Array 1 13245-13882 **** Predicted by CRISPRDetect 2.4 *** >NZ_QDAB01000018.1 Edwardsiella tarda strain RE-04 Edwardsiella-tarda-RE-04-contig-18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 13245 28 100.0 33 ............................ TCTTTCCCTATTCATCGTGGCGAATTGGCTGTG 13306 28 100.0 33 ............................ TTTTGAGCAGACGCTCTCTGGTAATAGTGGTCA 13367 28 100.0 33 ............................ CCCCTGTTCTAAAGGTTAGCGAAATCACCTTCG 13428 28 100.0 33 ............................ TTATCCACCTGCCAGATAAGGTGATCGCATACG 13489 28 100.0 33 ............................ TGGCTTCTCCGCCACCAGGTCGAAGCCAAGCTC 13550 28 100.0 33 ............................ TATTGGCTTCCAACTACAACCGCAGTTGATTTG 13611 28 100.0 33 ............................ TGTCTTGTATGAGTCATACCAGTCTTGGCCATC 13672 28 100.0 33 ............................ CGTGATGATCCCTACCGGTTCTTCCCCCGCCAG 13733 28 100.0 33 ............................ CGAGACAGCCTGGTGCTGGTTGCTCGCCTATCC 13794 28 100.0 33 ............................ TGGGGCGCTCCTCTTTCGGAACCGAGATACGGG 13855 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 11 28 99.7 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : GAACCTCTGTATCGATCTTGCCTTTTCCCTGACGCGTGAGATGGCGGGTCGTTATGAGAAGGCTCTGGTTTCATCTCGTTTTCGAGAGCGGGTGATAGAGCTGAATTTGCTCGCGAGTGTAGCCAGAGATATCCCCCAGCTATTTGGAGAGGCAAGTATTGATGTTGATAGTGCTCGCTAACGATTTACCGCCAGCAGTTCGAGGGCGAATGAAACTTTGGTTTATTGAACCGCGGCCCAACACCTTCGTCTCTGGTATCAAGGATTCGGTTGCTGACACAGTGATCGAATACCTTTATCAGCACTGTTCACCGGCAGCGGGTGTAGTGATATTTAAAAGCATGACTAAAACACCGGGGTATCAGATCCGAACCATAGGATCTCCGACCAAGACGCTCTGTGAGATAAACGGCTTGCAGTTGGTGGTAGAAAAGCGACTCGAGTAGTAAGTTAACCACAATATATCGTTGGTTTAGCATGCTCTTTAACAATATAATGGG # Right flank : CTGTCTAGCCAGCCGAGGCCATCCTTGATTGAAATGTCTACGCTCAAGCAGCAGCGCATTTTGACGCATGATGCGGTACACGCGTTTGGCATTGATAATGCCAATGTCGTCAGTTTGTGATTGTCTGCGCAGCAGTGCCCACACCCGACGATAACCATACGTTGGCAGATCGCCGATAACGGTATGGATACGGTCCAGCGCTTCTGGATCATCAAGTTTGCGCTTGCGTCGACGATCCTGTCAGTTCTTCGCTCGAAGAGCCATGGCATGCAGCTGCGCACATGAGACCCGGAGGCAACGGCTGACAAGGCTTATTCGCCATCCTCCGGTAACAAGGGCACGTTCGCTATCCACTTTTTTGGCGGCCATATTCAACGGCTTCTTTCAGCAGCTCGTTTTCCATTGTTTTCTTGCCCAGCAGGCGCTGCAGCTCTTTAATTTGCTTCATTGCAGATGCCAGCTCCGACGCGGGTATAACCTGTTCACCTGCGGCAACGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //