Array 1 320883-320114 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTT01000010.1 Actinomyces glycerinitolerans isolate G10_assembly1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 320882 37 100.0 36 ..................................... CAGTGGGACCTCATGTGGACCCCTCCTTGATCAAGG 320809 37 97.3 37 ......................C.............. GTCAGCCCCCAGGTGGAGGCTAGTGTGACCGCCACGG 320735 37 100.0 35 ..................................... CCCCTCCAGGGCGGACGGTCATCCGCCACTGAGAC 320663 37 100.0 36 ..................................... ACTCGTCCAGCCGGTCAATGGCGGCTTTCAGCTCGG 320590 37 100.0 37 ..................................... ATCGGTCATGCTGACCTCATCCAGGTGGAAGCTCTCT 320516 37 100.0 36 ..................................... ACTCGTCCAGCCGGTCAATGGCGGCTTTCAGCTCGG 320443 37 100.0 37 ..................................... TCGGACAGCCACTGGTGGGTTTCCTTGGACATTTGGG 320369 37 100.0 38 ..................................... GTGCAAGGATGAAATTGACGATCGCCTCCGCCTCTTGG 320294 37 100.0 35 ..................................... TACTGGCGGAGGGCGTCTGCAATGTATTCGTACAG 320222 37 100.0 35 ..................................... AGTGGCCGCGAGTGACGGCAAATACGAGCCGGCAT 320150 37 97.3 0 .....................C............... | ========== ====== ====== ====== ===================================== ====================================== ================== 11 37 99.5 36 GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Left flank : CGGTGCTAGGAACGAGAACGAAGGCTGTGGCGAGAGTAAGGACGACTTCGGCCCGCTGGACATCGGCGCGTCCTGGTTCTCCAAGTTCACGCGATTGGTGCAGGAAATTGAGGGATGATCGTAGGCGCGGAACGACCGTGCGGTGCTGGTGGTCGGTGCGCGAGACCGGCTGTCTTGACGGCGGAGGGGCCTGGAAGGAGGTGTGACGCGTGTGCAGCCTGGTTCTTATGTGACACATGTGGCTGGCGTGGCGCTCGCCGGATGGTCACGATTCGATCTACGGTACAAAGTTTGGTGCGTTTTGACCCTGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGGTTGGAGGGGTGTCGGTGGCGCTTGGCTTGTTTTCAACGAAAGGTGGTAGTTTTGGCCTGGTGCCAGTCGGTCTCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCGCCTCTGGAAGTGGCGGTATGACGCGGTTTCCAGGGGTAGGG # Right flank : GGCTTCGGCGGCATCATCTGCTGAGCATTTCCTGGCTCTTCGTGCGTGGGGCGTGGAGGGTTGCGTGTCGCAGGGTGAGGAACCCGGTGAGCCGTGGCGGTTCATTGCGCCGGAATTGACTGCCGCTATCCCCGGGACCGGAAGTGGGGCTGTCTACTACGCCACTTCGGGGTTAACAACGCCTGTTAACGTTCTGCTGAAGGGCTCCGAGGTATACAGCAGAACGTTAAGTAGCGTTGTTAACGTCCAACCGGCGTAGCAGACTGTCTCGGCCTGGCGCGCCAGGAGACTGCGCCTAGAGGCTCGACCGGGTACGTCCACCCGCGTAACAGTCGCAGCCCGAACCGCCGCACCCACAAGCACTACGAGCCGCTCGGACGCTCCGTCCCTGCCGCATGCCGCTCAGTGCGCTACCAACTCGAGCAGAGCACAGGCCTCCCGATAGGCGGCGTCCTGCTTGGTAATCCGGGTCTGACCAGCAGGGTTCCACTGAACGCCGT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 344442-343899 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTT01000010.1 Actinomyces glycerinitolerans isolate G10_assembly1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ====================================== ================== 344441 38 100.0 35 ...................................... GGTTACCTCGTTCGTGAGGTAGTCCGTCCACACCG 344368 38 100.0 35 ...................................... GTCGGGAAGGTTGGCAACCCCCCCGAAAGTTTTCG 344295 38 100.0 33 ...................................... TGTGGTGGGTGAACACGCCACCCTCGTAGGTAC 344224 38 100.0 34 ...................................... TCATCGACCACCAGGTGGTGCCCGCACGACAGGG 344152 37 94.7 29 ........-............................C GATAGGCTTCCATCTTGACCTCGTCGAAA 344086 38 100.0 36 ...................................... CCGGCCAGCCCAGGACAACAGCGCTCCCGTCATCAA 344012 38 97.4 38 ...........T.......................... CAACCGGGATTGGGCCGGCGTAGTGGTTATCGTCGCCT 343936 38 86.8 0 .....................C..........C..GTC | ========== ====== ====== ====== ====================================== ====================================== ================== 8 38 97.4 34 GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGACG # Left flank : GCTGTGTGCTGCGGCGGTACGGCCAGGTGTTCCGCAACGGGAACATCTTGGCACCGATTGCGCCGGTGCGGGGCGGTGTTGGAAGGGGCGGTGTCTGAGTAGAAGGTGCAATTGCGTGGGGCGGATATTGGTTGGCGGCTGGTATTTGTCACCCGGAGTTTGAGGAAGTCTCGGGTGGGGCAGGTGCGCTGGGGTGGGTTCGGTGGCGGGTGTGGTGTGTGGGGTTGTTGGGGCGTGTGGGGGTGTTGTGACACCCGCCAGATGGTCACGATTCGGTCTACGGTACAAAGATTGGTGCGTTTTGACCCCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGTTTGGAGGGGTGTCGGTGGCGCTTGGCGTGTTTTCAACGAAAGGTGGTAGTTTTGGCCTGGTGCCAGTCGGTCTCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCGCCTCTGGAAGTGGCGGTATGGCGCGGTTTCCAGGGGTAGGG # Right flank : CTCGGGGAGGGTGACCTGTGCGACGGACGCCGTGGGGCATGGTGTCAAAATCGATGACAAACGCCTCCCACACGCGCCAACCCTGATCCCAAGACCGCATGATTCCAGCGATTTGTCCGCAGTTGACGACGTCGCCAGCCTCGTTTGTCATAGATCCGGACACCCTCGGCCGCTGCCCGGCGGAATCAATGGCAACGGCGAGCCGCCGTCGTACCGCCCGAACGCCCAACCAACTCGCGTTGGCGGCGCTACCACCAGTGTGGGTTGGGCCACCGCTCAACGAAGAGACAAAGGCAATGGACTCAGACTCGGATACACCGCCATCTTCGTCTCACGGTGACGCGCGCTCGTCGGAGGAATCAGCACGCACCGCCGGCGGCAGGCTCCCAGACAGCACCATCGCCTACGTGTGTAGCCTTTATCCCGAATCCGGACACTTTTCAGTCCTCTGCCCACCGGGATGTGCGGTTGCGATTGCCTCTGCCGGTAGAAGTACCCGC # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 126501-126025 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTT01000015.1 Actinomyces glycerinitolerans isolate G10_assembly1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 126500 37 100.0 37 ..................................... CTAGTATCCGTTGCTGGTAGGGGTATGGGTGCATACC 126426 37 100.0 37 ..................................... AGAATCTGCAACGATGCCTCGAGGTCAGTCCATTCGG 126352 37 100.0 35 ..................................... CAGGTTGTGGTTTTCGTCGAAGTGGACGTAGCCGC 126280 37 100.0 36 ..................................... GACCTGCACGGTTGGGTCAGGGGTAATGGTGACGGC 126207 37 94.6 36 .....................TC.............. CGGGGCAGCGGACCCCACGGGTTCGTGGGGTCGGGG 126134 37 94.6 36 .....................TC.............. CCCCAGTCGGGGCCTTCAAACTCGCCCAGCTCGCGC 126061 37 94.6 0 ....................CA............... | ========== ====== ====== ====== ===================================== ===================================== ================== 7 37 97.7 36 GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Left flank : GTGCATTTTGTTACGCCGGTTTGCGGTCTGCTGCGCCGCTCAGTCGTCTGCTGTATGCCTCGGAGGCCTTCAGCGGCGCGTTAACTGGCGTTGTTAACGGCGAAGTGGCGTGGTAGACGCCCGGCGGGGTGATGGGTGCTCGCGGTCGCCTGCTGCGGTAGCGTCGGTGCTGCGGGGACGCCTGGAGGTGGCGAGAGCGGCGGTGGCGGGTGTGGTGTGTGGAGTTGTTGAGGTGTGTGGGGCTGGTGTGGCGCTCGCCGGATGGTCACAATTCGGTCTACGGTACAAAGATTGGTGCGTTTTGACCCCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGCTTGGAGGGGTGTCGGTGGCGCTTGGCGTGTTTTCAACGAAAGGTGGTAGTTTTGGCCTGGTGCCAGTCGGTCCCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCACCTCTGGAAGTGGCGGTATGACGCGGTTTCCAGGGGTAGGG # Right flank : TTTGTCAGGCATGGTCTCGGCATCGAGGTTGTAGGGCGCTTCGCGTTTGAGGGTGTGGATGAAGCCGGGAGTCGGCTCGCCCGCGTGCTTAGCGCTGACGTCGTCTACTACGCCGGTTAGGTGTTTGCTGAAGGGTTCTGGGCTCTTCAGCGGAGGTCAAACTGGCGTAGTAGAGGCCTAAGGGGCGTACCCAATGATCGGACTCTGGCCTCAATCCCACTCGCTCTACGTCCGCGACGCCGCCCCACCTCAGATGCTCGCACCGCCAACCTCCATGCCCCCACAAAGAGGCGGTTCATCGTCGGGCATACGGGCTCTTCGTGTTCGGGGGTGTGGTGGGCTGGGGCTGGTGGTTCGCCGGGTGGTGGTGAGCACGCGTACCCCGGCTGCGCGGTACGCGGTGCGATTGACGGGAGTTGGGCCGGGGTGTCCGCTGAACCACGGCGGGCCAGGCACGATAGCTCCTGCGTTCGGGTCAACGTTCGCGTGTCCAGCCTGAC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Alternate repeat : GTCAGGAAGCACCTCGCACCTTCAGGTGCATTAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 874-2130 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTT01000016.1 Actinomyces glycerinitolerans isolate G10_assembly1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 874 36 100.0 37 .................................... GAGACGGACTATCAGGCTGCTGTCACTGCCGCCGAGT 947 36 100.0 35 .................................... GAGGAGACCGCCGGCACCGAGGGGGAAGACGACTC 1018 36 100.0 36 .................................... CTCATACACCGCGCACGCCGTATCGCTACCCCACCG 1090 36 100.0 37 .................................... TCGCGGCCGGCGCTGGTGTCGGCCTCACGGGCGGCCA 1163 36 100.0 35 .................................... AGGTAGGTATCGGGGTGGGCGCGTAAAGCTGCCCG 1234 36 100.0 34 .................................... GGTGACGGCATGATGGTCTCGGCCGACGACCCCG 1304 36 100.0 38 .................................... GTGGCGGACCCGCCGCCGGGGGCAGCCCACCCGTTAAG 1378 36 100.0 35 .................................... ACGACCCGGGTCGACGTGTCTGCGATCAGGCCCTC 1449 36 100.0 34 .................................... CTCATAGCCGGGATCACACCGGCCGCCCCCTCGA 1519 36 100.0 34 .................................... GCGATTGGGTGCGCTCACCCCGTCACGTTCACGG 1589 36 100.0 38 .................................... CTGCACGGGCGCACCCGCCGCCGCGTCGACCCGGCCAA 1663 36 100.0 35 .................................... GGCAGCCAGATCATCGATCACCCGCTCCCCGAGCG 1734 36 100.0 37 .................................... GAGAGCGGGGCCTCCTCCTGGGCGATCAGGAACCCCG 1807 36 100.0 36 .................................... AGCGCGCGTGCGACATGGCAGGCGAGCGTGAGTGCG 1879 36 100.0 38 .................................... TTGCCGCGGGTCTTCCCGCCGCCCAGTGCACGAGCCAG 1953 36 100.0 36 .................................... CCGGATATCAGCGAGCGGGCCGCCGACGACCTCGTC 2025 36 100.0 34 .................................... GCGTCCACCGTGCACCGCAGCCAGGGCGTCACCG 2095 36 94.4 0 ..................................CT | ========== ====== ====== ====== ==================================== ====================================== ================== 18 36 99.7 36 GTTGCAGTCCCTCCGGGGACTGCACTTCATTGAGGC # Left flank : CGATTCGCTGATGCGGGACGATGTTAGGCGGGTCCCGGTAGCTTATGATGTGCCGTCGGATAGACGCCGAAGCCGGGTTGCCAAGAAACTGCTCAAGTATGGCGATCGTATCCAGTACTCGGTCTTTGTTGTTGATGCTACTCCGGCGAAGCTTTTGCGGATGCGTGCCGAGCTCGACGAGGTCATCGATCCCGATGAGGATTCTGTGTTGCTGTGCGATGTAGGCCTGTTGGCCAGCGTTGACGCCGAGCGCTTTTCCTACATCGGTTTGACCCGGACGATCACGCCTGAGGGGCCGCTTGTCGCGTAGCCTGTGACTGGCGGCGAGCGCTCCGGTGGTCCGGATGAGCCCGGTAGCGCTCGCCGCCCTCAACGCCGCGTTTTGTGGCATTTCGGAGGACACACGGCTCGGTGTGGAGTGCGTCAAGGTGGTGCGTCCGGGACGAGCGCTCGCGATGTGGCTCCATAGTCGCGACGTGGTGGGCTAATCTATTGGTGCT # Right flank : TGGGCGCCGACATCATGTCTGTGAGACATGCATGTCGGCGCCCAGACTGACGCTTAGGAACTCCGTCTACCCGCCTCGGCGTTTACGCCCGCCGCCGTCTACTACTCCGTGGGCGGCGGCGGGGCGGAGACGGGGCGGCCGTCGTTGGTCAGTTCGAGGACGCGCGCGTGGATGGAGGTGCGCCCCTGGAGCGCGGCGCGCAGGGCCCGGTGCAGACCGGTCTCCAGATACAACTCCCCGTTCCAGGCGACGACGTGGGCGAACAAATCACCGTAGAAGGTGGAGTCGTCGTCGAGCAGGCCGCGCAGGTCCAGCTGCGCCCGCGTGGTCACCAACTGGTCGAGCCGGATCTGACGAGGAGGGATGGCCGCCCAGTCGCGCTGCGCAGTGACCCCGTGAGCGGGGTAGGGCGCACTGTCGCCGACGGCCTTGAAAATCACGAACCCATGCTAACGGGAACGTGTGACACACCGGGACACGGAACGGCATTCGGACAATCC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGTCCCTCCGGGGACTGCACTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 136467-134061 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTT01000011.1 Actinomyces glycerinitolerans isolate G10_assembly1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 136466 36 100.0 36 .................................... GCGGCCCTAGCTACACGCTTTTGTGCCCTGGCGTGC 136394 36 100.0 37 .................................... CCGGACGGTGATGTTCAGGCGTTCCTCGCAAGAGCGG 136321 36 100.0 35 .................................... GAAGGCATCCCCTGTAATCAGGCCGCTTTCGAAGA 136250 36 100.0 36 .................................... CACGAAGGTGGGTTGGACCGTGAAGGACACCGGCGT 136178 36 100.0 35 .................................... TCCCACACGACTAACGGCGGCTCGAGCGCCTTGAT 136107 36 100.0 35 .................................... GTGCGGCCCGGATGGCGGCGAGGAGTGCCTGCCGG 136036 36 100.0 35 .................................... TTCGACGGGTAGGGTCTTGGCGTGCTGGACGCTGG 135965 36 100.0 35 .................................... GTCGTAGTGGACGGTGACCTGTGCCTTCGCGTCCG 135894 36 100.0 36 .................................... CCGCATGAGGATGGCCAGTAAGTTGAGCACGGACAA 135822 36 100.0 37 .................................... GTGCCCAAGCGCACGACGCAGGAGTACTGCACGGCCA 135749 36 100.0 37 .................................... GCCAAGACCAACCCGGGCCAGGCGGAGGCGAAGCCGC 135676 36 100.0 37 .................................... GCCAAGACCAACCCGGGCCAGGCGGAGGCGAAGCCGC 135603 36 100.0 33 .................................... ACGGCGAGTGTCAGCCCCTCGGGGAGGACGCCG 135534 36 100.0 39 .................................... TTGACACTCCCCGCGTAGTCACGCTCCGAGCGCTGCCCA 135459 36 100.0 36 .................................... GCGTCGGGGTCGAAGGTCAGGCTGAACACTTTGGCA 135387 36 100.0 36 .................................... CCCCAACGATGGTGATCATGCGAACACCATCTCCCG 135315 36 100.0 38 .................................... CGTCGGGTACCGTGTCCCCGCTGTTGATGATTCCCTCG 135241 36 100.0 36 .................................... GACGGTCAGGCGCGGACGGCTGCGAACGCCTCCGGG 135169 36 97.2 36 ................A................... CTCACAAGAAACGGCCTATACGGCATCACAGTAATT 135097 36 94.4 33 ..........T.....A................... TGTAGACTTCGTTACGAGGGCAGTCACCCCCTC 135028 36 94.4 36 ..........T.....A................... TTGATTCCGTCACGGTAGACGGTGTTGATGACGAAG 134956 36 94.4 35 ..........T.....A................... CGGAGGTGGCGTCTGCCATGGGCAGTCACCCCCTC 134885 36 94.4 36 ..........T.....A................... ACGGCTCAGTAACCGCAATCACAGCCCCACCGACCG 134813 36 94.4 36 ..........T.....A................... GCCATGCTGGTGCGAACTGTGTAATTCCCCCCGGAC 134741 36 94.4 36 ..........T.....A................... AGCACCGTCATGGTTATCGGCATCTCCGGCCAGACC 134669 36 94.4 35 ..........T.....A................... TAGTACTGCCGCACAGTCTGGATCGTGTGCATGAG 134598 36 94.4 36 ..........T.....A................... TTGGCGTCAGCTAGCGGTAGAAGCTCAACGCTGGTG 134526 36 94.4 36 ..........T.....A................... CGCTACCGGGGGGCGCGCCGGCGCACCTGCCCCCAC 134454 36 91.7 36 ..........T.....A..................T GCCTGTAGCGAGTTGACATCCACCTTGTCGGCAGTA 134382 36 91.7 35 ..........T....GA................... AACTCCTGGAAGGTGCGGTACGCGACGGGCTTGCC 134311 36 94.4 36 ..........T.....A................... GCCTGGCCCATGATTGCGTCCTGCGGGTTGTTGACG 134239 36 94.4 34 ..........T.....A................... AGTACCACGACGTCGACCAAGATCAGTGCCGTGG 134169 36 94.4 37 ..........T.....A................... GGCACTGCCTGGAAGCAGATCCTCTTTGATGCCGTCG 134096 36 83.3 0 ...............C...T.......GG.C....G | ========== ====== ====== ====== ==================================== ======================================= ================== 34 36 97.0 36 GTCTTCCCGGCCTTCAGGGCCGGGCTCCATTGAGGC # Left flank : TGCTGGGGGAGTTGGACGAGTACACGGCGATGGTGACCCGATGAAGACGAACCGACGCAGGTACCTCATTGCTTACGACATCCGCAAGCCGGGGCGGCTGCGTCGCATCTGCAAACTGATGGAGGCTAACGGTGAGCGGCTGCAGTACTCTGTATTCATCTGCGACCTGACCCGCAGCGAGCTTGTCCACTTGCGTGCCGACGGTGAGAGGATCATGAACCTTGATGAGGATTCGGTGGTGATTGTGGATCTGGGTGAGATCGGCGAGGATCGCTTCACGTTCGTTGGGCGTCGCCGGGGGTTGCCTACGCGGGAGGCGCAGGTTGTCTAGCGAGCGCTCGGGTGCCGGTCGGATTCCTGGGGAGCGCTCGAATTCGCGGTATGGCGGGGTTTTCTGGTGGTTGACGCTCGATGCGGCGCGATCGGATCTGGCGTTTCTGAGCCAGCGCTCGCGAGACCGCGTTGAATCGTTGACGTGCCGCGGCGTATTCTGCGAGCTG # Right flank : TAACACGCCGTCTCCACCGACTACCGGGGCCGGCACTCGCGCTGCGCCCGGGTCCTGTCTTCTTCAGGGCTGGATCGCCGGAACGAATGTCCAAATCCGGCATAAACGATGGCGAGACATCGACTGCCGAGCAACCAAACCGCATGATTCCAACGGTCGGGAGAACGCCGATCGCCATTACAGGCTTGTTTATGCCGGATTTGGACAGCCCGATGCCGTGAGCGGGCAGTGGGGGTGAGCGACGGCCCGGTAGTGCGGCTGCGGGAAACGGCGGCTCGGAATGCGGCGCCAGGGTCAGGGCTTTGCAACAGCACTGCGGCTGCAAGAAGTGGGGTGGCTGACGAGGCTTGAACTCGCGACCTCCTGGACCACAACCAGGCGCTCTACCGACTGAGCTACAGCCACCATGGGGCGACGTCGTCGCACCGAGTCGGTACTTTATCGGCTAGCCCGTGCTGGCACCAATCCGAGCCCCGTGTACTACGTCACCTTCGCTGCAG # Questionable array : NO Score: 2.93 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCGGCCTTCAGGGCCGGGCTCCATTGAGGC # Alternate repeat : GTCTTCCCGGTCTTCAAGGCCGGGCTCCATTGAGGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-15.40,-15.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 266123-263058 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTT01000011.1 Actinomyces glycerinitolerans isolate G10_assembly1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 266122 36 91.7 37 ..T...G................G............ GCAGCGGTGCGATCACCATGCGCGCGTTGCTGGTCCA 266049 36 91.7 35 ......G..........C.T................ CCAGCGCGGTCGACACCTACAGGGAGGCCCAATGA 265978 36 91.7 35 ..............T..C.T................ GTCGACGAGCCGGGCATCGCAGCAGCTGCCGATCG 265907 36 91.7 38 .................C.T..A............. CTGCGCACTGCACCAATCGACCTCAACCAGCCGGCGCC 265833 36 91.7 37 .................C.T..A............. ACGGTATCGCCGGCGTGGTCAATGCGACTCTCATGAT 265760 36 100.0 37 .................................... CGAGTGCCCATAGGACGGATACGCTTTTCGGTGGAGC 265687 36 100.0 37 .................................... ATGCGGATGATTGGTGCCGTAGGCCAGCGGTCGGACC 265614 36 97.2 35 ..........................T......... CCGTCCATCCCGTACTGCGCCCAGGTTGACGGAAT 265543 36 97.2 35 ..............T..................... ACCCGGGGAGTACGTACTCCGGAGGCTGGGAGTTC 265472 36 94.4 37 .................C.T................ TCGACCCCTTCGCCCAGGTCACCCCCACCGACCTCAG 265399 36 94.4 36 .................C.T................ GGGCGTGGTCAGGATTCACTGTGGACACTGGGCAGA 265327 36 94.4 36 .................C.T................ GGGATCGCGTGGCGAGCCCGCGCCTGCCGAGCTCGT 265255 36 100.0 36 .................................... GCCCGCGCCGCTGAGCTACCCGGCTCAGGTCAACAC 265183 36 97.2 36 ..................T................. GCCTTGGAGCACAACAATGACTGACCCAATCCTCCA 265111 36 94.4 36 .................C.T................ GAAAACCCCAACACCCTCGGATTCATCACCTACCCC 265039 36 94.4 35 .................C.T................ GTGTCGCTGCGCCCGGACTTGCAGGAGGACCCGTC 264968 36 94.4 37 .................C.T................ TCGTTGAGGCTATGAGCCGAGCCAACTCCGGCGACGT 264895 36 100.0 36 .................................... GTAGCTGACCGGAGAGATGTAGCGGCGACCAGCCTC 264823 36 100.0 36 .................................... CGGCAGGCACCCATACGTGAGCACCTGAGATGAATC 264751 36 100.0 36 .................................... CGCTTAGGGCCCTCGTCGACAAGGAGGCTGACGATG 264679 36 100.0 36 .................................... CCGATGCGGACGCGACCTGTCCACCCTCACCTACGG 264607 36 100.0 35 .................................... CAGTTCATTCCCAGCACGTGGGCGACCGCCGGCAA 264536 36 94.4 36 .................C.T................ CAGATGATGGAGTGGCAGCAGAACGACTACAAGATC 264464 36 94.4 36 .................C.T................ CTCCCCGGCCACTGTCGTGTTTGCGGGGCTGGTTCA 264392 36 94.4 36 .................C.T................ GCATGCGCGATCAGTTCAAGCTCACCCGTGCGTGGG 264320 36 94.4 37 .................C.T................ GGGCGCAGGGTCGTAGCGCCCAGTCCCCTGTCGAGTT 264247 36 100.0 35 .................................... GATCTGGCCGAGTACGTGGCCCTGATGAGTAGCGA 264176 36 100.0 35 .................................... CTAGGAGAAGCAATGAGCACCAACCCAACCCCGAC 264105 36 100.0 36 .................................... CAGTGGGCAGGCGTTCGACACCGTGTCTCTCGCGGA 264033 36 100.0 35 .................................... CCGGATTCCCGCCTGCCACACGGCAGGCCATCATG 263962 36 100.0 36 .................................... AATCGACGCCGTAAACACGACCGAGAAGGAGACAAG 263890 36 100.0 38 .................................... ATGACGGCCCTGACCGAGTCGCATCTGCAGATGTACGC 263816 36 100.0 36 .................................... CACGCAGGCTCTCGTCGAGTACCTCGGGCAGGCAGA 263744 36 100.0 41 .................................... CCGCACATACGACGCGGAGGAATTCGGCCAGCTGTTCGAAG 263667 36 100.0 36 .................................... TTATGTTCCGCCGGAGCTCAGTACCGGCTCCATCTA 263595 36 100.0 37 .................................... GCGCCGTCACGCTCACCGAGCTGGTCCTGATCCATCA 263522 36 100.0 36 .................................... TCAGCATCGTCAGGATCGGACCCTGAGACTAGGAAG 263450 36 100.0 35 .................................... CGGCGATGGGTTACGACTACACCGAGTATCAGCCT 263379 36 100.0 35 .................................... GCCCTGAACGATCTTCGTGACCGCGTTGCCGTTCA 263308 36 100.0 36 .................................... CTCCCTGCTAGCCACGCGGCCGCCAATCTCGACAAT 263236 36 100.0 35 .................................... GCCAAGCAAGGGACGTGTACGTTACCGGAGACTAG 263165 36 100.0 36 .................................... GACTGGCTACTTCGCGCAGCAAGCCGCCGACGGCCT 263093 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 43 36 97.5 36 GCCTCAATGGAGCCCGGTCGTGGAGACCGGGAAGAC # Left flank : GCGTGTCCGGAGACGGCCCAGACTGGAAACCGCCGGGTGGAGTGGCATGCTGCCGCGCGTGTCCGGAGACGGCCTGCTGGCCCGGTTGCGTGAGCGCGCCGAGACCCACAACCTGCCGGTCGTTGTGGTATCCGTGAAGAGGCTCTTCTGGTTAGTGGGTGTGGGTGGTGTGGGGTGTGTACCCCGGGGGCCCCGCCGTGGGACGGAATGATGCTCCTATGGTTGTCAAAATCGATGACAAACGCCGCCTACGACCGCGAGAGCCGATCTGACACCCGCATGATTCCAACGTTCTGCCCGCGGCTGCTGCCGCCTCCTACCTCGTTTGTCATAGATCTGGACACTCCCTGCCTTCGCCCGCCGGAATATGCGCTAGCGGCAAGCTGCCCGGCGTCGACGGTGACCGGCGAGCAGGCCAGCATCCGACATCGCAGGTGCCAAACACCACGTCACGTCCCCCACTCCACTCCCCGAGTCGAACAAGCCCGTTTTGTCGCCGC # Right flank : AGCTCGCTAATTTTGCCGCAGCATGCCAAGGATTGTACCTGATCTCGCGAGCGCTGCCGTTGAAACGCATGACTCAGCCACGGTGCCCTGCTCGGCGAATGGTAAGAAAACCGCGTCATGCCGCGAACTCGAGCGCTTCCCAGGGAATCGGTCGGCACCGGAGCGCTCGCACGCAGTCGGCGTCCTTCGGTTCGGTGAGCCTGCGTGTTGGTTGACGAGCATGAGATGTTCCTCCTCGAACTCGCAGTGCCTACACGCGCCAGGTTACCCTCATCGAAACAGGTTCAACCGATCTCAGTGATGCGGGGACGCTGCGGCACGGCGGTTTGTCAGCGGGAGCGCCAGGAGCGCAGGCCGGCCTCGCCTGCGGCGATCGCGCCGAACAGGGCGCCCGCAATCGGCCAGATCATCCAGGTGATGCCCCAGTCGGAGGAGATGAAGGACCAGGCGAGGTAGATGACTACACAGCCGATCCAGTATGGCCCGGCGATCGCCTCAAT # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.93, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGAGCCCGGTCGTGGAGACCGGGAAGAC # Alternate repeat : GCCTCAATGGAGCCCGGCCTTGGAGACCGGGAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.10,-14.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 3 301582-300444 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTT01000011.1 Actinomyces glycerinitolerans isolate G10_assembly1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 301581 37 100.0 37 ..................................... TTAATGAGTCGGGGTTAGTTGATGTCCGCGTCGAACG 301507 37 100.0 38 ..................................... GTAGCGTCGCCGCTCCGCATCGCCACGTTCGACACATG 301432 37 100.0 37 ..................................... GTTAGGGCGTTCCCCGTTGCCTCGAGAACAGTGACGC 301358 37 100.0 34 ..................................... GACCTCGCCAAACGTGCTACGCATACTATTTCCT 301287 37 100.0 35 ..................................... CCCCCTGTAGGGGGAGGTTTGGAGGGCTGCGGCAA 301215 37 100.0 35 ..................................... CGAGTCATCTTGCAGGGCACGCGCACCACATTCAC 301143 37 100.0 39 ..................................... GGATCGGGTCGGACTGTTTCCAGTCATACACGAACCAGG 301067 37 100.0 36 ..................................... GCCCGGGTGGTGCAGGTTCGCCGCATCTCCTCGCGT 300994 37 97.3 36 .....................C............... GTGCCGTCATGTACGGGTGGTCGTAGGACAGGAAGT 300921 37 100.0 36 ..................................... ATCAGCAGGACGATCAGTACGCCCTGACCGGGTTGA 300848 37 97.3 36 ............................A........ GCCGGTCCTCCCTGATGCTCACGACTCCTCCTTGAG 300775 37 100.0 36 ..................................... TGATTGCCCTGCTTGACCGCCTCAGGCTCATTGCGC 300702 37 100.0 36 ..................................... GTCAACTCATGGAGCAGGTCGGCCCACTCTTGGCCG 300629 37 100.0 36 ..................................... TGATTGCCCTGCTTGACCGTCTCAGGCTCATTGCGC 300556 37 100.0 39 ..................................... GTCATAGGGGACTCCCTTCCGGGGTGGAGTGAGCGAACC 300480 37 89.2 0 .....................C...........G.CG | ========== ====== ====== ====== ===================================== ======================================= ================== 16 37 99.0 36 GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Left flank : GGCGTTCTAGGGAGGGCATTTAGAACGTCGGTTCGCGGTCTGTTACGCCTGTTCGGGGTTTTTAGGGGTCTGCTGAATGGCTCGGAGGCCTTCAGCAGACCGTTAACTGGCGTTGTTAACGGTGAAGCGGCGTAGTAGACGCGCGGCGTGGTGTGGGTGCTCGAGGTGGTGCATGGCGGGGTGTTCGCGGTGTCGGGCAACGGTGGCGGGTGTGGTGTGTGGGGTTGTTGGGACGTGTGGGGTTGGTGTGGTACTCGCCAGATGGTCACGATTCGGTCTACGGTACAAAGATTGGTGCGTTTTGACCCTGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGTTTGGAGGGGTGTCGGTGGCGCTTGGCGTGTTTTCAACGAAAGGTGGTAGTTTTGGCCTGGTGCCAGTCGGTCTCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCGCCTCTGGAAGTGGCGGTATGGCGCGGTTTCCAGGGGTAGGG # Right flank : CGGGCGGGGCGTGTGGGGACCGTCGGCCTCGGATCGGCACTATGGTTAGTGCCTGCTTAGTCAGGCGGTTCAGCGGACCCTGTTCACTCCACTGCTCGGTAGAGCGCGTGCGGCACGCCTGTGGCCGCACTGCTTTCAGGACGCCTGGGCCCAGGACCTCGCCCAAAGAATGACAGGGCGCATGCCCGAACTAGCGGCAGCGGACCTGGGTGACGTCCCCGCAGCCATCTACGCCCTGCGGCATCGGGCTGCGGTAAAAGAGGTGCGCAGGTACCTTCGGGACCACCCCGGCGCCGCCGTCGTCGACCTGGGCTGCGGAATGGACCGACTCGTAGACGATTTGGACGACCCCGCGGCGCGCGTCTACTGCCTGGACCTGCCGGAAGTCGTGAGCCTGCGGCGTGAGTGGCTACCACCTCACCCACGTGAGAGGGAACTGTCCGCCTCCCTGACGGACACCGACTGGATGGCAGACATCGACGCCGACGCCGGAATGGTCG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //