Array 1 7639-6491 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHVS01000031.1 Microcystis aeruginosa NIES-4264 contig_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================================== ================== 7638 36 100.0 36 .................................... CAGTCGCATTCATTTTCCCCATATGCACCCAGAAAA 7566 36 100.0 36 .................................... CCAGGATACGACAGGGGGGATGACCATGAAGCAAAT 7494 36 100.0 36 .................................... TCTAGAAAGAAAGGTAGAGCGGAGTTTTTACGAGGG 7422 36 100.0 36 .................................... ACAAGTATTGAATCCGGAAATCTTGGAGAAAGCCTT 7350 36 100.0 34 .................................... TCGTCCAACCCGAAAATGTGGTTTTCTTTTTAAG 7280 36 100.0 37 .................................... ATTTCGAGCAAGTACAACAAGTCTTAATCGAAAGCAG 7207 36 100.0 35 .................................... AAGATGCGGGAGATCGGGCAGCAGAAAGGGGAAGA 7136 36 100.0 51 .................................... ATTTTTAGGCACCCTGCCTAAATTCCCCGCCTAATCGTTTTCTTTTTCCTC 7049 36 100.0 38 .................................... CGGTTTTTCACCGGCGCTTAGACGCTGGCTACGAAAAT 6975 36 100.0 36 .................................... GATATTCCTGCCCACCGCAAGAATAGAATTTGGAGA 6903 36 100.0 34 .................................... GAGAAGGTTCGTGTGACAGGTGAGTGGTTAAAAG 6833 36 100.0 37 .................................... AGTACCCAGGGGGACAACGAATAGGGGACGACGCCAA 6760 36 100.0 37 .................................... ACCCACACCTTGGTCTGGCAATCAGGGCCGCCCTGAA 6687 36 100.0 51 .................................... ATTTTTAGGCACCCTGCCTAAATTCCCCGCCTAATCGTTTTCTTTTTCCTC 6600 36 100.0 38 .................................... CGGTTTTTCACCGGCGCTTAGACGCTGGCTACGAAAAT 6526 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================================== ================== 16 36 100.0 38 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : TTTAATTATCTATTCGCCAAGGCTGCCAGCAAGGGGAGAGCAAAAGGGAACGGTGAGCATTTCTAAGACTGCCATGACTTTTTATTGTTAGGAATCCTAACGGATTGCTGAACATATTACTGTCTTAACCATGTTTCCAGTTTTAGCGAACAATCACGCCTAATTGTAGCATTTTTATCGATTTTTGTCAAGATATATTTGATAGAATTTATGATAAAAAGGGTTTCCAATTAAAGAGGGCGAATGCAATTCGCCCCTACAATAATAATATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGTAGGATGGGTTAGCGGTAGCGTAACATAATAGGGCGTTGGGTTGAAGCATGAAACCCAACCTACGTTCATTTTATATTTAATTCCACCCACCTACTTATAGATATTTCGACAAAATTGAAAGGCAGAAAAAGGGTTTCTTTATAAACCCTTTTTCTA # Right flank : GATATTCCTGCCCACCGCAAGAATAGAATTTGGAGAGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGACGCTGGCTACGAAAATGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGGATATTCCTGCCCACCGCAAGAATAGAATTTGGAGAGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGCTCATCAATAATGACAATCGCCGTGCTGTAGCTGAGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGTCTAATCAATAACGACAATGTTGGCAATTCTTATTAGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGTCTAGAAAGAAAGGTAGAGCGGAGTTTTTACGAGGGGTTTCCAACTAATCCTATTTGA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 25443-24964 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHVS01000041.1 Microcystis aeruginosa NIES-4264 contig_41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 25442 36 97.2 39 ............C....................... GGCAACTAATAATACTCAATAAAACGCAGCAGTATTGTC 25367 36 100.0 42 .................................... CTAAAATTATAGGGTAAGGTCTAAGACGATTCTGTTACAAAT 25289 36 94.4 32 .......................CT........... GTAGGGTTAATTCATGAATTAACCCTACAAAT 25221 36 100.0 37 .................................... GTTCATTAAGAAAAAACACAAACATATTAGGAGTACA 25148 36 97.2 37 ........................T........... GAAAAGCCTCTAAATACCGGTTCGCCCTCGACCTTAT 25075 36 86.1 39 C...........C.............TA..C..... GTCGGGCAGTTGAAAACTTGAAGTCGGGAGAATCCATTT 25000 36 83.3 0 ............C........T..T.A.TA...... | C [24978] ========== ====== ====== ====== ==================================== ========================================== ================== 7 36 94.0 38 GTTTCCATTCAATTAATTTCTAAGCGCGAGTAGAGA # Left flank : GACGGCCGCAAGGAGCCTAATACAGTTCAACTGTAACAAAACTCGCTCGTTTCTTACCTAGACCTTTGCCAGTCCGATAAGTGTCTTTCAGTAAACTGCCTCGACCCGCTGCGAGCGATTGTCTGATAGTTTCTTCCGCCAAATAATCCTAAAAGTGTCGCCCAGTAAGCATTTTACTATAGCTTTTTTCAGTCTGCTGAGGTACAAAATTTCTGGGTTTTAGGCAAAGGGGAAGAAAAATAGCTGTACCTCACTAGCTTAGGAAACGCTATATATAAGTACCTAAGCAAAATTAATTACACATCCAAATCGTCAGCAGTTACTCCGTCAGCTTTTTGCTGTGATCAGTAAACAGTGAACTAAAAACTCAAATCTGATCCCGTCTCCTGTCTCCTGTCTCCTGTCTCGACTGGGAAATTAATTTTGCACGACTACTTATTTAGGGTTTCCGGCAAAAAGTTTAAAGAAGATTTAATCGCACTGGTGGGAGTCGAGATTTT # Right flank : TGGGGTTAATGTAACATTACTATAAATATCTTGTCAAGTTTCTATTCAATCATCCTATAAAGTCGCCCTAAAAGGGCGAGGCTTTAAACCCAATTTTTCGGTAAATCAGCCATATAAACCGCCAAAATCTCCAGACTGTGGTAGATCGAGGGATTTTACCAGAAACCGAGGTTGTCTGCTCCCAACACTATCCAAAGCTAATAATAATCATATAAAAAAATCTATACCACCAGAAACTTAGACAGGATCAGCTTTTGAAGCTTTTTAAAAAAAATCTTCAAAATATCGTGTTATCTCTAGCGGTTCCTAGGGCATATTGAATATAGTGGGAACATCGGTCAGCAAGGAGTTGAGGCGTTTATGGCCCTGGGATACTGGCAAGCGAAAATCTGGGGATTACTACACGATCCCGTCTTCAAGGCCCTACATAGCAACTCAGGACGCGGTGATAACAGCTTCTGGAGAGATTTAGAAGTAATGAAGTTGTGGGGAAAACATAA # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAATTTCTAAGCGCGAGTAGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 23678-25993 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHVS01000049.1 Microcystis aeruginosa NIES-4264 contig_49, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================================================================================================================================================================== ================== 23678 35 100.0 35 ................................... GATAAATCACGCCCAGGAGGGCGATAATAATTACC 23748 35 100.0 41 ................................... GCGCTTAGAAGCACACCGAACAGTACGATTCCGCCGATCAA 23824 35 100.0 43 ................................... TTTCATTATGGTCAGGCTTCCAAGATCGCCCGCCGTCTCAAAG 23902 35 100.0 35 ................................... TTCACGCAATTCAGTTAGCTTAAAGACATTTAAGC 23972 35 100.0 35 ................................... GTTGAAATCTGTGTTAGCCATTTTGCCCGATAATC 24042 35 100.0 42 ................................... GCGCAAGAAAAAGAACCAGTAACCACCACCTAAAACAGCAAT 24119 35 100.0 38 ................................... CTTTTTCTTCGCTTGCAGTAAAAGAAACGTTCACTGTT 24192 35 100.0 38 ................................... AATTTTAACAATCGGATGGGCAAGGGGGCGCAAGTCTT 24265 35 100.0 34 ................................... GGCGAGATACATCAGGGCCAAAAGGACCAAAATG 24334 35 100.0 40 ................................... TTTATCGAGGATAAACCAAAAACACACGGGGTGAATTGGA 24409 35 100.0 36 ................................... AGTTTGAGTGGTGGTTAGCCATGGTCAAAAATGCTT 24480 35 100.0 35 ................................... TCAGGTTGCTCTCGGCAGGGGTTTCAATCCGGATT 24550 35 100.0 44 ................................... CTGCATTGATACCGGCACTCTTGATGGCAGACAGGATGTCACTT 24629 35 100.0 36 ................................... GGCCTCTGCTTTTTACCGATGCCTGCCGTTGTGCAA 24700 35 100.0 37 ................................... ATTTCATGCAGAGAGTATTGAGAGTATTGCTTCTCGG 24772 35 100.0 39 ................................... TTTCTAGATCGTCGAGTACTGAACCTAGCATTATTACAC 24846 35 100.0 41 ................................... CCTCCTCGTGGGAAGGGATTATGACACCGTTGTCAGCGATA 24922 35 100.0 31 ................................... CGCCGACCTTGGTTAGCAAGACGGCCACCGT Deletion [24988] 24988 35 100.0 41 ................................... GGTTTGATCCCTTGTTTGCAACTCCCTTCGGAGGGAGGTGT 25064 35 100.0 42 ................................... CTAGAAATACTAAGCTGCGCACAACGACCCGAAATAGGCAAA 25141 35 100.0 48 ................................... GAGCAAAGCGGGTCTCACGAACACGATTTGCATCGCTAAAGAAAACAT 25224 35 100.0 41 ................................... CGTTTCTTAGCCCGGCGGCCGTTATAGCATTCCCAGAGACC 25300 35 100.0 35 ................................... TTCACCCAACTCTTGGATTGCTCCAAGCAAAACAT 25370 35 82.9 181 ...........................GG.TCTG. GGAAAAAGTAGGGGCGAAGCATTCGGGCAATAACCTATCGGTGAAACCGGAGATTTTCTATCCGAATGCTTCGCCCCTACAGGACGCGGGCCGATGAAGACGCCAGGTTTTGAAGCACGATTCTCTCAAAATCTTGCACCTGTGGGAGCAAGAAAAGCCACAAAACCCTTACCATGCCTAC 25586 35 80.0 40 A...C..T..A.....C..CC.............. GTTTTTGCTAACCAATTGTTAGCTTTAGGAACCCTCCAGA C,C,C [25591,25599,25606] 25664 35 100.0 41 ................................... CATCCAACGGAGTAGGGGCAATTCATGAATTGCCCCTACTG 25740 34 82.9 182 ..........................-.G..TCTG CTGAAAAAGTAGGGGCGAAGCATTCGGGCAATAACCTATCGGTGAAACCGGAGATTTTCTATCCGAATGCTTCGCCCCTACAGGACGCGGGCCGATGAAGACGCCAGGTTTTGAAGCACGATTCTCTCAAAATCTTGCACCTGTGGGAGCAAGAAAAGCCACAAAACCCTTACCATGCCTAC 25956 35 80.0 0 A...C..T..A.....C..CC.............. | C,C,C [25961,25969,25976] ========== ====== ====== ====== =================================== ====================================================================================================================================================================================== ================== 28 35 97.4 49 CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Left flank : TATCTGAAGAAAAATCGGAGTGCTGATGCGAACACCGAAAGGATGATGAGAGATCAACCCTGAGCAACAAATACAGAGCTACCAGAGTCTGCTGCTATTAAGGTAAAGCAACTAAAATATCGGGAGCATCTCATTTATGCAAGTGAGTAATTATACTTGTCCTAACACTGATTTCTAGCAAGGCTTTCAAAATAGCTTGACATAAAGATTTAGGGGTTATAAAGGTGAGATGCTCCCGATCGCATAGGCATTAACGTGGAACAAATTCTATTGTTTTATGCCGATGGAATGGGGGGGTTCTCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCTTTGCCCAGCAAGGCTTTGAGCCTTATGACTGAGGGAACTATTGAGAATCATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATTGCTGTACAATCCTTGTACAGCCTAGTTTTGCCAAGCTAGT # Right flank : CGTTTTTGCTAACCAATTGTTAGCTTTAGGAACCCTCCAGACTTTTAACTTCTTAGCAAGTTTAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAAAACCCTTACCATGCCTACATTTCACATTTATTCAGCCAGCCCTAATTAATGGAAACGTTTTTGCTAACCAATTGTTAGCTTTAGGAACCCTCCAGACTTTTAACTTCTTAGCAAGTTTAATTTTTAAAAAATCTCTGAGTTGGTTGGCATCGGGCCAATTTACTGAATTTGCATAGGGTTTAATGAGTTTAATTGTTGAATAAATGTAGCGCGATCGCGCTGGTTAACTCCAAAAATTGTTACTGTTTGATAAGGTTCCTGTTGTGGGGGAAAATTAGATTTAATTAACACATAAGAAGGTGTAGAAGCAGTTTCTCCTCGTTGGCTG # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.52, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //