Array 1 258868-261428 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRCR01000001.1 Aggregatibacter kilianii strain MELO_94 NODE_1_length_413872_cov_47.9553, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 258868 32 100.0 36 ................................ ATCAAATCCATCACCTATAAAAATATCAAGTAAAAG 258936 32 100.0 34 ................................ TTTTAAGTCCGGAATGTTTCGTTTGATGGTTATT 259002 32 100.0 35 ................................ GCTGTATTTGCATTGGGTCTAAGTTATTACATGAT 259069 32 100.0 34 ................................ CAACACATCACCATAAATCATGCTCACAGCTTTA 259135 32 100.0 32 ................................ GTATCTTTAATACTTGTTTTTGTTGCTATTAC 259199 32 100.0 34 ................................ ACCGTCACTAAAGTCCATGCTTCCGGCAACGTCT 259265 32 100.0 34 ................................ CTACAAAAACAAAATTAAATAAAACAAAATTAAT 259331 32 100.0 36 ................................ CTCAGTTATGTTTTCAAGTCCTTTCTTTATAAGTAT 259399 32 100.0 35 ................................ TTCTCGTGCTTAATCCAAGCATTTACGGCTTCTTG 259466 32 100.0 33 ................................ ATGGCGTTAAAAACATACTTCGGCGTTTGCCAC 259531 32 100.0 36 ................................ AGGAAACAACTCTTTTTTGCTTAAGCCGGTCACAAT 259599 32 100.0 34 ................................ TTTGAATCCTGTCGAAAAAATTACCGCACTTAGT 259665 32 100.0 36 ................................ TTCCGGTAATGGTAAAGGGTCGGGCATTGGAGATAA 259733 32 100.0 35 ................................ TCCACCTGCTGATAATGGAGGTTTTGACACTTCAA 259800 32 100.0 32 ................................ TTTATGGATTTTCACATTGACTGGCTCACAAT 259864 32 100.0 36 ................................ AAAACCACATCACTACAACCCTTGCCATCAATGCAA 259932 32 100.0 34 ................................ GGCAATCAAGTTCAACTTGATTTTTATCAATCTG 259998 32 100.0 34 ................................ CGGTAAAAATTTTGTTAAAGATTATAAGCGGATG 260064 32 100.0 33 ................................ TTCATCTTCCGGTGATGGTAAAGGGAATGGTGT 260129 32 100.0 35 ................................ ATTGTTTATGTATAAACCAACATTATTATTTGGAT 260196 32 100.0 34 ................................ TTCGCACCGGCAACTACCGGGGTAAAATGTACTA 260262 32 100.0 34 ................................ ATACGGCGTATGACCGCCGCCACCTCCACCACCG 260328 32 100.0 35 ................................ CCGAATTTTGAACGTGATGATTACTGGTGGGAAGA 260395 32 100.0 35 ................................ TTCAATGTCCATAAATAATTCGTGCTGCGCTGTAA 260462 32 100.0 36 ................................ TACGGTGATTTTGGCATCTGTCACGTTATCCCAATC 260530 32 100.0 35 ................................ CACACAATTTTGCGTTTTTCCACTTCCGTTGCTGT 260597 32 100.0 36 ................................ AAGTATTGAAATTATGCCGAACTTTCGCAATAGCGG 260665 32 100.0 35 ................................ TCATCAATAAGACGTTGTGCATCTGAGAACAAGGG 260732 32 100.0 35 ................................ TAAACAAAAATAGGAGAAACATAATGAATCAAGAA 260799 32 100.0 37 ................................ TGGCCCCCTTTGATTGAATTGCATTAAGTAGCTCCAA 260868 32 100.0 34 ................................ GTTCGTCTCGCGGTCTGAACCCGGTGCGGTCAAC 260934 32 100.0 35 ................................ TCATCAATAAGACGTTGTGCATCTGAGAACAAGGG 261001 32 100.0 32 ................................ GCGCCGTGCTCAATCTTGGCAGTGCAGACAAA 261065 32 100.0 34 ................................ GGGTGTAACAGAACGCCCCGAACTTCTTCGAGCG 261131 32 90.6 35 ..........T..G.T................ GCCAAAGGTGACCGTGGCAAGGCACATGAAATCGC 261198 32 90.6 34 ..........T..G.T................ CAGTATTTAAGTTAAGGTGTTTAAATTTTATAAA 261264 32 93.8 35 C......T........................ AGGGTACCACACCACCCCGCCGTGCCAGCCTTTAT 261331 32 93.8 34 ..........T..A.................. TCAAAGTAGATCACAAAGGTGGTGAGCATACCGC 261397 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ ===================================== ================== 39 32 99.1 35 GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Left flank : TTGATGAGATAAACCATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGTCATATCGCAAAACATTGCTTAGATTACGGCGTACGCGCGCAATATTCGGTATTTGAATGTGATGTCACGCCTGACCAATGGGTCATGTTGAAAAACAAACTGTTGGAGACCTACGACCCTACATGTGACAGCCTGCGTTTTTACCATTTAGGCAGTAAGTGGCGCAATAAAGTGGAGCATCATGGGGCAAAAGGGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGCTCTCATTAAAACCCTGATGGGATAGCGATCTTTATTTTCTTTAACAATTTGGATAAGTTAATTTATTTGTATAACGGCGGTATGGCCGTTATACTTACTAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATCTGCTGATTTTTCTTGCTTTTTTAGCTAGGGA # Right flank : CTAACGCTTATATATCAATAAGATCAAGTAAGATCGCAGCCACCTTTGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATGTATAAGTTTCAAGCTTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTTGGGTTAGATCATTTTAACCGCTCTTTTTATTTATCTACGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCAGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGCCGCTGCATCGCCCACTAATTCAGGATTATGCACAGTGATACGTAAACGGGTCATACAAGCATCTACCTCGGCAATATTGTTTCGTCCGCCAAGAAGATTGATGATTTGTACCACTTGCGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //