCGCAGTATGTGCTTGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAATAATGGAATTAAACGAACTGAAGTCTAGCTGAGATGAATGGCGTGATTACGAAATTTCGTAAGAAAAATTTTTCTACGAG
# Right flank :  AAGGACTGAGTAAATCAGTCCTTTTGTTCTCTACTTCCCTAAGCAGAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCGGCGTCACCAGTGATTTCGCTGAGGATTTCCCAGGTGCGAGTCATATCGACTTGGAGAAGATCTACCGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGGCTTTCCAGAGCCTTTTCAATCAGGGAGATGTGACGGGCATTGGAAAGATAGGTGGCGTCTTGCTCGAAAATACCAGCATTTTCAAAGAAGAGTTGATTGATGCGTTCTTCAATTTTATCGATATTTTGGTTGTGAAGCACAGAAATCTTGATAGCATCTGCTGGCAGCTGATCCAGCTCAATCTTTTCCTCAAGGTCAGTCTTGTTAAGTAGGACGATACGATTGCTATCTTGGCTGATTTCAAGCAATTGTCTGTCCTGATCCGTCAGAGGCTCGCTGGCATTGAGGACTAAAAGAACCAAGTCAGCTT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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