Array 1 5607-4486 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDSG01000151.1 Microcystis aeruginosa Sj, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 5606 35 100.0 38 ................................... AGCCAGTAACGCAGCGCGTATGGCAACGTGTCGATGCT 5533 35 100.0 35 ................................... CAAAGTTTTTCAGCATGAAAGTCTTGAAAAAGCAT 5463 35 100.0 40 ................................... ATTCTCTTTGCATGTCCTGAGAGCGATGTCCTCATAGAAT 5388 35 100.0 37 ................................... GGAGACTGCCCCCTCACCCAAAGGGCTATAAACCCAA 5316 35 100.0 38 ................................... CGTAGAATGTCCCTTTTGGGACCAGCAGCTCTTTACAC 5243 35 100.0 38 ................................... CATTAAAGTGGCTAGTACCACTAATATTAACACGAACT 5170 35 100.0 34 ................................... ACTTTGGCAGTTGCCAGATCTTCTTCAGCACCTT 5101 35 97.1 45 ...............C................... AGAAAAACAACAAAGCACTAATGAACTTCTTCATTGCATTAAACC 5021 35 100.0 37 ................................... ACCAACAGGGAGTCTGCTGGAAACGCCACCCCCAATA 4949 35 100.0 38 ................................... GAGTGGTGGGTGTGTTAGGGGCGATCCTTTCCCCCCTT 4876 35 100.0 36 ................................... GACCAACCCTTGCTCATAAATGGTCATAAGCCGGAT 4805 35 100.0 35 ................................... ATTAAACCCTAGACAAGCGAGTTCTTTTAACTCGT 4735 35 100.0 35 ................................... CTTTTTTCAAAAGAAAAATGGGTTCTAGGAGTCAT 4665 35 100.0 36 ................................... GCCATCTTTCTCCAGTGCATACCCAAAGGGATAACC 4594 35 97.1 39 ..................................T AATGTGTAGGGTCAATTCATGAATTAACCCTACAATTTT 4520 35 74.3 0 T..AA........AA.T....A.C.....A..... | ========== ====== ====== ====== =================================== ============================================= ================== 16 35 98.0 37 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : GCTATTCCTTATCATCAAAAAGCGATGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGATCAGTTATCAGTTATTAGTTAAGTAGGTAGGCGTTAAAAGTTGTCAGACACCCCCCTTATCAAGGGGGGATTAAGGGGGGATCCCCCCGCCTATCGGCACCCCCCTTATCAAGGGGGGCAGGGGGGATCGAACCTAAAATCCATTTTTAATTTAATTATAACCAGCTACTTATCAGTTATCAGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : GATACTTAATTAAGAAAAATCAATGAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTATAGCGGTTCTCGTACCTGTACGGCACACTTAAACCTTTGCTGATTAAGCTTTTCAAGATCGAGAATGTACCTTTTGTGAATGGGAAACGCTATAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTCTTAAACAATCGAGTTTTCTATAGCTTTATGTCCAAATATATAGCCATCACCTTCTCCCCCGTCCAAAGCTTTATTGAAAAATCCCGCAAATTGAGAGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCCGAGCAGTACCACCTAATTAGCCCCGGACTGCTAAACTCCCAACAGGGAATGCCCAACCGT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 1328-640 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDSG01000030.1 Microcystis aeruginosa Sj, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 1327 35 100.0 36 ................................... CAACTGTAACAAGGCGGCTGGTGTTGCCTTGTGCGA 1256 35 100.0 29 ................................... GTCAATGGCAGCTTGGTCGCCATCGAGAT Deletion [1193] 1192 35 100.0 37 ................................... TGATGTTCCCTGCAAATGCCTCAAGGCAAACAACAGA 1120 35 100.0 39 ................................... ACAACAGAGTTGTTTTTTCCACTGTTTGTCCGCATTTAT 1046 35 100.0 39 ................................... TTTTTTCAACTCCTCTTGGAGGGTTGCATTTTCCAAGAG 972 35 100.0 40 ................................... CGTTCGTCACCACTTGTAAGTCTGACCTGAATGCCTAAAG 897 35 100.0 38 ................................... GTCTGCCTCTTCCGTTTGGTTGTTGCGGTCATAGACAG 824 35 100.0 39 ................................... GGATTGCGAGTTTTCTCATAATGAAACCTCATATAAACC 750 35 100.0 41 ................................... CAACTTATCCTGCTGCTCTAAGGCAGCGTTCATCTTCTCAA 674 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 10 35 100.0 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : ACAATCCGATGGCAGTTATATTCAGCGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGAAAAAGCCCTTAAATCTGCGGGTGTTAGTCAATAGGAACAGTGATCAGTTATTAGTTAAGTAGGTAGGCGTTAAAAGTTGTCAGATGCCCCCCTTATCAAGGGGGGATTAAGGGGGGATCCCCCCGCCTATCGGCACCCCCCTTATCAAGGGGGGCAGGGGGGATCGAACCTAAAATCCATTTTTAATTTAATTATAACCAGCTACTTATCAGTTATCAGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : AGAATGCCAGGGATCAATCCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCGAGATTATGCGTCAGTGGGGACAACAATTTCAGAGGAACTTTAACCAGACTGAACTCGGCAGAATAATTTATGCGGGAGGAGATGATTTTTTAGGCATCGTTTATAATAGCCAATTTCCCGGTCCACAACTCAACTCGATCGAGATCGATCGAGTTCTCCACTGGCTACAAACTCCTCATAAGTAGGGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGTTTTGTGGCTTTTCTCGTGAAACAGGTGCAAGATTTTGAGAGAATCGTGCTTCAAAACCTTGCGTCTTCATCGGCCCGCGTCCTGTAGGGGCGAAGCATTCGGGCAGTAACCTATCGGTGAAACCGTAGATTTTCTATCCGAATGCTTCGCCCGTACTTTTTCAGCAAACCCTAAGTAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 27235-30655 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDSG01000049.1 Microcystis aeruginosa Sj, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 27235 36 100.0 36 .................................... TAAACTTAGGTTGAGTCGAAATATTGAATTTTTTCA 27307 36 100.0 38 .................................... ATCAGATTAACAATCTTGTATCATTCAATCAGTCTAGT 27381 36 100.0 38 .................................... ACCGCAAAAAATAGATGTGACCCAAGACGTAACTGACT 27455 36 100.0 40 .................................... ATAAATTCAGTTTACTATGAACTACCTTTCTACTGTTTCT 27531 36 100.0 38 .................................... AGTAGATAGCCCCGTTTTTTGCCCAATGGCTTTAATTC 27605 36 100.0 38 .................................... GAGATAAACAATCGTTCACTGGACGATCCTAACGGTAA 27679 36 100.0 38 .................................... AATCGTTACCGAGGCTATCGAGTGGCTCGGTACTCCCT 27753 36 100.0 36 .................................... ATAACAGGATACTGGTCTATTCTCAGTAGCCATGAT 27825 36 100.0 37 .................................... TCCTTTTTTGGCATCAGAAGATGTAAAAAGCTTAGGA 27898 36 100.0 37 .................................... TGTACCAGAAGCAGTCCCCCTGTACGGCAATTACTTT 27971 36 100.0 41 .................................... GCCCTACAGGGCAAAAATTAAACGAAATTGACGCTATCTGG 28048 36 100.0 40 .................................... AAAAATTCGTTGTTAACAAAGAGCTTGAATTTGTTGCCTT 28124 36 100.0 35 .................................... TAGAACTTTTTCTACAGGATAAGTGCGATCTTTTT 28195 36 100.0 37 .................................... CCGTGGATGATGCCTATAGATAGCGTAGCGAGTGTAG 28268 36 100.0 36 .................................... TTGGTGCGTCGTTATAGCTATTGTGCCAAGTATCTT 28340 36 100.0 36 .................................... TAACTGGAAGATTAAATATGAGTCTGGTACTGTATT 28412 36 100.0 37 .................................... TTTTCTGGACACTTTGTCAGCAATCGTCCGTACTACT 28485 36 100.0 37 .................................... AATACGTTTCAGATTCCGACCCTGATTATTTCTTTGA 28558 36 100.0 36 .................................... GAGTTTCTTATGGGATCTCCTAATAGCGATTTCAAT 28630 36 100.0 38 .................................... TAGCCCTAGACCGATTTCTAAAGTACCAAGCGATAAAG 28704 36 100.0 41 .................................... ATCCAGAGTTTATTAACTGTTACGAGATTGTTACAGTTACT 28781 36 100.0 41 .................................... TCTTTTGGAAGTGATGACGTAAGAAGAGATGTATTTAGAAA 28858 36 100.0 40 .................................... TTTTATTTTCTTTAAACTGGTAAGGCAGAAAGTCACTAGG 28934 36 100.0 38 .................................... ATTGAGAAGATGGATTGCTAGAGTAAGCCTCAAGAAAG 29008 36 100.0 36 .................................... CTTGTGGAGATTTTGTCAACGACTTTATCAACCATT 29080 36 100.0 38 .................................... TTGAGAGAATCCCTGACCATGCAGCCATACCTTAATAA 29154 36 100.0 34 .................................... AAAGATGTTTGATTTTGATAGCTTAAGCTTTGAG 29224 36 100.0 33 .................................... ACGCCGCTAAAATGGGCGTTATTGTACTTGTAA 29293 36 100.0 42 .................................... AAAATTAACTCTGCATCGCAAGAATTTAAGCTAAACTGGTAC 29371 36 100.0 40 .................................... CACAGCCAAAGCGTGACCTCTGAAAGAGGAAAATCGGTAA 29447 36 100.0 35 .................................... CCATCTCTTCTGTGACAGGGATTTCTGCCCAACTA 29518 36 100.0 40 .................................... GCACGGGGTTGGCAGGCGCGGGCCCCTGGGCCCGGGTCGG 29594 36 100.0 38 .................................... GATAACTCTACAGACATAACAACATCATCACTGGGGTC 29668 36 100.0 38 .................................... AGTGTGATTATAAGATACCATCACAGCACCATTAGGAA 29742 36 100.0 35 .................................... TATTGATACGACTCAAGCCGTAATTAACCCTATAC 29813 36 100.0 38 .................................... ACCTTTAGAATTTTTTCGATTAGTTTACGCTGGTTTTG 29887 36 100.0 41 .................................... TTAAAACTCTTGCCATGTCATCGGGTCGGTTGCTGGCTCAC 29964 36 100.0 36 .................................... ATTACACCTTTACTTTTTCGAGTCCACGCTGTTCTA 30036 36 100.0 38 .................................... TTTTCCTCGATAGGAATCAAGGGAAGCGATAGACCGAT 30110 36 100.0 38 .................................... AAAATAAATCACATCACCAACCACTAAGTCAGTGATTT 30184 36 100.0 36 .................................... AGGATTCCGGGGATGCAGTCTCGCTCGTCGGTTGAT 30256 36 100.0 38 .................................... TCTGGAAGGGGAAAATCGGTAAAGGGTATCTTTTGTTC 30330 36 100.0 35 .................................... TATTTCTGAAATTCCCAAGGATCGGCCGCAAGTGG 30401 36 100.0 36 .................................... TTCTTTCATCTTTTGCAAAGAAATCTCATGATCTGG 30473 36 100.0 38 .................................... GACGAGGCGGGAGTCTCGAGTCTTGCTGCTAAGTTCTC 30547 36 91.7 35 ............CTT..................... CCGCTTTAAATTTTGGATTGAAATTTTGTGTTTAT G [30559] 30619 36 77.8 0 ............CTT...............CTCCC. | A [30631] ========== ====== ====== ====== ==================================== ========================================== ================== 47 36 99.4 38 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Left flank : GTTTTCAATACCTACCTACTTAATCATGTTATTTTATGTCATCGCCTATGATATTCCCTGCAATAAAAGACGTAAAAAAGTGGCTGATTTGCTAGAAGGATACGGCCAACGGGTTCAGTATTCAGTTTTCGAGTGTGTTTTAAGCAAATCTCTATACAATCAGTTAAGAGAACGCCTGCAAAAGCAAATCAAAGAAAACGAGGATAGTATTCGATTTTACCCCATCTCTGGCCATACTTTAGCACAAATAGAGACTTTAGGCGGTGTCCCGCTAACTAAAGCGCCAAGTTCTACGATCATCTGATTCGGTATCATCGACTAGCGACGGATAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACAGGATAAGGGTTTTGTGGTTTATGGGGTTGACTGTGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCTGAACCTCAATCCTGTTCGGACGTTTGCCTACCGGCT # Right flank : CCAATCCCTTTCCTGTTGACCCTTGCAAAAGTGCCTCATCTCAACAGACGATTTAAATGCGCGGGCAGCTTATTCTATATGGTAATGTTTAATTGTATTCCCACAAAAGTTGCTTATGTCCTTACCTGAACTCCCTCTTCATCTTCAATTAACCCAAATGGTTTCCGGTTACTGGCTATCTCAGGCCATCTATGCCGCGGCTAAATTAAGTCTAGCCGAGCATTTGAGCAAAGGAACGAAATCTTGTCAAGATTTGGCCTCCCTAACTGAGACTAATCCTGCTGCTTTATACCGACTGATGAGAGCATTAGCTAGTGTGGGAATTTTTCAAGAAACTGAATCTCAACAGTTTATACTAACTCCCTTAGCCGAACATTTATCTAGTGACCATCCCCGGTCAGTAAAAGCGACAGCGATTATGTTAGGAGAAGCCCCCCATTATCAAGCCTGGGGAAATGTGTTACATAGTATTAAAACGGGACAACCATCCTTTGATGATG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 13111-19190 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDSG01000073.1 Microcystis aeruginosa Sj, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================== ================== 13111 37 100.0 38 ..................................... GACAAGAGATGTAAACTGATAAGTGTACAGTCAACAAG 13186 37 100.0 34 ..................................... GAATCATCTCGACACAGTAACTGCAATTGATAAC 13257 37 100.0 35 ..................................... AACTGATCTAGGGAATAAGTTTTTTAGAAACTCAT 13329 37 100.0 34 ..................................... AAAACTTCAATAAATTGCGCCACTGTTACTCCAG 13400 37 100.0 35 ..................................... ATTGCGACGATCCCGCAAGCATTGCTGCTTATAAA 13472 37 100.0 34 ..................................... ATACTACGAGGAAAGTTTGGGTATTGGATAAATT 13543 37 100.0 35 ..................................... TTCGGCCCTTTAGTAAGCGTGGGTTAGAGGTTCAC 13615 37 100.0 35 ..................................... GAAAAATAGAAATAGTAGCACCGCCGGCACCAAGC 13687 37 100.0 35 ..................................... CAAACAAATTATTTGAATGCTCAGCCTCATTCAAC 13759 37 100.0 36 ..................................... AATCATTTGAGAATGGAGAATGGAGATTTTATACAG 13832 37 100.0 34 ..................................... ATCTCTCTTAGGTCTGAGAGAATGACCCGGACTT 13903 37 100.0 34 ..................................... CCTATTTCCTCAGAATTACGGATCAGATTGAAAG 13974 37 100.0 35 ..................................... CCAATTGAGTTACAGTCTAATTTACTAGCCTTTTA 14046 37 100.0 35 ..................................... AAGAGGCCACTAATAGATTTTTCTCTATGGATAAA 14118 37 100.0 36 ..................................... AAACGCTGATTGGCATCATTAGCAAGACCAGCAATA 14191 37 100.0 35 ..................................... TTTTATCGAATGGCTACAAAAGGTCTGTAATCCAA 14263 37 100.0 36 ..................................... TTAAGAAATGATGGTAATTAAACTCTCAAAAGTAGA 14336 37 100.0 34 ..................................... AAGATATTGATATTTAGGCAATTTTGGATAAAAT 14407 37 100.0 36 ..................................... TTGTATATAATACATTAATACTTATTAGTAAAAAGT 14480 37 100.0 37 ..................................... GTCTATTCCTTGAGTATCCGCCTCTAATCTGTCTAGT 14554 37 100.0 34 ..................................... TTGCTAAAATAAAAGGCATAACTGTTGATAACTG 14625 37 100.0 34 ..................................... ACTTGCCAACAAACTGGTAAGGAATGGTTTTTTG 14696 37 100.0 36 ..................................... CTTACAAAAGCCTTAGTTTGCACCTGTTCAAAAATA 14769 37 100.0 37 ..................................... TGTAAATAAGGTTATTTACAATAGAAATCCTTACAGG 14843 37 100.0 34 ..................................... GACGTTGAAGTGATTGGAGAAAGTGGAGAAAATC 14914 37 100.0 35 ..................................... TTGAACCACAACGCTGGGTACTGGACTCGAAAAAA 14986 37 100.0 34 ..................................... AATCGCCAAGTAAATTCCTATGTCAGTATCCCTG 15057 37 100.0 34 ..................................... ATTATTTTCTATTGTTTGTCTATATTTTCCTCTT 15128 37 100.0 34 ..................................... AAGAAGTGCCTCTAAACCAGTAGGCGAGGGCGTT 15199 37 100.0 35 ..................................... TAGTCTAAAATCTTTCATCTCGATTATCCGCTCAC 15271 37 100.0 35 ..................................... GGCATAAACCACCACCAGATAGAATAAGTAAACAT 15343 37 100.0 34 ..................................... GAGGTGTCCAGGGTGGGTGGCTGGCGGGAGATTT 15414 37 100.0 35 ..................................... AGATTTAGAAAGTAAACCACCCTCAGATTTTAAAG 15486 37 100.0 40 ..................................... ATAATATCATCAAACGGATCGTAAGCATCATTACTCCACT 15563 37 100.0 36 ..................................... CCAGATAATAACTTTCGCTCCAAAACTATTTTATAC 15636 37 100.0 35 ..................................... AACCTCCTGTTTACTTATTGTTTACACTCTCTTTA 15708 37 100.0 36 ..................................... AGTTTGACATCGTTGGCTGTGACAATTAAAAAACTG 15781 37 100.0 36 ..................................... AACCTCGGCGGTGGCTGAAACGCCGTCGCCGTCTGC 15854 37 100.0 36 ..................................... CTGAGATTGTCGATTTCCAAAACGCTACCCTAACGG 15927 37 100.0 34 ..................................... CCGTAATTGTCACGGTAGCTCCGATCGCCCCTTG 15998 37 100.0 34 ..................................... ATGCTTAAGGAAGATCAGGAAGAACTAGATAAGA 16069 37 100.0 36 ..................................... AAATCAAATCTTGATTTATTAGTTATCAGCTATCAG 16142 37 100.0 38 ..................................... ATTGGCTTGCAGTAATTAGCTTTCTTCATTTTTTTATC 16217 37 100.0 34 ..................................... TTGATCCTGAAACAGGAAATCCTGTAACTTTTGA 16288 37 100.0 38 ..................................... ACGAAAGAATCAGGGTTACAGGCTTTGGCTCGACAAGA 16363 37 100.0 40 ..................................... CAGTAGGGGTATTTTTTCTTTGGTAAGCGGCGACCATATT 16440 37 100.0 39 ..................................... AAATTTAGGGCGACTGAGGAACTTCAATTAATAACTCAA 16516 37 100.0 41 ..................................... AAACGGGTAAACTAGCCTTGATTTACCCCGAATAATCACTT 16594 37 100.0 52 ..................................... ACCAGACAAAAGCAGGGCGGCAAAGGGGGCGGGGTTCCAATTAATCTTAAAC 16683 37 100.0 35 ..................................... GCTCGGTTTTACGCCACCGTGTATCTGTGTCTCAA 16755 37 100.0 38 ..................................... TTCGATATCCATATCCTGCTCGATCGCTCGTTGTCCCA 16830 37 100.0 36 ..................................... ATGCCCTCTGCCGGAGGGGGAGGCTCCTGCTCACCC 16903 37 100.0 39 ..................................... TAAATCCCACGATTCCATCGTGATTTGAGCCATCACCTC 16979 37 100.0 36 ..................................... TAATTCCGCTTGATTAGTTGTTACTGTGGCTGATGC 17052 37 100.0 34 ..................................... TTTTATTATCTTCCAAACCGCACAAAAGCCCGAC 17123 37 100.0 37 ..................................... GCTAAATCGGAAAATTTGCCCCGATCAAAATCTGCTT 17197 37 100.0 37 ..................................... CTATCCCACTATTTCTCGATCATCAATAAGCTGCTAG 17271 37 100.0 35 ..................................... ATTTTTTTCCATGAAGCATTCATCCAAGCGATCGT 17343 37 100.0 35 ..................................... ATTTTCATCTTTGGCTAAGAGAAAGAAAAATCAAA 17415 37 100.0 34 ..................................... AGTAAACATTAACTTTAGGACTAGAAAAATGTAC 17486 37 100.0 37 ..................................... AGGAGATTGTATTCTAGATTTTTGATCTGAGTATCGA 17560 37 100.0 34 ..................................... AAGTTCAAGATTTGGCTTGGCGCAGTCCCCGTAA 17631 37 100.0 33 ..................................... GAACCGACTCAAACACCCGACATATACTCGCTT 17701 37 100.0 37 ..................................... CCACTGCAAACTTATTCAGCCACCGCCGCAACTGGTT 17775 37 100.0 34 ..................................... GTATCATTACGTTGAGTTTGGGGCGCAACGTAAG 17846 37 100.0 34 ..................................... GTTTACCGTTGTCACCGTTGTAAGCCGCACTGTA 17917 37 100.0 34 ..................................... CATTAGAAGGAACCAGATATGGGCATCCGCCCAC 17988 37 100.0 37 ..................................... TATCTTGTTGACACTCTATACAGGGGAGAAAAAAGAT 18062 37 100.0 36 ..................................... ATTTTATGGGCTAATTGGGCATTTCTCCCTTTTCTT 18135 37 100.0 34 ..................................... TACGGATTCGGAGAAGAACCTCCTACGCGAGTAG 18206 37 100.0 37 ..................................... TTGATCACGATGGTATTGAACTGATTATCAATACCGA 18280 37 100.0 36 ..................................... TCGTTTGGCATTGTGGATAGACTAGCGACTAAAACC 18353 37 97.3 35 .......................A............. TTAGCCGTGGGATCAAAATCACTAATATTAGCCTT 18425 37 97.3 34 .......................A............. ATTGAGAATACCTATAAATCCCCTCTCAAAAGGA 18496 37 97.3 36 .......................A............. AGTCAGTGCCGGGTACAGCGTGCGAAGCTTATCGAG 18569 37 97.3 35 .......................A............. TTGATTACTTGAGCTTGGGCGCTGGTTCCGATTAG 18641 37 97.3 35 .......................A............. CTTAAAGTCTCAAAAGCTACGATTAGAAATCATGC 18713 37 97.3 38 .......................A............. CTGCTAACGCTAGAATCGGTAATATGATTGAAAAAATT 18788 37 97.3 35 .......................A............. TGGCAAGCAAAAAACAGCCTTTTGATCTTCTCGAT 18860 37 97.3 35 .......................A............. GAGATAGCGATCGCTGATTGAAAAACTAATTACTT 18932 37 97.3 38 .......................A............. GGCAGTCAGTGCCGGCATTGCCGTGGCGATCGATAATC 19007 37 97.3 38 .......................A............. TCAATCGGTAAGCTTACAAGCTTCTCAGTCTCGATCCG 19082 37 97.3 35 .......................A............. TTAAAATGAATGAATTGTTGACCGAAATTTTACAG 19154 37 97.3 0 .......................A............. | ========== ====== ====== ====== ===================================== ==================================================== ================== 84 37 99.6 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTTGTTGTCAGTTACGACATTTCCGACGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCTAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGTATCGGTGGTGAGTTACCCCGGGATAATACGATTTTTTTTGTTTAGCTCGGTTGCGCCTCGGAGTAGCTGTAAAAATCCTTAACTATTATCTGGTGGCTGGAAAGCTTATGCAATATAGATTCGAGATGATTTTCCTTTCTAACGCGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGGTCTTGAAGAACTGGGTCACTTGCTGTACAATAGATTTATTGCGGGTGCGGCGCATACGAACCTTGAAAACCCCATAGCGTATAGCTTTTACCACTGGGCG # Right flank : CCCATAGAAATGAGCTATTAGATTAGTCAGTCCAATAGTTCCGTTCCAATTAATCTGGCTCTTCGGTTTGTGTTATGCAATGGACTGGGGCTATAGGGGATGGAACCCTTATGTAGAAAGGCATTTGGCGATTTTTGTCAATTGTTTTTCATCTAAAGCTAACTCATCAATTAAGTCTCTTGCCAGATAAGGATTTAGTCAATTTATGCCCCCCTATCGAACCATACCAAGTAACGAAGAGCCATTTATTCCTCCTGGTTCTTCCGAACTTACACTGTAGAAAATTCCCCAAGCTCCCTCTCTGTCCAGCAATGCTCTAAAGTTGATAAATATCAATCTAACAAAAACTCAAAGCCCTAGTATACAAGCTTTACAAGCATGAGTTGTTGATAGTTTTGCATGACAGGTTCGTTAGAGCCTTCCTCCTTTTGCCTCTTGCCTCTTGCATGAGTGCCTGTCCTGATATGTAGCCTATACTAAACGGATTTAGTATTACTCGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA //