Array 1 4060-3021 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFKD01000135.1 Azospirillum brasilense strain BR11649 NODE_134_length_19272_cov_10.993053_1-19272, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================ ================== 4059 32 100.0 36 ................................ CGCATGCCGGGCGCCAACGCCACCGCGATCCATGCC 3991 32 100.0 34 ................................ TGCAAACACCGCGTCGCCCTGCTGGACGGTGACG 3925 32 100.0 35 ................................ GTCCTGAACCCCGGAGCCTTCGTCCTGGCCGTCAC 3858 32 100.0 35 ................................ CCCGACGTGAAGGGGATGTGGGTTCTCGACGGCGG 3791 32 100.0 34 ................................ CGCCAGATCGAGACAGCCGTCGGCGGCGCCGCCG 3725 32 100.0 34 ................................ TGCATCCCGGCAGCGGACGTGTTGATTCCGGCGG 3659 32 100.0 34 ................................ GCGGTGTGGGGCCAACGAGCAGCGTGTCTGGGTG 3593 32 100.0 35 ................................ ACGAAGAGGGCCGACTACAACGCTGAGCAAGCCGA 3526 32 100.0 35 ................................ ACGTTGAAGGCGCCGGGGCCGGCACCGACGATGAC 3459 32 100.0 34 ................................ TCCGCAGCGGCGCCGCCGATAATTGGCGCAACAT 3393 32 100.0 33 ................................ TGGTTTTTCGCGGGGTCGAGCCAAGCGCCACCG 3328 32 100.0 36 ................................ CAGGCTGGACATCACCCACGCCCGCATCGTCTGCGT 3260 32 100.0 34 ................................ ATCGGGACCGAGCTGCACCCGACCTACTTCGGGC 3194 32 100.0 44 ................................ GACTCCCTGATCGAAGGGCCGACGATTGGCAGTCAGTACGTTGA 3118 32 100.0 34 ................................ TGGTACGGCGTGGTGGCCGTCTCGGGCTGCGGCT 3052 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ============================================ ================== 16 32 100.0 35 GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Left flank : CTGGATGGCTACCCGCCTTTTCTATGGAAGTGAATCCCCATGCTGATGCTCATCACCTACGATGTGAACACCCAGGATGCACCCGGGCGCCGCCGGCTGCGCCGGGTTGCCAGAGCCTGTCAGGATTTTGGGCAAAGGGTTCAGTTCTCGGTTTTCGAATGCGACGTCGACCCGGCACAATGGGCCGTTCTGCGTGCCCGTTTGATCGGAGAAATCAATCAAGAGACGGATAGTCTCCGCTTCTATCATCTCGGAGCCAACGCGGCCCGCCGCATCGAGCATGTGGGCGCCAAACCGGTGCTGGATCTCGGTGGCGCATTGATCTTTTGATCGGTGCGAACCGGAAGCGGACACGAAACCCCCGAGGGGTTCGCACGTCATTCTCATCAATGACTTGTGCGGCTCCGACACCGGAATGACTGCTTCTGCGGCCGCTTTCGAAGTAGGTTCGCATCCGTCGGGGGATTGTGGGTTCTTGAACAAGTGCATAAAGATGAGGA # Right flank : CACACGCTCGAGGAAGCCGGGCTGATCGGAACGCGTCGCCCTTCGTGCGAGGGCTGCTTCCTCAAGCCGAATCGCTCCTGTTGTGAAAATCGGTTCATGACGGCTCGGGGAAATTCAGCGTTCCCAGGGCATCGGCAGGTTCAGTCTATCTGTAACTTGATACGGGTGTATTGAGTCATGGTTGGGCTAAACCTGTTGATGTTTTAAATAGGTTAAGGTGGGCCGACTTTTGACGGTCCTGTTTCCATAATAAATCTTAAGACAAATGGACCGTCACTGCTCAATTATTATCACTGCTTCGGGTGAAGGCTCACGATGCGCTGCGGCGGTTTGGTTCTGCCCGGTTTAGGTGTGGGCGGGGCGCCATCCGTCTGCTAAGGAAGAGGGCGCGGCCGCCAGCCGCGGGTGACGAGAATGCGAGGGGCGGGAAGCGCGTGTTCGTTGATAGCTTTATGAATGACCGATGCCTCTCATGCGCTGATGTCCGGTCCGTCCATGGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : NA // Array 2 12886-13252 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFKD01000135.1 Azospirillum brasilense strain BR11649 NODE_134_length_19272_cov_10.993053_1-19272, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 12886 32 100.0 34 ................................ TTCAGTGCGCGGTCCATGCCGGTGCTGGTGCCTC 12952 32 100.0 36 ................................ GACCAGGAGCGAAACCCATCGAGGTCCCAGGCCCAG 13020 32 100.0 35 ................................ TCGACGACCTCGATGGCCGGTTTGAAGCCGTCCTC 13087 32 100.0 35 ................................ TTGTTCCACCATTCCCTGATCCCGGCGATATCATC 13154 32 100.0 35 ................................ CGTCCGCGTCCGCTTGGTCAGAGCGGGCGCGGCGG 13221 32 96.9 0 ....................C........... | ========== ====== ====== ====== ================================ ==================================== ================== 6 32 99.5 35 GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Left flank : TCGTGCGCCAAGGTCCGCTTGCCTCGGCCGGAGCGGCAGTCGAGGCATGGCCTCCTCCCAACGGAATGGACAGCGGTTCGGGCGGTCGTTCGCTCGGCCCGTTAAGGACGTTTGTTCGGGAGAGGGGTGCGGTTGAGTGTCGGAAGAGGATAAGGATCGTCGTAATCGTCAAGGCTGAGGAACGGGTTCCGCTTGCCCCATCTGGGAGCACATGGCGCCCGCCGATGAGCAAACGGTGGGTGGAACACTGATCGGTGTCGAGGCGGCCTGCCGTATCGAGCACAGGGTGTCAAACCGGTGCTGGATTTCGGCGACGCGTTGGTTTTTAAATCGGTGCGAACCGGAAGCGGACATGAAACCCCCGAGGGGTTCGCACATCATTCTCATCAATGATTTGTGCGGTTCCGACATCGAGATGGCCGCTTCTCGATTCGCTCCCGATGGAGGTTCGCGCCCGTTGGGGGATTATGGGTTGTTGAACAAGTGCATAAAGATGAGGA # Right flank : CAGATTATTACTATTTCGAATGCTTTGAATCGGGCCATCTTTATCATAGAACCCAAGTCACGCTAGTTCGGATGGACCCTGATTTCTCAGAACATCAACAAAGACTGCCCAAGCGTGACCCGACATAAGCGGCTTCGTCACTGGGAGATGGCCCTGACGGCGAAGTCTTGAAGGAGCAGCACCATGGGGCCGATCCCGCAGCCCCGATCGATTGTCCTGCCCTCGCGCCGGTTCTATTCATAAACGGCGTTTCTGACATCGGTCGGAAACGCCCCAGCCATGCCTTCGAACGCGGTGTTTGTCAGGGCAACCACCGAGAGGCCGTTCTTGCGGTCGATGAACCAGGAATGGCCGTAGGCACCGCCCCATTGCAGCGTGCCAGCGGCCTGCGGTGTGCCCGTCAATGCCGGATCGTCCAGCACCGCCCAGCCATAGCCGAAGCCCCAACCCGGCCCCTGCGTTTGCGCCGTCGCGCCGACCTGATCATGGACCATCAGCCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA //