Array 1 64235-66155 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHXA010000028.1 Citrobacter europaeus strain Survcare154 NODE_28_length_86668_cov_9.86545, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 64235 29 100.0 32 ............................. GGTATTAATTAATAAATTATCAGGGATAAATA 64296 29 96.6 32 ............................T TTGACGATAGTCAAAAGTAGGCGTAAAAACTA 64357 29 100.0 32 ............................. AAACGCGGCCCTCACTGGTATAGACCAGCCAG 64418 29 100.0 32 ............................. CCATTCCCCATCAACCTGATCGCCGCTTTCTT 64479 29 100.0 33 ............................. TGCTGAGCTTTAATCTTAAAGCGGGGGATCCGG 64541 29 100.0 32 ............................. GTTTTCATGAAGGCAATGAAAGAAATCTTGAT 64602 29 100.0 32 ............................. GCGTAATTCTTGAGGTTAACACCCTTACCGAC 64663 29 100.0 32 ............................. GCTGGCCGGGGATCAAGGAGTGGGTTGACGCT 64724 29 100.0 32 ............................. GGAAAAGCCGCATTAGTTGCTCGCGGTCCGGG 64785 29 100.0 32 ............................. ATAGCTTTCTGTATGTCGGTATAGGTCATATA 64846 29 100.0 32 ............................. TTCACAGCTTAATCCCCAATTCGTCCGCCGCA 64907 29 100.0 32 ............................. TTGATGCGGTAGCGCCTGAAGTGCGTCAGTTC 64968 29 100.0 32 ............................. CGCCGCGAAAAGAAATCAGAGCAGATGATTAA 65029 29 100.0 32 ............................. GACTTTGAAACGGCACTGGAGAATTACAGGGG 65090 29 100.0 32 ............................. TGAGTCGGTCCAGCGTCTGGAAAACCTCCTGA 65151 29 100.0 32 ............................. GGGTGTAGGGGCCACTCTCGGCCCCTTTATTA 65212 29 100.0 32 ............................. GGCATTTAAAAGAGCTTCTAACTGACTTTGAT 65273 29 100.0 32 ............................. GCGCTGGGCAATATTCCTGACGATATCCGTGT 65334 29 100.0 32 ............................. CGGTCATACGGCACGATGGTCGCGGTAACGGT 65395 29 100.0 32 ............................. CCTGCATCAGCGATCATTGATGTTGCAGGGGT 65456 29 100.0 32 ............................. AATCCCAGAAGATGCAGCGCCCCGGCGCGCTG 65517 29 100.0 32 ............................. ATTACCGCAACCTATCTTAACGGGCGCGGGAC 65578 29 100.0 32 ............................. TAGACCGAATCGGACGTGTCGAACGCCTCCAA 65639 29 96.6 32 .........................A... TGCGGCGCGTCAGCCCAAGTTGCTTTTTGGAA 65700 29 96.6 32 .........................A... ACGTGTACTGTAACGGATGCTCATGGTAATTC 65761 29 96.6 32 .........................A... CCAGCAATAAAGATTTTTTGTTCTGACATTTT 65822 29 96.6 32 .........................A... CGACAACTAACACTATGTATGATTTGGCTTCA 65883 29 96.6 32 .........................A... CAGGTCAGCCAGATCGATTTCATCATCCAGCC 65944 29 93.1 32 ............T............A... CAAAATAGCGAATCTTAGTGGCACCGAGCGCC 66005 29 96.6 32 .........................A... AGGAAGGGGCGGGCCGCGTCATTGTGACGGCT 66066 29 96.6 32 .........................A... AGAGGTATTTATGAAAGGTGCATTAGGCAAGA 66127 29 96.6 0 .........................A... | ========== ====== ====== ====== ============================= ================================= ================== 32 29 98.8 32 GTGTTCCCCGCGCCAGCGGGGATAAGCCG # Left flank : GTGCTTGCTGCTGGAGAGATTGAACCGCCTCAGCCTGCACCGGATATGCTGCCGCCAGCGATACCGGAGCCAGAGTCGCTGGGTGATAGCGGTCATCGGGGGCATGGTTAATGAGTATGGTGGTTGTGGTCACAGAAAATGTACCGCCGCGTCTGCGGGGCCGCCTTGCCATCTGGCTACTGGAAATTCGAGCAGGTGTGTATGTGGGCGATACTTCGAAGCGTATCCGGGAAATGATTTGGCAACAGATCACACAGCTTGGTGGTTGTGGAAATGCCGTTATGGCTTGGGCGACTAACACAGAATCAGGATTTGAGTTTCAGACATGGGGTGAGAATCGGCGTATTCCGGTAGATTTGGACGGGCTGCGTTTGGTTTCTTTCCTTCCTGTTGAAAATCAATAGATTACGAGTTCTTTAATAATATGGAATTGTTATCTAAAGGTTGGTAGGTTGTTTTGTGTTAAAAAAATCCTTTTGGAACAAGAGTATAGTTTTAGA # Right flank : GGAGGCTATCGGCACGCAGGCAAACGCCGTGGGGTGTTCCCCGCAGGCTCGGGGCAAAAATAGCCTTATAACTTCACCAAAAGTGGACTAAGAGTTTTTACCCGCTTTTGCCAGTTCCTTTACCAGCGGCAGCATAATGCGTACCACGTCGCGGCTACGGCGTTCTATCCTGCCCGGTAACGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGGTTCCAGTTGGTCGCTTCAACGGAGAGAACGGAAATGCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTGCCTTTCGGATAGTCTTTGTTCAGACCTGGATTGGTGCTGGCAACAATACCGCGACTGTGTGCGATAGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAGCCG # Alternate repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //