Array 1 101562-102918 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBFG01000020.1 Streptococcus mutans strain PKUSS-7 C277, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 101562 36 100.0 30 .................................... GCTTCACTAAAACTCATAGCATATACTATA 101628 36 100.0 30 .................................... TTGCATTAAAATTTTGTCCTTTCGTCTTTT 101694 36 100.0 30 .................................... CAACAGCTAAAGATGTCGTTAAACTCACAA 101760 36 100.0 30 .................................... TTGTATACTCGCGTGACTACCGAAAATCTT 101826 36 100.0 30 .................................... TCCTAGAATCCAATGTTCGGCTTGGAGCAT 101892 36 100.0 30 .................................... TGACTTAACATCTAGGTAATTAACCCCAAT 101958 36 100.0 30 .................................... AGCGGTCCTCAAGGAACAGGTGTGGCACGC 102024 36 100.0 30 .................................... AAAAGCTAAAAACAAAGATATACTTGATAG 102090 36 100.0 30 .................................... GCAAAAAAAATAAGTATGTATTAGAGGAAG 102156 36 100.0 30 .................................... AATCGCATTCAAAGGGACTTTGAAAACACG 102222 36 100.0 30 .................................... TTTCCTCTGCGCGCAACAATCGCAATGTCG 102288 36 100.0 30 .................................... TTACTTTCAATGCTTTAACTGCATCTTCAT 102354 36 100.0 30 .................................... GTCAAAATCTGTGTATTTTATCATTTGAGT 102420 36 100.0 30 .................................... ATTTAATTAAACACAAAAAAAGATATAGTC 102486 36 100.0 30 .................................... TAGCTTGACTGACAACACTAAGCGTTATCT 102552 36 100.0 30 .................................... TGTACAGAATGCAAAATAAAAAAGATGAAA 102618 36 100.0 30 .................................... ACTTTTTAATAACGCTTCTATGGAAAAGAA 102684 36 100.0 31 .................................... TAAAAGGTGTTGGTAAGTTTGCTGGTGGTGT 102751 36 100.0 30 .................................... CGTTGTTAAACTCACGACTGATGTTGACCT 102817 36 100.0 30 .................................... AATAGAATCAAATTCTCCTAAGTCAGTTAA 102883 35 75.0 0 ..........CA.......A.TG..-T.A.T..... | A [102899] ========== ====== ====== ====== ==================================== =============================== ================== 21 36 98.8 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGTGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAATCGCTAGAAAGATTGATTTCTAGCGATTTTTTAGGTATAATATCAGCAATCAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATGAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG # Right flank : CGCATTATGCGAAAGATTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTTTCGTATTGACGTCCAAAGGTTTGATACAAATCCTTAGCTTTTATCACATTATCCCAATGAATAAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //