Array 1 413891-415504 **** Predicted by CRISPRDetect 2.4 *** >NZ_MYUN01000002.1 Salmonella enterica strain BCW_6532 NODE_2_length_538278_cov_3.05061, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 413891 29 100.0 32 ............................. AACTGAAACCAGGCCAGGTGATATTTATCAAA 413952 29 100.0 32 ............................. CCGAGTGTGAGCAGGCTATTTATGATGAGCGC 414013 29 100.0 32 ............................. GGCTCCGAATGTGAAGAATCCGACGCTATTGA 414074 29 100.0 32 ............................. GCCAGCGCGCCTGCGGCAGCACCGGCAGCAAT 414135 29 100.0 32 ............................. CGCATTATTAATGGCGTTGATGTTCTGGCGGG 414196 29 100.0 32 ............................. GTAATCAATCTCATATAGAGCGGGGGGGGGAT 414257 29 100.0 32 ............................. TTGATTGATCGTTATCAATGGGGAAAGAGATG 414318 29 100.0 32 ............................. TAATACCCGATCGAGCGCACTGTGTCGCCGGA 414379 29 100.0 32 ............................. CGCGAGCAATCCCATCTGACGTTCCGGAGACA 414440 29 100.0 32 ............................. GTCATCGTTATACACGTGACGGTTTTAATAGT 414501 29 100.0 32 ............................. AAAATGAACAGCCACACATCCGCCAATAAAAA 414562 29 100.0 32 ............................. GCTGTCGGTCGCAGTGTGGATATTGCGATCAA 414623 29 100.0 32 ............................. GGGCTGAACGGCGATCTGATTACGTGGAGTAA 414684 29 100.0 32 ............................. TACGCCAGCTATAAGGGGTACACGAACAGCTT 414745 29 100.0 32 ............................. GCCCGAGAAAAGTTGCTTCTCTTTGCTGCTGC 414806 29 100.0 32 ............................. CATACCCTGTAGTTTCAATTTCCGCAGGTGGG 414867 29 100.0 32 ............................. AGCGCGGAATGATTTTTAACGCTGAGATGGTG 414928 29 100.0 32 ............................. TACCGCGACACCGTCAACGACAGCAACCACTT 414989 29 100.0 32 ............................. CAGGTCACTAAAATTTGTAGGGTTATCCACAG 415050 29 100.0 32 ............................. GCGCAATTGCAGTTTGACGCGGTGCTGTCATT 415111 29 100.0 32 ............................. TGTCTTAACTCCATTGCTGAGTCGATTGTGAA 415172 29 100.0 32 ............................. CACACAGAACGCCAGTTATAATCATCGGTGCT 415233 29 100.0 32 ............................. TCGTTTGTGGCGTCAGTAATACTATTATCGGT 415294 29 96.6 32 .............T............... TTTTTAAATCCGGACAGACCCTGTAACGGATC 415355 29 100.0 32 ............................. ATCCGACTGTATGCCCAGCAGAACGAGGGCGC 415416 29 96.6 32 .............T............... CACGAGTGGCAAATTGATTTCGACGAAAAACC 415477 28 82.8 0 ...............A.AA....-.G... | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GAAATCAAGCATCCCGTTGGGCGAGTTCGTGATATTGAGGCGCTGGATGAACTGTTAGCCACGTTGAGCGATGATAAACCGCGCGTGATTGCTTTGCAGCCCATTAGCCAGAAAGAAGACGCGACGCGTCTGTGTATTGAAACTTGTATTGCACGTAACTGGCGGCTGTCTATGCAAACGCATAAATATTTAAATATCGCCTGATGCATTACTAATCTTACGGACGGCCTGCCGATGCCGTCTGTGACTTATCCATTACCTTGCATTGTTTATTTTCTCTATGTGAATTTCGATGAGTGTATAAAAGCGCGGATAAATTTTTCCATAGCGATGCATGGATCACGCTATTTTGGTAAATTTAAAGAAAAAATCATTCTATGAACTTTTTTGCATCAAAATCAGCAAATTAGCTGTTCTTTAATAATTTAAATTGTTGCGATTATGTTGGTGGAATGTAGTGCTGATAAAAAGTAGTTTATAAACAATGATATCCGTTTAGT # Right flank : GTTGCATAATCATAATCTGTGTACCAGTAATGGCAGCTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTCCCGGGGAGGCTTTTAGACAGGAGAAGGCCATGGCGTTAAGGATCAGGGTATTGCTCGAAAATCATAAGGGAGCTGGAGCGGATAAATCGTTGAAGGCCCGGCCAGGATTAAGCCTGTTGGTCGAGGATGAGTCTACGTCGATCTTGTTCGATACCGGCCCTGATGGCAGTTTTATGCAAAACGCGTTGGCGATGGGGATCGATCTGTCCGATGTGTCTGCTGTGGTGCTTTCGCATGGTCATTACGATCATTGCGGCGGCGTGCCGTGGCTTCCTGATAACAGTCGAATCATCTGCCATCCCGATATTGCGCGCGAACGTTATGCGGCAATGACTTTTCTCGGTATTACCCGAAAAATAAAAAAATTGTCGTGTGAGGTGGACTATTCACGCTACCGAATGATGTACACGCGTGGACCCCTGCCGATTGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //