Array 1 687798-686809 **** Predicted by CRISPRDetect 2.4 *** >NZ_POUO01000001.1 Enterobacter bugandensis strain IF3SW-P2 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 687797 28 100.0 32 ............................ AGCATTGCCGGGACTCTCAGCGTCGAATCCAG 687737 28 100.0 32 ............................ TAAGCCCTGGAAATCAATCTGTCCTCCTGTGT 687677 28 100.0 32 ............................ TTTTTGCTCATTGGTTTTTCAGCCTCAGTCTG 687617 28 100.0 32 ............................ GTGGGGCTCGAAGCTCTGGCTGCTCAGCCGTG 687557 28 100.0 32 ............................ AGCCTGATGGCAGCGCCGCAGCATGAAGTGAT 687497 28 100.0 32 ............................ ATATTGATACCATCCTCTGTGGTGGCGCTATT 687437 28 100.0 32 ............................ AAGAGGCCAGCTTCGTGAATCTGGCTTACGTA 687377 28 100.0 32 ............................ ATAACCCGAATGTGTGAGCGGAGCCCCTTTAC 687317 28 100.0 32 ............................ ACGGAGTACAGGTCAGCAACGTCAGCTGACGG 687257 28 96.4 32 ........T................... ATATTCTGCTAAATCAACCCCGGCTCAAACGT 687197 28 100.0 32 ............................ ATGAAGTCATTTACACACATTCAGCAGAAGGT 687137 28 100.0 32 ............................ TACGCGATTCATCGGGGTCAGGGAAATGACAA 687077 28 100.0 32 ............................ GAAGGGCGTAATACTCCAGGCCAAAACGATAG 687017 28 96.4 33 .G.......................... AGAGATTGAACAGCTGAGTGACAAGCGTCGATT 686956 28 100.0 32 ............................ TACATCACAGGACAATCATCAAACTCACCAGA 686896 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [686871] 686836 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 17 28 97.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCATTAATCCCTGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGGATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCAGATGGAGTGGAATGGGGATTTTTTGTGCTGGGTGGTTTGTGAGAAGAACGATGTTTTGACCCTGATTTTTAACGGTTTTGTAATCCATTGATTTTAAATGAGTATTTTTGGTGGGTAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGATTAACCCGACCTTTTATATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTTCCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAGG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 698281-697351 **** Predicted by CRISPRDetect 2.4 *** >NZ_POUO01000001.1 Enterobacter bugandensis strain IF3SW-P2 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 698280 28 100.0 32 ............................ CTTAATTGTATAGGGGGAGCTATGAAAACGTT 698220 28 100.0 32 ............................ TATAACTATCAATATACAAAATAAATGGTGCG 698160 28 100.0 32 ............................ TAAAAAGATAAGAGCAATGTTCGTCGATGAGG 698100 28 100.0 32 ............................ AGATACAACAATTATTTTAACAGATGATGGTA 698040 28 100.0 32 ............................ AGGCTCAATGGTTCCCTGCATGCTATCACCAC 697980 28 100.0 32 ............................ GTCAGACGCTCAATCGCAAGCTGCATTTTTGA 697920 28 96.4 32 A........................... GAAGTATGGGTCACGTTTAACCCGTATTTCGC 697860 28 100.0 32 ............................ TCTCGCACAAGGTCATTGAGTGGAGAGTGACC 697800 28 100.0 32 ............................ CTCAAAATAAAAACCCTGGGCTAAATGCTCCC 697740 28 100.0 33 ............................ CGCAGCGAAGCGAGGACTCAAAAAGCATTACGG 697679 28 100.0 33 ............................ CAGCTCGCGCCTTCATGCGCTTACGCGCATTCC 697618 28 100.0 32 ............................ AAAGCGACGCACCAAAACCGGCAGTAGTCACC 697558 28 100.0 32 ............................ TGATCTGGTGTGTGCTGATAGTGTGTTTCACA 697498 28 92.9 32 ............G.T............. GCCAGGAATGCGAGATTGCGGATATCAGTTGG 697438 28 92.9 32 A...........G............... AGGACAGGCCCATATCACAGGATTTCTCTGTT 697378 28 92.9 0 A......................T.... | ========== ====== ====== ====== ============================ ================================= ================== 16 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCCCAAACGCAGCCCGTATGCCGTTGCCTCGGGGCTTATCTGGAAGAAGTTAAAACCGGCCTCACGGAATCCATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCATCTTACAGGACTGCTCCATGACATTACGCATTCTATGGCCGCAGATGTTGTTGCGCCTCAACGTGAAGAAACGGTAATTCACATTATTTCCTAAGTGCAATCCAGGGCGTCGGGGGCGTTATTCTGACGCCATTGGTTTATACCCTTTTTTCTGATGCTTACGTAACATATTGATTTATATAGTGCGGATTTACGTTCCAGAAAAAAGGGTTTTAGGCGTAAAAGTTGATTATTTTATTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : GCCCCTTTGGGCTTTAATGCCGTGGAAATGGCGTTACTATCTCACAGACAGTACAAGTAAACCCATCCCTCACAAATATTCACCTTGTCTATTTAAAAACGAAATACCATCATCCACACGCTATCCATTTTCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTTTAAAAATAATACTTTAAAAAAATAATGTGTTTTTGTTTAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATACCCGCATTCAATACCTTGAAATTAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTAAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGAAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAATA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //