Array 1 7425062-7421428 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058552.1 Paenibacillus sp. E222 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 7425061 33 100.0 35 ................................. CCCTTGTATGATGTGATGGCATCCGCGCGCGCTTG 7424993 33 100.0 36 ................................. ACCCTACAATGATTCCACCGATTAGGGTGCAGCCAA 7424924 33 100.0 35 ................................. CATCCAGCAAGAAGGAAGCCCTGGCTTGATCTTGA 7424856 33 100.0 35 ................................. TTTCAATTTGCTAAGAGTCTAGTACCACAAATTAA 7424788 33 100.0 34 ................................. TCCCTGCATTATAGCAGAATCTATAGAAAAACAT 7424721 33 100.0 34 ................................. CAGTAGTTAACTTGAACTACGATCTGGCAGACGT 7424654 33 100.0 33 ................................. AGAAAAGTCCATTGAGTTAATCGTGCTACCAAC 7424588 33 100.0 33 ................................. TGAGCTGAAGAAGCTGACTCAAGAAAAGATTCG 7424522 33 100.0 36 ................................. CCAGATGTGGGTCGGAAGTCTATTGTTCCTGACGGT 7424453 33 100.0 35 ................................. ATCCATACTGCTCATGAGCTAGGTTCGAACATTTT 7424385 33 100.0 35 ................................. GATGAAGAATACAGCGAATTTGAAGCATTCATGGC 7424317 33 100.0 35 ................................. GTATTTCTGGGTAAAAAAATTTAATAAGGTGGCAG 7424249 33 100.0 35 ................................. CCTGAGTTTAAACAGATCGCTGATGAACTGTATGA 7424181 33 100.0 36 ................................. TTAATGCTCGCTTGGTTGGATGTGATCCCTTGGCGA 7424112 33 100.0 35 ................................. ATAAGGAACTCGGTGATACGTGTAGGGTCATTACC 7424044 33 100.0 35 ................................. TTATTTGTGTTAATCGCCAGTACTGCCAATGAACC 7423976 33 100.0 35 ................................. CCCTTTGATTTAGGTTGCCTTAACGACCCGACCAA 7423908 33 100.0 35 ................................. AGGCGAGGCATTTAAGCCCGTTTCAGGCGGCGGGA 7423840 33 100.0 37 ................................. GATGTACTCCTCGTCAATGCCCGTCAGGACGGCCGTC 7423770 33 100.0 35 ................................. CGAAAGGTACCGCGTATAACAGGCGTCCCGGCTAC 7423702 33 100.0 36 ................................. ACCTTTTGGTGATTGCAAATAAGAGCGGATGTCCAG 7423633 33 100.0 36 ................................. GTAACCAGCAAATAGCCAGTACTGAAAATGTACTGA 7423564 33 100.0 33 ................................. ACACGCAATACCTACATAAGCTAACTCGCTTCC 7423498 33 100.0 37 ................................. ATGATAAATGTAGTCGTCATTTTCCGGAATATACAGC 7423428 33 100.0 35 ................................. CGGCAGCTGGCTTGGATGTGAAATTGCTGAGAAAA 7423360 33 100.0 35 ................................. CTAGGGAACATAAAGCAGCCTTGAAATCGGCACAA 7423292 33 100.0 34 ................................. CTATGTAAAATATTGCGAGGAACTGAAGAAACTC 7423225 33 100.0 34 ................................. CGTTTTCGTAAGGTGCTCCATCAACCGATCCTCA 7423158 33 100.0 35 ................................. GTTGTCGGCCGCAATCTGTTCAACAGTACGCGGAT 7423090 33 100.0 35 ................................. AATATGCGAAGAAAATTACACAAAAAATTGCGGCG 7423022 33 100.0 35 ................................. GAAACCGAACAACAGATTGAACAACGGAGTAGCAA 7422954 33 100.0 34 ................................. ATCAATATACTGCGTGCCATTACAGACACTACAG 7422887 33 100.0 35 ................................. CTTTAAACATCCGAGCCATCTTATAGATACTGTTC 7422819 33 100.0 35 ................................. TAATACTGTGAACGTATGGTATTATAAAGTCATAT 7422751 33 100.0 34 ................................. ATAGGCTTACCGTCTGCCCGGGTGTAGGTTTCAT 7422684 33 100.0 36 ................................. CCTTAAGAACAAACTTAACCCAGCCTTTGCAATCAC 7422615 33 100.0 36 ................................. CGGCTAATGCAGCTACATCAACATTTGGTGATCGTG 7422546 33 100.0 35 ................................. TATCTCCGGTGCGAGACAGTCGGCAGAGTCATGGG 7422478 33 100.0 34 ................................. TGGGGAGTCCATCCATGGCGCCAGGTTCAACAGG 7422411 33 100.0 34 ................................. TGGTGGGTGTTCAACAAGGTCGCAGCGGTCGGTG 7422344 33 100.0 35 ................................. ATTCATAGCCTTAAAGTCTATTGCCCGGGCCGCAT 7422276 33 100.0 35 ................................. GGTTGGAAGATCGATGACAACGGTATGTTGGTCGA 7422208 33 100.0 35 ................................. CCTCAAGGATATGTCCGAAATTGCTGGACTCCTGA 7422140 33 100.0 32 ................................. ACGCCACACCGACGCTCTAATGATTGTGTCTG 7422075 33 100.0 35 ................................. CTCGATGTTATAACCACTGTATATAACTTCTTCGC 7422007 33 100.0 35 ................................. CGATCGACCATGCGGAAACGGGAGCCATTGATGCG 7421939 33 100.0 33 ................................. TTCCGTAAACGATTCGAGATCAGACTGCCCCGC 7421873 33 100.0 35 ................................. TCCTCTTGCTGATACATTAAGTTGTTTGGTCGCTA 7421805 33 100.0 34 ................................. CGGGCTGTTGGTGTAAAGGTGAATCCGGCCAGGG 7421738 33 100.0 36 ................................. ACATCAATATTGTCATTGAATATTTCACTGAGTTTA 7421669 33 93.9 37 ......T.........................C ACCAAATAGAACAGGGGATGTACCTGATGTTTCCCAG 7421599 33 100.0 36 ................................. ACATCAATATTGTCATTGAATATTTCACTGAGTTTA 7421530 33 93.9 37 ......T.........................C ACCAAATAGAACAGGGGATGTACCTGATGTTTCCCAG 7421460 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 54 33 99.8 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : AAGTAGGTGTGATGATTGCTTATTTTAATTACGTATGATGTGAGCACAATAGATAGTGAAGGTCGAAGAAGGCTATCTAAAGTGGCTAAAAAGTGTGTGGATCACGGTCAGCGAGTGCAGAACTCAGTATTTGAATGTATACTGGACGCTGCCCAGTTTAGACGATTAAGATTCGAACTGGAAGAATTGATTGATAAGGATACAGATAGTCTTCGATTCTACAACTTAGGCGATAATTACAAAAGTAAAGTCCAACATGTGGGAGCCAAAGATTCCTATGATATGGGTGATCCGTTAATACTTTAGCAGGTGCGAATGCCAAGCTCACATGATTTTCCTGGGGGATTCGCACCTCGGAATTTGTCGAAAATGTCCTTTTTGTGACCTTTTGGCAATGAATTTTAAGCAAATTCGATTGAGTAAAGGTTCTAACTAAGTTGAAATAACGAAAAGACGTTAATATCTATTCGAGAAATATTGCTATTACGTACTTTTTCGCT # Right flank : TGGTTTACGTTTATGAACCGATCAGCAAAATACATATGGAAAGCGAAACGTGTTCTTTCAAAGTAACCTGATACAAATAAGCCGGAGGCGCATGTTGGGCCGCACTCCGGCTTGTTTGTATTTGTAGAGATTCATCCTGCTTGGAAGTAAGCAAGCTAAATTAGCTCTTGCAATCATCCATAATTAAAGATATATTATTAATTAATTAATTAACTGATCATTTAATTAATTAAAGTTTATTAGAGAGGGGGATACATTTGGCAAGACCCATCAATGAAGAAAAAAGGTTGGAGCGTCGTAAACGGATCCTAAAAGAAGCAGTTGTTCTGTTCGCAGAAAGCGGATATTCAAATACTACAACGGCTATCATTGCGAAGAATGTGGGAGTGACTCCTGGAACCATTTTTCAATATTTCTCTAGCAAAGAAGCTTTATTCTATGCCGCTGTTCTTGAGCCGCTTGCTGATATACAGATGAGATCACTTGCTTGTCTACAACAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 7435217-7434189 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058552.1 Paenibacillus sp. E222 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 7435216 32 100.0 33 ................................ AAGGTGATTGCCGATGGTATTCAGACGCTGCTT 7435151 32 100.0 35 ................................ AAATTAAAAATGCAGGCAAAAGCACAATTTGCCCA 7435084 32 100.0 35 ................................ AACCGGATCAACCATGCAGTACCTAACCGTTCAGA 7435017 32 100.0 35 ................................ CACTTTTGGAGCCCTCCATGCTGTCATAGCGTACG 7434950 32 100.0 34 ................................ TCACTGGTATAGGCAAACGCGCGATCAAATTTAT 7434884 32 100.0 35 ................................ CTCGATACGGCGCTTGATGACGTCCATCGGCTCCA 7434817 32 100.0 35 ................................ TGTGTAGTTGTCGGACTCGCCTGCACGTTAGCTGC 7434750 32 100.0 34 ................................ TCTTTGGACAGTTCGTCCTTACGTGTATACAGCT 7434684 32 100.0 34 ................................ ATCACAGAGTTGGCCGATGTTTTCGGCAACAAGG 7434618 32 100.0 35 ................................ AGGTACTCTTCGCCCGCAACAGCAACCGCATTAAC 7434551 32 100.0 35 ................................ CTTTAGGTGCGGCTGACAATGTGCTGAGTGTTGAA 7434484 32 100.0 35 ................................ TTTCCTGAGAGGCGAGTTACATCCCCGTATTCCAC 7434417 32 100.0 34 ................................ TGACACGCTCATAATAACGCTGCAGCAATGCCTC 7434351 32 100.0 34 ................................ CATCGTGTAATGCTTGTGCATGGACGGTATGATA 7434285 32 100.0 33 ................................ TCTTTGAAGAAGGACCGGGTCGAAAAAACTTTT 7434220 32 93.8 0 .................A....A......... | ========== ====== ====== ====== ================================ =================================== ================== 16 32 99.6 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GAATAATTCTCGCTGAGCACCCCCAAGGAAATGTCAAAGAACTGATAGAGTCAATCGTGGATAGATTGTGCGGAATGGATGCTTTGACATTTCTCACGGATGTCTTATTGTGGACTCCAGAACGTGTGGATATGAACTTGAAGCTTGATCGATTTCAATAAAAATATGATGCGATGGTCATAGCAGCATATAGTATAAGATCGAATATAATGGGATTTTTTGGTTCTTTAGATGTTGATATTATCAAAATAATATTTTTAAGTAACAAAGATTAGACCGCTGAAAAGCGCTGCTTTACTGGTGCGAATGTTAAGCTCACATAAAATCTCTAGGAGATTCGCACCTCGAAAATTGTCGATTAAGCATTATTGTCCCCTTTTGGCAACATCATTCTTGAATTAAATGGATTATTTGTATTAAGATGAATTTATCATCTTTACTAAACGATAGAATAACGTAAAAAACATCTTTTTTTAAACGAATATACGTTATTTTCTGCT # Right flank : AAATCAAGGATCACACATAAAAGCTACGGCATGTTTGTTTAGCACTCTGTTTAAATTGAGAGATTTAAGCAAGGTATATAATCCGACACGGGAGGCTTTTTCTCGAAATTGTCCCTGGAATTGCGGAGTATATCCTTTTCCTACGGGTGTTCCTAACTGCCCGGTTATAGAATCTTAGATGCCTTCAATCATTTTGGAAACCAGTTTTTTTGTTTTCACCTAACCTGCTACAAAATTTTACAATTTCATGTAAAGGAAACCGAATCTTCTTGTCGAAATGTAAGATACAAGTCGAATCTCCTGAATACCGAAGTAAGATTGTGTTGTTTCAAATCAAATGAGGGGGACACTTGTGACCTACATTGCGCATATACGAGTCAAGGACTGGGCAATTCAGACGGTGATCGAGCATTTGCTGGAGGTAAGCAGAGGCAGTGGACGAGCGGGGGCCAAAATGGACGTGGAACATCTGGCAGCGTTGGCAGGATTACTACATGATA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 7438450-7436997 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058552.1 Paenibacillus sp. E222 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 7438449 33 100.0 33 ................................. TGAGTATGACGGAAATGAAAGATGAAATTGAGC 7438383 33 100.0 35 ................................. AGAAAGTCCAGCCAGAATTGAGAGATAGGCCAGCG 7438315 33 100.0 35 ................................. TTAATACTGAGTGTGGTGGTCAGTTTCGTAATGAG 7438247 33 100.0 35 ................................. TGTCTCGCGAAACAAAAGCAACGACTGTAATGGGC 7438179 33 100.0 35 ................................. AAAGCTCTTGGTGGTGGTACATTGGATGTGTCACA 7438111 33 100.0 33 ................................. CTTAAGGAGATCAAGTTGGTGTTTGCCGACGGC 7438045 33 100.0 35 ................................. CAATCTTGCTAGCAAGGTGTTTAATCTCCCTTTAA 7437977 33 100.0 36 ................................. CGGTTGTTGTTAATGACAAAAAAACAAGAAAACAAA 7437908 33 100.0 33 ................................. ATAGTGGAAGCGCACAACGAAAAAATAATTTTG 7437842 33 100.0 35 ................................. CTACAAGTCAAAGAGCTATGCGAACGTAGCGGAAT 7437774 33 100.0 35 ................................. CGAAAATGGTGCTGCATAATCGGACATGAATTCCA 7437706 33 100.0 34 ................................. CGATTACTCTTATCGCTGCCCACCCAAAACCGAA 7437639 33 97.0 34 ....................C............ TCCAGATCCATCGTGAAATAGTCAAATTGCTCAT 7437572 33 97.0 35 ....................C............ AAGTAAATATTCACGTTTAAGCTCCAACGTTTGTG 7437504 33 97.0 35 ....................C............ TCTAAACAGAAGCATCATAAACAAAAATGCCCCGA 7437436 33 97.0 35 ....................C............ CTTACGCATGGGTGGATCGACCATCATTCCGGAAT 7437368 33 93.9 35 ....................C........G... CCTCAACACATCCTAGAGCATATTTACCTATGTTG 7437300 33 97.0 35 .........T....................... AACTACGTCCTTGCCCCCGTCGATTGAATAATTAG 7437232 33 97.0 35 ....................C............ GATTATATTAAAAGACGCTTGAGAGGATAAATGTG 7437164 33 93.9 34 .................A..C............ GTTTATCACGCTGGACGTTATAGGTGACGATGCA 7437097 33 90.9 35 ....T..............AC............ CAAGCTACTGATACGAGTTCGAGTCTCGTATTCCG 7437029 33 72.7 0 ..........T.........C.AA...CAGG.G | ========== ====== ====== ====== ================================= ==================================== ================== 22 33 97.0 35 GTCGCACTCCGTATGGAGTGTGTGGATTGAAAT # Left flank : GTACCTTTCCCCACATTGGCCAGTCTCGCAACTTGCTCCATTGTGGTGGCTTTGTATCCAAACAGCGCGAACGATTTCTCAGCAGAGTCAATGACCTGCTGCCTTCGATCGATGGTTTTCATGGTATATCCACCTCCTTGTTTTCTGATTAAGTAAAAGGTGTGTCTATGTTTGACTAGATTACTAATATGGTCAACTGGTCGTTCGTAAATGTAGCACAGAAACAGGTAGAGTGGATGTGATCTTGGTCATAATGTACATGGGGGAGTGAGGAGGTTGTTCAGGGGAATCGGTATGTGACTTAGGCAGGTGCGAATGTGATGCTCACATAAAAACCCTGGGGGATTCGCACCTCAGATTTTGTCGAAAAGGGGGAATTTATTGCCTTTTGGCATAACGTAGACAGGAATAGATTGAATTATGATATGGAAAGTCATAGAATAATAGTGAAAAAACGCGTTTTTAATGGATCAGATCGTTGAGATATGTGTTTTTTCGCT # Right flank : GAAGATAAATAAAAAAAGGGAATTAAAATGCTGGAACGTGTTACCGTTCTTATATGCAGCGTTGTAGGTTTAGAATTCCAATAATATTCCTTAAAAAAAATTAGTGGGTTCAATAATTCTGGTATACAGTATAGATGGGCCATCTATACTGTGCGAAGTGAATAGATACGAGCTTGTCTTTTTCGATTACTGAACGTTCGATTGTGGGGATGATATTAGAGGAGATTGAACCTTAATAGAATTAAGATAGGCACTTTTATTCAAAAGTTGATGATATATGTGTTAAATCAGGATAATATGATTACCTATTTTATAAATAAAATTATCGGAACTCGTGTTGCATGAACATCAAATTTTCTTATTGGAAAGGAGTATCGGTTGTTAGTTGGAATATGGTAGATTAATGTGAAATGCAGACAAGTTTACCTATATAAAGTAAACCCGCTGTTTCAAATCCGCTAAAATGTATAGTCTCTTGCATCGCAATAAGTTTGAGATAT # Questionable array : NO Score: 9.00 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGTGTGGATTGAAAT # Alternate repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //