Array 1 6552-5207 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKFR01000012.1 Capnocytophaga sp. oral taxon 335 str. F0486 ctg120006998334, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ===================================== ================== 6551 46 100.0 30 .............................................. TCTTTATCGAAGTTGAATAGGCGAGAGTAG 6475 46 100.0 30 .............................................. AATAGATGGTAGAGTGCGAAAGGGTACGCT 6399 46 100.0 30 .............................................. ACATTAATCCTACTTCAAGCGGAGTTAATG 6323 46 97.8 30 ..................T........................... GTTGCATTTCTCTACCATTCTTAGCATCAG 6247 46 100.0 30 .............................................. AGCAGCTGCACGGCGTTCTGTCACATCTTG 6171 46 100.0 30 .............................................. CTATTCTATAACCTAATGGCAGAGCAAAGT 6095 46 100.0 30 .............................................. CCAACGCTGACAGAGGAAGAGTACGAGCGT 6019 46 100.0 30 .............................................. ACTGAAAGACTTCTTTGTCAAGAACCCCCT 5943 46 100.0 30 .............................................. AAAGTGCCTTTTATAAAAATTGTAAATCTA 5867 46 97.8 30 .....................C........................ TCACTTGGCAAATCCCGAATAACATTCAAC 5791 46 97.8 30 .....................................A........ TTATCTTAGACGAAAATGGAAAAATCATTA 5715 46 95.7 30 .......................A........T............. GTGGCAAAGTAGAGTTAGGCAAGTCGTACC 5639 46 95.7 37 ................................T.........T... TCCGTCGTCCGTCGGCTAAAGAATTGGAACATTTAGA 5556 46 97.8 30 ................................T............. TGGTAGCCCCCGAAGCAGAGATGAAAGTTT 5480 46 97.8 30 ................................T............. TTATCCTTGATATGAACATTCTGGTCTGCT 5404 46 97.8 30 ................................T............. ATAGCTGCATTAAGAGTTGATGCGCCCTGC 5328 46 97.8 30 ................................T............. CAATGAGTGATGATATAGTAACGGCTGCTA 5252 46 97.8 0 ................................T............. | ========== ====== ====== ====== ============================================== ===================================== ================== 18 46 98.5 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Left flank : AAAAATAATTACTTATGAAAACACTTCCACATTCTCCAACCTATTACACCCGCCAGCAGTACCATCAATAGCCATACCCACCAGCTAACAATTCCTTTCACATCTTTTGTTTTATAAGAAAAAACCGTCGTGCTTTCTGTATTACGTAATTCATTATTAGTTGTGCTTATAGTATTTGTAAGGGTAGTATTCGCCACTATTTGGCTATTGGATAGGCTACTTTTATTCGTAATCTTCACCTTTCCACCTCTTACCCTTATAGTTTCATTATTGCCTTCACGAATTCGAGTATATGTAAGCTCCTTGCTGTTTCCTATACTATCCTTATCGCTCTCTACTGTTACCTCATACTCTTGCGAGGCGTGTGTATCGAGTTGCAAGGTTTGTTCGTTTTGCTGAAAAAGAGCTGTACTATCCTTGTACTTTATAATACGCTCTTTTTTGACTTGCTTTTGCTCGGTAGTAGTTGCCTTACGAGCCCTGCACCTCAATAGACCAAG # Right flank : GCGTGGGCATATTTTGGAACAGTTTGGGTAGTGGGGTCGGTTATTTTGAGTTGTTTATCTTTCAACTTCAAATGGGCAGGATTGCCGATGTAAATAGAACGGTATAACATAGTTTAAAGGGTGTTTTATTGGTTTTTAAAAAGGGTTTTTAATATTCACCTATGCTTACAATATCGCCTAAGTGATTAATACGGACTTTTACAATATCTTTTAATCCTGACAAACCTTCTCTTTTCCAAGTAGTATTTTTTAAAACATTATCTGTATCTACATTAGTTTCTAAATGATGCCTAAAAAAATAATCTTTAGTAGCTATTTTTTGTACTCTAAACAAGTTAGGACTTATCTGTTTTTTGTTCTTAGGATCTAACAAATCTATTTCGGCAGGATTGAATCCTGTTGCTTCGTTAGGAAATACAAACATTTCATTCTGTTTCATCGTAAACAGAAATTGCCAACCTTCTGCTTGTTTATAGGTTTTATCAACAATAGGAAGTCCT # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Alternate repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 8246-7896 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKFR01000012.1 Capnocytophaga sp. oral taxon 335 str. F0486 ctg120006998334, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 8245 46 93.5 30 A.....T...A................................... CACCATCAAAGGCGTGGAATGGAATAGCGT 8169 46 100.0 30 .............................................. ACGATTAAAATTTACAGAACAATGAAAAAA 8093 46 95.7 30 ..........................A.....T............. TCACCTACGGCTTCCGCGTTATCGACAATT 8017 46 93.5 30 .........................GA.....T............. GTATTGCAAGAGCATTTATAGCGAGAAAGT 7941 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 5 46 96.5 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Left flank : TGGTTTAAAAGTAATTAGAATAAACGCATCTTCACTGTACATTCTGTATACTACAGATGGAAAGACCTGGATTGCTAACGCAAAAAGGTAATTCTGAAAAAGAAGTACTAAAAAAACCCCGAAAATATATATTTTCGGGGTTTTTTCATTTTTAATATGTGCTCTTCCTTCCTTATTACTTCTTTTTAAATATCAAATTTATCAAGAATAAAATAACAATAGCTCCAATAGCTCCTGTCAAGATAGCACCAATCCATCCTCCTCCAAGTGAGACGTGAAACACATCTCCTAAAAGCCAATATCCCACGATACTTCCAAGAATACCAATAATGATATTGCCTATAAGACCTAGTCCACTACCTTTATAGATAGTTCCTCCTAACCATCCAGCGATGGCTCCAATAATAAGTGTTGCGATAATACCCATAATTTTTAATATTAATTAGGGTACAAAGGTAAGAATTATCATCTAAAAAAACAAATAAAAATCATAACATTGT # Right flank : GCGAATACTGTCATTCTCTAAGTCCAAAATACGAAGATTTTAAAATTAATCTTCACGAAGTACGCTTTCTGTACAACGTCATAGAAGTACGCCAAAAAGGACGTAGCAAACGCTCTAACCGTGCCAAAGATTTTTTATAAATGAGTATTAATTTAAAACATAATATACCAATGAAAAAATTTATTCTAACACCCGTGATTGCCACACTACTTATTTCCTGTGGCTACAACCGTCAAGAGCAAATGTTATATGATTATGTAAACGACGGTACGCAAAAAGTTATAAACGCAGAGGCTAAAAATCTTGGTTTCAAAGTTAAAGAAATGAAGAAAATTAAAGAGATTACTTCTAATGATAGTCTTTCAATTTTAGAAAATAGATTATCTAATGTAAAAAAAGAGCTACTTCCAGAAATAAAAGAGAGTTTAGTTACCGCTCGTCACTTAAAAGAGACCACAGAAAATAATCTAAAAGAAGCAATGAAATTCTCTACTCAGGAA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //