Array 1 4136-740 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDQK01000014.1 Macrococcus caseolyticus strain DPC7170 NODE_14_length_42048_cov_22.1969_ID_1813, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 4135 36 100.0 30 .................................... AAGAACACCTATGTCTCAGCCACCAGCGAT 4069 36 100.0 30 .................................... TAAAGAGCATGGTCGTACCTGTCCACATTG 4003 36 100.0 30 .................................... ATACTCATCAGAAACCTTATTAGTCCTTTT 3937 36 100.0 30 .................................... TCTATTTAGTAAACTCATAAGTTCACTCCT 3871 36 100.0 30 .................................... AATAAAATATTCGGTTCATTTAGAGATACA 3805 36 100.0 30 .................................... TCACGAAATGAGCTGCTATATGAAGTTGGA 3739 36 100.0 30 .................................... AGTAAAAGAACATAAAGTGATGAGGAGAGA 3673 36 100.0 30 .................................... AGGCAATCAGTGGGGGAACGCTAACTTAAT 3607 36 100.0 30 .................................... AAAGGGAGATACCTATGTCGCATTAGACGT 3541 36 100.0 30 .................................... AACAGAAATGTATCGTATGACTACAACTGA 3475 36 100.0 30 .................................... AGCAGCAGGAGCAATAGCACCGAGCAACGC 3409 36 100.0 30 .................................... TGCTGCGTTAGGACTATATGGTGTTGTCAT 3343 36 100.0 30 .................................... ACCGTCAATCTTTGGAATGTTCTTTGTTAT 3277 36 100.0 30 .................................... TTATCTTTTGGTGATGTATCCCCACTGAAT 3211 36 100.0 29 .................................... TTTTAGACATTACAAGATACGCCGGCTCT 3146 36 100.0 29 .................................... TGTTTAGAATGAATATTGACCCTTACACA 3081 36 100.0 29 .................................... GTCCTTATAAAGTCGCTCGCACTCTTGAA 3016 36 100.0 30 .................................... AAGATTTTAAGGGTTAAGATTGATAGAGAC 2950 36 100.0 30 .................................... TCAGTATTTTCGTTTAAATGTACGGAATTA 2884 36 100.0 30 .................................... ATGCTGTAAATAATTCAGTTCAACACGATC 2818 36 100.0 30 .................................... AAATCTTATCATGGATTATGCGGTGAAGAA 2752 36 100.0 30 .................................... TCTGTCTTATACGATATGTCAAAGCTGTTC 2686 36 100.0 29 .................................... ATTGGCGATGGCCGGTGCACATGCTATTA 2621 36 100.0 29 .................................... GCAATAAAATAGGACTTCGCTAATTCAAC 2556 36 100.0 30 .................................... ATCATCTGATGGCGTAGAACAAGGACATGT 2490 36 100.0 31 .................................... GTGGTTATGCGAATGGCGGTATCATTCCTAA 2423 36 100.0 30 .................................... TCGGTAGATTATCTCACGCAAGCATTCACT 2357 36 100.0 30 .................................... TCACCAAACGTCCATTGTCTACTGTAATCA 2291 36 100.0 30 .................................... AGACGGATTCGTTCGTGAAGGGTTCATGGA 2225 36 100.0 30 .................................... AGGCAATCAGTGGGGGAATGCTAACTTAAT 2159 36 100.0 30 .................................... AGCCGAAATATCAGAAGACATTAAAAAAAT 2093 36 100.0 30 .................................... AGCCGAAATATCAGAAGACATTAAAAAAAT 2027 36 100.0 30 .................................... CTGCTGAGTAGTAGGTTCTTTTATTATAGG 1961 36 100.0 30 .................................... CTTGAGCAATTGGAATTAGCTGAAATGTTA 1895 36 100.0 30 .................................... TTTCACGTTGCCCATTCCGACTTCACGAGT 1829 36 100.0 30 .................................... ACGATTTAGAAAATAGACTAAAAATATTGG 1763 36 100.0 30 .................................... AAAATAACAGAAGAATTAGTTTATAAAAAG 1697 36 100.0 30 .................................... TAGGTTTCAACCCACGGCCTTATCATGCAT 1631 36 100.0 30 .................................... TCTAACTGATTCTAACAGTTGAGTAAGTGC 1565 36 100.0 30 .................................... GGTTAAGACGAACTGTTCTATTGCAACGCT 1499 36 100.0 29 .................................... ACAAGATAGCAGTGCAGCGTGGCGTAATT 1434 36 100.0 30 .................................... TTTCGTTGAGCGTATTCAGTATTATGCGAA 1368 36 100.0 30 .................................... CGTTACATAATCAGTCTCATCATTGTAATA 1302 36 100.0 29 .................................... TGTTGTCGTGATAATCCACCATCTGTTAT 1237 36 100.0 31 .................................... TATGGGGTGCTTGTGTGGTCTATAGGTCTAA 1170 36 100.0 30 .................................... AGTCTAAAGAAATAGATATTATAATGCTTC 1104 36 100.0 30 .................................... AGCTAACTCTTCTGACTCTACCACTGTTAT 1038 36 100.0 30 .................................... GATATGCTTCTGCCGTTCCTTTATTTACTA 972 36 100.0 29 .................................... AAAATGGAAGTGATTAAATGACAGAGACA 907 36 100.0 30 .................................... ATCGTGATAACAAGATGATGTTCGACTACT 841 36 97.2 30 ................T................... GTACGATGTGAAAGACCCGTCATTCAAGAA 775 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 52 36 99.9 30 GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Left flank : TTTTTAAAATAGATGTTCATAATGATTTTAGTCATTTAAGTGCAATACAGACGAGGAAAGCATGTATTGATTTGATGAAGGAGGAGAAAAAAGAAAATATTCTTTTTCTGTTGTTTCCTGAAGCAAATCTAGGTATAAGGGACGTTAAATCCTTTATGGATTTAATTAAGAATTATGGAATGACAACGATTATGGTTACAAATCATCCTTATTTTATGGTAGAAGCCGATTCTTTGGCTATGAGCAAGCATAATATGACTTTGTTTGATATTAATCAGGTTAGAGACGAATTTCGATTAATGTTCCCAAACGAAGAGATAGATGAGAGCATTGTGAGACAAATAGCTATAAATGAATTTTCTCGACAATACTTTATTAAAGATGAGCGCTATATCAGATTTATAAATGAGTACTAGTCGTGTATAATAAATAATAACTATAAAAAATGTTTCATTATCACCATAAAGAGTAGTTTATGCCGCATAACTTCGTGTTTTGAG # Right flank : ATGTGTTCTTCTATAATCTTTATAATTAGAATACACTCATATTCCTCACACCTATTATTAGGATAGTTGACAAATTCTTCGGTTTCATGATAGAAAAGGATAGCTAAGAGCATTTATTCTTTTATTAAATATTCTTGTTGCTTCCAGTATCGGGTTAGTGATATTTTTCGGTACATTAATATTTGGTCCATAGCAGAAAGGTGGAGCCCCATGAATTTACGTTCAGGTTTATTAATTTTCTTTTTTATGATGTTCGTTCTATTAACTATCTATAACATTTATACAGAGATAATGAGTGATAATATTGCTGATTCATTAGGTGGATTTTATAGCTTATCAGTGCCGATGCTGGCTTTAGCATTTTATCCTGATTCAATAGATAAATCTTCTCGAAGTGTCCGAGTGTTTGTATATAGATTATTGATATTTGTTTACGCTGTTGTATTATTTAGTTTTATGATTAAATACCATGCGTCGTGGTTCTTATTATTCTTTGAAGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //