Array 1 36173-39260 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTBI01000024.1 Shewanella algae strain CLS1 scaffold00024, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 36173 28 100.0 32 ............................ TGCAGGTATTGCTGCCAGTCTGCGGCGAGCCA 36233 28 100.0 32 ............................ CCTTCTAAAGAACGGAGTTTCAGTGATAAAAA 36293 28 100.0 32 ............................ ATTAGATGCACCCCTCTACGAACTGCTGAAAC 36353 28 100.0 32 ............................ AAGCCTTGCGGTCACCGGCTACTTCCAGAGTC 36413 28 100.0 32 ............................ ATGTTCAGCAACTGCTGACGGTGTGACGCACG 36473 28 100.0 32 ............................ GCTTACCTTCTCCCACAACACGACATCCGTAT 36533 28 100.0 32 ............................ ACTAATGAGAAGATAGTTTTTAGGACAGCTGC 36593 28 100.0 32 ............................ TTGGCGGCTTTAACCACGGCCATGTATGCAAT 36653 28 100.0 32 ............................ ATTGAGGATTTAACCGCTGCGGTAAGCAAGGG 36713 28 100.0 32 ............................ ATTAATCATGACCCTAACCTCACAAAAGGTAT 36773 28 100.0 32 ............................ TGGGACGGCCGGCACCCTTTCGAGCACCACCA 36833 28 100.0 32 ............................ CTTATGAAAGCCTTCCTTCTTCTTGGTCTACC 36893 28 100.0 32 ............................ TTGGCGCTGGCTTGGTTGCCGCGCTCGATGTA 36953 28 100.0 32 ............................ CTGCATTTGATATCGCTGCGGCTGTGCAATCA 37013 28 100.0 32 ............................ TTTAGGCTGTAAACACTGTTTCAATACAGGAC 37073 28 100.0 32 ............................ GGTCATTGCTTGCTGAATGGACTTCATACAAC 37133 28 100.0 32 ............................ AACAGGGTCAACATATGTTCCAAGCACCAAAC 37193 28 100.0 32 ............................ AAATGCAAATCGCCGTTGAAATCCTCTGATTT 37253 28 100.0 32 ............................ AGTAAGGTAATACTGGACTTTTGTCTCACCGG 37313 28 100.0 32 ............................ CGCCCCAAGTAAAAAAAAGTGGCGGCCTTTAG 37373 28 100.0 32 ............................ TTCATACTCCGGCAATTCATCGTCATTTTGCT 37433 28 100.0 32 ............................ GTGCCAATAGATTCCAAGGTCTTGAATCTGAG 37493 28 100.0 32 ............................ AAACACTACTGCGAGAGTGTTTGGGATGTGGA 37553 28 100.0 32 ............................ AGACTAAATCAAAGGCATTGCTTTACATGCTT 37613 28 100.0 32 ............................ AACAGACTTCAATCATGTCCTTAAGATCACGA 37673 28 100.0 32 ............................ TGACAACTCCCCTGAATCGCTCAAGCGAAAAC 37733 28 100.0 32 ............................ AACGAAGAGTCAAACGGATGGGCCGCCAAGAT 37793 28 100.0 32 ............................ ATCATTGAATCGAACCCATCCGCTAACTGCCG 37853 28 100.0 32 ............................ TGAAAGGGAACTTTGCACTGATCTCCACAATG 37913 28 100.0 32 ............................ TGAAAGGGAACTTTGCACTGATCTCCACAATG 37973 28 100.0 32 ............................ TAAAGTATCCAATCCGACCAAGCAGGAAGCCA 38033 28 100.0 32 ............................ GTAACGGAAGCGCCAAAAACTGAACCCGTAAC 38093 28 100.0 32 ............................ CATCGGCGAACATCCAGCATTGCTTGTTGGGC 38153 28 100.0 32 ............................ GCCGTCACATTGCAAAATTGGGGGCGGGGAAA 38213 28 100.0 32 ............................ ACTGGCGCGGGCTGAACTTTCAGCACCATGTG 38273 28 100.0 32 ............................ CAACCCCTTGTAATCCGGGTTTGGCTCAATAC 38333 28 100.0 32 ............................ TTTTTCCCAGCGTTGCCAGGTGCGAGGCTCAC 38393 28 100.0 32 ............................ TCAATAACTTTTCGACGATTGTCACTTTTAAT 38453 28 100.0 32 ............................ TACGGCCATTTTCTCCACTCGGGTCGGGTCAT 38513 28 100.0 32 ............................ TGTCCAGGGCTCCAAAGTCTGGCCCATCGTTT 38573 28 100.0 32 ............................ GCCAGAGTCTCTGATGAGTCGATGCGAAATCC 38633 28 100.0 32 ............................ AATTCTGAAGGGAACGTGCAGCACAGAGCTAA 38693 28 100.0 32 ............................ TGGCGATACCAGTGGCACAGGTCGAACCGACA 38753 28 100.0 32 ............................ AGCAGCCTGCTTCAAAATGTCAGCAGTTGTTT 38813 28 100.0 32 ............................ ATCATAAGCTGGCGGGACTGCCTCCAAATCCT 38873 28 100.0 32 ............................ TGACAGACACCGTAGAAATCACATTTCTCGTT 38933 28 100.0 32 ............................ TGTTGGCGGTATGCCCACCGATGCGACACCTG 38993 28 100.0 32 ............................ GTTACTTATGAGCCGTCTCGGGGTCGGACCGA 39053 28 100.0 32 ............................ GACCAGGACGACGCGATCATCAAGCGTTACGA 39113 28 100.0 32 ............................ TGTATTTGCGGCGCTGGTCGCCGGACGAGATC 39173 28 100.0 32 ............................ GGGCAAGCGCATTGTCTTGACCATTCCGACCA 39233 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 52 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACAGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGTATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTGTTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACATTCTTTTATTGCTTTATTCTATT # Right flank : AGTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAAGTGATCTGAATAGTGGCCCGGCTCAAGGCAGCATATCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCATCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGTGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACACTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGGGAGCGGATAAGCGGGGCAGTGTAGCTAACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGATGGCCAGAAGGCAAACAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //