Array 1 3680389-3679446 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066801.1 Streptomyces sp. HSG2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3680388 28 100.0 33 ............................ CTTGCGGCCTTTGCCGCGGTTGGCGTTGGCGAT 3680327 28 100.0 33 ............................ CGCTGGACTCGTCGACCGAACCGGCCGCACCCA 3680266 28 100.0 33 ............................ GCCGGAGGACGTCGACGACTTGCCCATGGTCGC 3680205 28 100.0 33 ............................ CCAGGTGCCGCCGGAGTGGCGTCAGCCGGGCAT 3680144 28 100.0 33 ............................ CGCCTGAAACACGCTGTGCGGTCGTCTCCCGCT 3680083 28 100.0 33 ............................ CACCTCCGCCGCCCTCCCCGTACGCACCCGACC 3680022 28 100.0 33 ............................ GGCGAGACAGGAAACGTTGCGTTGACGAGCGTA 3679961 28 100.0 33 ............................ CCGCGTGAGGAGATTCGGTGCGATGAGCTTGTG 3679900 28 100.0 33 ............................ GGTGTTCTTCGTGGATTCAGGGCCGGATCTTCC 3679839 28 100.0 33 ............................ GGTGTCGGCCCGTCGGACATGGCGCGCTGGACG 3679778 28 100.0 33 ............................ TCCGATGTCGCGGGAGGCGCGGTTCGGGATGTT 3679717 28 100.0 33 ............................ GGGGTACCGCCCGCCACCGGGAACCGCCACCGG 3679656 28 100.0 33 ............................ CATATGTCGCCGGATCCGGCTTTGGCCGACGCG 3679595 28 100.0 33 ............................ CCCGGGTCGGGCCGACCCCCCGGGGCGCTCCCA 3679534 28 100.0 33 ............................ CTGCGGGAACGCCACGGTCACGGGTGTCGGTGT 3679473 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 16 28 100.0 33 GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Left flank : CCGCCGGTCCGTCGGCAGACGCCCCCACGTCAGCCCCGCCGCCAGCACCCGCGCGGCCTCAGCGGCATCCATGGCCTGGAACGCGGGGCACGCCTTCCCGCAGTCGTGAATGCCGCACACCCACATGAACCACAACCGCCCCCGGCCACCACTGATCTCGTCCAGCCGCCGCCGGAACGCCGGCGACACATACCTGTCCCACATCACCCCCGCCACAGCAGCCGTGTCCAGCAGATGCCCCAGCAGCAGATGCGTTCGTCCGCCGTTACGCGCGGCTGACTTCCCCCACAGCCGCGACACCCGCTCGACGGCCTCCGGCGACAGACCCATCGCCTTCATCAACTCGACGATCGAAGTCCCACGATCCACGAAACCCCCCAAATCCAACGTCCCGGCACCATAGGCTCTACCACTGACATCGCCTGGGGCGAAAACAACAGAGCTGAACCCAGGTAAATGAAAAGCACGGCTCTTGGCAGCGTCACTGCAGGTCAAGAAGT # Right flank : GCCATTCAGAGTGCGAGATGTGGCGTTTTGTCGGTCTTGTCATCGCTCGATGGTGTGACGTTGGGGCATCGTTGCCGGTCAGGCGTTCGGGGTTCGCTTGGGTTGTGGCATGAGCATGCGCAAGCCGTACCCGAGTGATCTCACCGATGAGCAGTGGGAGCTCGTCGAACCCGTGATCACGGCGTGGAAGGCCCGGCATCCGTCGGTCAGCGGGCATCAGGGGAAGTACGCGATGCGGGAGATCGTGAACGCCATCCTCTACCAGAATCGCACGGGGTGTCAGTGGGAGTTCCTGCCCCACGACATGCCCCCGCCCGGAGCGGTGAAGTACTACTTCTACCTCTGGCGCGACGAGGGCACCGACCAGGACATTCACGACCTGCTGCGCTGGCATCTGCGAGAGAAGCGGAAACGATTAGCCGACCCGAGCCTGGTGATCCTGGACACGCAGAGCATCCACGCCGCAGTCGGTGTCCCGGCCACGACGACCGGCAAGGACG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3690859-3692655 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066801.1 Streptomyces sp. HSG2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3690859 28 100.0 33 ............................ GTCCGCGTCCAGAGCCGAGATCTGCGCGCTGGA 3690920 28 100.0 33 ............................ CATGATCGACAGGGGCCAGGCGAGCCGCGGGTG 3690981 28 100.0 33 ............................ CCGATGCTCGTCATCATCGACGAGATCCTAACA 3691042 28 100.0 33 ............................ CTGACCCCGTCTCGCGCGCGCATGCGTAGGGCC 3691103 28 100.0 33 ............................ TGGGATTGTCGGGAAGGTCAATCGATAGCTTCC 3691164 28 100.0 33 ............................ GTCGACCACGTTCAGCCAGTCCCGCACCGAGGC 3691225 28 100.0 33 ............................ CCCGTCGTCGGTCTCACTGGACGAGTACGCGTT 3691286 28 100.0 33 ............................ GAGGTGGCGGCCGAAGACGTTGGGGGCGAGACG 3691347 28 100.0 33 ............................ GGGTGACAGCACTGCGCTCGTCGCCTGTCGCGT 3691408 28 100.0 33 ............................ CTCATGGTCGGCCTGTTCAAGGACGGCATCGGC 3691469 28 100.0 33 ............................ GATCACCGGCGGCGTCCTCAGGGCCATGGCCGG 3691530 28 100.0 33 ............................ CGTGGATCCCGGATGGGGGTGGGAGCCCGTCGC 3691591 28 100.0 33 ............................ CGTGCGCCTCGACTCCGCCTACCGGGCGGTGGT 3691652 28 100.0 33 ............................ CACCGCCGCCGACTCCTCGTCGTCGAAACGCTC 3691713 28 100.0 33 ............................ CTCAGCGGAGGGACAAGACGCGATCGGGAGCGT 3691774 28 100.0 33 ............................ TCCGGCCCTCATCACCGTGGCGGTGGTGCTCGT 3691835 28 100.0 33 ............................ GACTGTGGGACTGGTCAAACCGCCGGGTGTCCT 3691896 28 100.0 33 ............................ TGGACGTGTGGAGGGCGGGGATCCCGATCGGGT 3691957 28 100.0 33 ............................ GACTCCCGGGCGAACCAAGCGGGACCGGCGCGC 3692018 28 100.0 33 ............................ CACCCCTACTCCGGCGAACCACGCCTCAGCTCC 3692079 28 100.0 33 ............................ GAACGACGCCTCCGTCGTGATCGTCGTCGAGCG 3692140 28 100.0 33 ............................ CCGCGCCGGACTATGGGGCCTGACGGCGGGCAC 3692201 28 96.4 33 ...................C........ CTCGTGCGGTTCCGCTCGCGTACCTCCGAAACA 3692262 28 96.4 33 ...................C........ CCGGTCGCGGGCGCAGATCGAGACGGCCCGGGA 3692323 28 100.0 33 ............................ TTCGCCTCCGTGCTGGGGTGTGCGCGAAGCACC 3692384 28 100.0 33 ............................ CTCCGCGACGCTGGACCAGGGGGACCCGGTCGA 3692445 28 100.0 33 ............................ CAGGCCGGCCGGTACGCGGGCTCCGCAGGCCGG 3692506 28 100.0 33 ............................ GAGGATGACGCCGAAGACGATCACCCAGGACAG 3692567 28 100.0 33 ............................ GCGTGTCCCCTGCCCGCACGGTGTACGAACCGG 3692628 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.8 33 GTCGTCCCCGCGCCTGCGGGGGTAGCTC # Left flank : CTGCCGGACGAGGACCTCGGCGCCCTCTGGGACGACGGCGAGACCGTCGTCAGCAGCGGCCGCAACTGGAGCGCCACGCACCACCTCGACGTCATCCCGGAACCCACCGACCCCACCCCTGCGGGGACGGCCCCGTGAGCGCCGGAACGACCGTGGTTGTCCTCATCGCGGCCCCTCCTGGGCTCCGGGGACACCTCACCCGCTGGTTCGTTGAAGTGGCCGCCGGCGTCTACGTCGGCAACCCCAACGCCCGAATCCGTGAACGCCTTTGGAATGTCCTCGCCGAGCGCATCTACGACGGCCAGGCCGTCATGATCGAACCAGCGGCCACGGAACAGGGCTGGACCGCCCGCACCGCCGGCCGCGACCGCTGGACCCCCGTCGACTTCGACGGGCTGACCCTCATTGCCCGCCCGCGCCAGACCGGCCAGCCCTGGCGGCCCGCGAACGAGGTGAAGCAAAATGACGTGATCACCTGACAACACCGCAGGTCACGAAGT # Right flank : CCTTCCCCTGCGTTCCACAGTTGAGCGGGGTTCTCGGGGGTGCGGCAGGGCATCGGTGCAGGTCAGACGGTTGCGTCTAGTGCGAAAGGCCGAAAACGCCTAGTGGCACGATGTGGTGACCCCATGCCTGCGAACTGCAATGATGTGCGTATCGTCTAGCGGCATGTACGTGAAGACGACGTCCCGGCGGAACAAGGACGGGCAGACGGTCCGGTATCTGCAGCTGGCCCACAACGAGTGGGACCCGGCCGTGGGGCGTTCGCGTACGAAGGTGCTGCACTCCTTCGGCCGGGAGGACGAACTCGACCGCGAGGCGGTGCGCCGACTGGTCGGCGCGCTGTCGAAGCTGCTGGACCCCGCGTCCGCGCTGTCGGCGACCGGCTCGACAGACCTGTCACTGATCGGTTCCAGGCCGTGGGGCGGGGTGCACGCGCTGGACGGACTGTGGCACCGGCTCGGCCTCGACGCTGTCGTGCACCGCCAACTGGCCGGGCGGCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 3694669-3695672 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066801.1 Streptomyces sp. HSG2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3694669 28 100.0 33 ............................ CTCACCCTCTAGCGTCCCCTCATACGTCGGCAT 3694730 28 100.0 33 ............................ CATGGAGGAGGCCCGTGGGCGCACCATCCTCCT 3694791 28 100.0 33 ............................ CAGGTCCGGGTCTCCCTCGTCCTTGCAGATGGC 3694852 28 100.0 33 ............................ CGCTGTGATCACCTTCTGGTCCACTGCCGACGG 3694913 28 100.0 33 ............................ GCCGGGGGCTACGCGGATGTGCACGTTCTGGGT 3694974 28 100.0 33 ............................ GGCGGTGATGTGCTTCTTCGAGGTCTCGCCGTC 3695035 28 100.0 33 ............................ CCGGGTCACCCAGCCGTACCGAGCGCCGTGGAG 3695096 28 96.4 33 ............T............... CCCGACCCCGACACCGTCGTGTCCACCGACGAC 3695157 28 100.0 33 ............................ CGTCACACCCGCCTCCGCCCGGACACCGACAGG 3695218 28 100.0 33 ............................ CGCCCACCCGTTCCTGCTCCCACCGCCCGGCAC 3695279 28 100.0 33 ............................ CGCCCACCCGTTCCTGCTCCCACCGCCCGGCAC 3695340 28 100.0 33 ............................ CTCCATGACGGGGGCGACTCCGGTGGCGAAGGC 3695401 28 100.0 33 ............................ AACCACGGACATGGCTCCGATGGCGAGCGCGAT 3695462 28 100.0 33 ............................ CCTTTGATCGGTGGGGCCGGAGCATGAAGAGGG 3695523 28 100.0 33 ............................ GGGTGCGGCGTCGACCGTCCCCGGGGTGGCCGC 3695584 28 100.0 33 ............................ GCTCACGGCGACCGACGTCTGTGCGGGCGCCCC 3695645 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.8 33 GTCGTCCCCGCGCCTGCGGGGGTAGCTC # Left flank : CCGAGGACATCGCGCTGGGTTACCAACAGCTCCTGGAAGTCGAGCGCGGCTGGCGCGATATGAAGCAAATTCTCGATCTCCGCCCCGTCTACCACCGCCGCGAAGACCGCATCCGCGCCCACGTCCTGCTGTGCTGGCTCGCCCTGCTCCTGATCCGCGTCGCCGAGACCTCCACCGGCCAGACCTGGAACCGCCTGCGCGCCGAACTCCAGCGCCTGCACGCGGTCACCTACACCGGCCCGGCCGGGACCTTCCGTCAGTCCACCGACCTCACCAAGCCCCAGCGCGACATCTTCACCGCCCTGAACGTCACCCCGCCCAAGAAGATCATCGATCTGACCACAGGCCGCTGACCAGGCACTATCCCCCCGCCTAGTGACACGCCATCTCGGCGTGCTCACAGGCATTTCCGCAGGTCAACCCACGTTTCCGTTCCCTACCCGACACCACCAACTGTGGAACTCAGGCTTCCACCACTTGGCCATGGGTCACTCCCCCCG # Right flank : CACGGACGCGGGCTTTGGCTTGTTCTTTAACCTCTGGCCTCGAACAGCGCGTCGTACGAGGTCACTCACCTGTGGATTCGCCGGACAGGCGGACGGCCTTCGCATGATCCTGCGTTCCGCCAAGGAAACAGATTCATACGAAGGCCGCAGGGGTGAGTGTGCTCGACGACGGTGCCCGGCGTGAGGCGTTCGACTTCACGTCACACTTCCGGGAAAACTTCTACGCGTGCCTGACCCGGCGCGGTGACACCCTGTTCGAGCTCGCGGACGCGATGCTCTGCGAGAACGGGCCCGTCACGTCACCGGTCGACCTCACGCTCCTGGCCGAGCACCGGCGCGGGCACGGCGCCCTCTACGACGCGCTGAACAGCGGGAACATCGACGAAGCCGGGCTGCGCCGGGCCCTGGCGATCCTGCCGCAGCCCAAGGCCGCCGACAACCGCCTCGTCCTGGCGGTCGACGTGACGCACTGGCTGCGGCCGGACGCGCCGTGCTGCCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //