Array 1 82366-83774 **** Predicted by CRISPRDetect 2.4 *** >NZ_PXXU01000002.1 Nitrosomonas sp. APG5 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 82366 28 100.0 32 ............................ TTATTGAGTTACAACGATGCGCATCGATACGA 82426 28 100.0 32 ............................ TAGACCATCATTAGGTTTATTTCCACTTCCTG 82486 28 100.0 32 ............................ TTATTGTGTAACTACTATGCGCATCGATACGA 82546 28 100.0 32 ............................ ATTAGGGCCTTTTGCCCATCCTGCAAGATCCA 82606 28 100.0 32 ............................ GGGCGCGAATCCCCCCAGGTCGTTGCTGATAG 82666 28 100.0 32 ............................ TCAGATCTACGCGCTGCCATGATTAAATCCCT 82726 28 100.0 32 ............................ TGCCCATTGCTCAAGTTATCAGTAACTCGCAA 82786 28 100.0 32 ............................ GGATGTTGGCGCTGAAGTGCGATAAGCCCAAC 82846 28 100.0 32 ............................ GCAAATGAACAAAGAGAATCGAATTCGATAGA 82906 28 100.0 32 ............................ TACGGCACAACAAATAGCAATACTTTTTCTGC 82966 28 100.0 32 ............................ AGTCGGTCATATCGCTGCTCTCGTTGTTCGGC 83026 28 100.0 32 ............................ GCACGCTTCTTTACATTTTCGGTGAATTTTTT 83086 28 100.0 32 ............................ TTTAAATGGAACCAGGAATGCTTGACCTAAAG 83146 28 100.0 32 ............................ GCACAGCCAAAAGACCGCCATCACGTCGCGGC 83206 28 100.0 32 ............................ AAGGGATTATGTCTTATGATGAGACTGCCAAC 83266 28 100.0 32 ............................ TTTTATCCATCATTTTGAAGGGTGGGAAGTAT 83326 28 100.0 32 ............................ TTTAAGTTTTTTTATCTCTTCTCTCAATCTCT 83386 28 100.0 32 ............................ TTGGCTTTCGATTAGCCATAAAAAAAGCCGGA 83446 28 100.0 32 ............................ GGTAACACTCGCCAATCTCCGGAAAGTGACAC 83506 28 100.0 32 ............................ TTGATCAATTGCGGCCTTGATAACATGCCAGA 83566 28 96.4 32 ............A............... AGTCAAAGCGGCATTCAAAGTCAATTACAATA 83626 28 100.0 32 ............................ TACTGAGGGAGATAACGATGCTGATGCTGTAA 83686 28 100.0 32 ............................ TCTTAATTTTTGCAGGTTTTCAACCGTCATTT 83746 28 92.9 0 .........................C.C | A [83769] ========== ====== ====== ====== ============================ ================================ ================== 24 28 99.6 32 GTTCGCTGCCGCGCAGGCAGCTTAGAAA # Left flank : TACACTTGCCCGGTTTAATGCTTCAAGATGGTTAGCTCGTTTAAGTGATCATATACATCTCACCGGGATTCGCTCAGTACCCGATAAACTCAATGGTTACGCGATATATCAACGTGAACAACCTAAAACAAACAAAGAACGCTTAGCCAGACGCTATGCTATCCGAAACCATATTGACTATGACACAGCTATACAGCGCTATAGCGATATGGAGTATAAATTAATATCAACTCCATTTATTCGCCTGAAAAGCTTAAGCAGCAATAAAATATTTTGCTTGTGGATCAAGAAAAAAACAGCAATAGAATCTTCAAATAACACATTTAGCAGTTATGGACTAAGCACCTCTGCTACTGTTCCTGAGTTTTAACCCATTTTTTTAGTTCTTTAAAAATAAGCATATAAATTAGCCGGTTGAGTATATCAGTTTTGGGAATGGTTAAATTAAGTCAATCCCTGCAGACTGTTATACAGCTGGCTTTAAGTTCTTTTATGGTTTG # Right flank : CTGAATTGGCGGAAAGGTGTGTTGACTAAAAAAAGCAAGATTAATCTTTTCTTAAGAAGGATTGCACAAGATAAGTTCAAGAAGAAAAAGGGAAATAAAAACTTTATGTTTTTTACAGCTCCAGGTAATTTGATTGCTGCAAACTTTATCGAAAACCAAGATTAGTAATGTTCGGCTCAAAAAATAGCTCCTGGCATAAATTCTTGATCACTGTGCCTGAGCCGTTGATTAAAATTGCATTCCATTATGACGCAGCAGAAAAATAAAAATAAAATAACTAATAATGGTAGCGACAGCCGATAGGCCGAGACTAGGCCAGAACCCCATTCCCTGCTGAAGCAATACGGGAAACAGCAAAAACAATGTAAGTGAGGGCAAGACTAACCAGAAAATTTGCACTGAAAGGTCGGCGATCTCTGATAACGAAGAGCCATCCAGGTAGAGCCAAACAAAGGCCAACAATGATGTAAGAGGCAAAGCTGCAATCAGTGCTGCGAACC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //