Array 1 237379-237952 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB946327.1 Enterococcus phoeniculicola ATCC BAA-412 acvKl-supercont1.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 237379 33 97.0 36 ...........C..................... TTCCATGGAAGGATTTAAATTAATAGGGTCTACTAC 237448 33 97.0 33 ...........C..................... AAATATTAACATTGCAGAAGAAAGAGAAATTCG 237514 33 97.0 33 ...........C..................... TCCTGATTATATAAATGCTTTAAATAAAATAGA 237580 33 100.0 35 ................................. AATCACTTGCTCGTTATTATCTGGGGATACAGTGA 237648 33 100.0 34 ................................. GCTTTAAATGGACAGTTGACTATGATGGTCGTAG 237715 33 100.0 36 ................................. ATGTGATTGCGGCAGAAAATATAGGGAGGTGGACAC 237784 33 97.0 36 ..................T.............. TACTGCATTGATTGTTTGTCTTGTCACATTGACAGC 237853 33 93.9 34 .........C...C................... ATCAACAGTTAATCCGTACATGTTGATGATTGAT 237920 33 81.8 0 .........C..............T..GCT.C. | ========== ====== ====== ====== ================================= ==================================== ================== 9 33 96.0 35 GTCTTGCCCTTTATAGGGCAAGTGGATTGAAAT # Left flank : ATTGAAGAGTTATTGAGTAATCCAGGGATTATTCGTCATCCGTTGAAAGTAAAGGCAGCAATCAATAACGCACAGAAATTCTTGGCTATTCAAGAAGAATTTGGCAGCTTTGATACCTATATTTGGGGATTTGTTGATGGTCAGCCTATTATGAATCACTGGAAGGAAATGAGCGAAGTTCCAGGAACCACAAAGCTATCTGAAAAAATCAGTAAAGAATTAAAAAAACGAGGCTTTAAATTTTTAGGAAGTACAACGGTTTATGCATTTATGCAATCAATTGGGATGGTCAATGATCATGTGGAAGACTGTTTCTGCAAATACTCAACAAAATAAATAAGGTGCGGATGTGAAGTGGACATGAAATCCCCGGGACATCCGCACCATTTTTTGCGTGAAAAGAGAGGGGAAAACCCTCTTTTTCTCATACATATTTAATGTTATACTAAATGAAAGACGAAAAAGGGAAAATGCGTTCGTGTAACAGCCCTGTTTTCGCC # Right flank : TGTTTATTTATTGAAAAGAATGGAATTTTGTGAGCGTTCATCAAAATTCCATTCTTTTTTTGATAGTTATTTCTTTTTTGTTTGATAGTGTTCATAGCGAGCAATCCAATCAGCTGGGCTCATTTTTTTCGCGAGTTCTCCCATTAACTCATAAGGGATTGTCTTTGGATTAGTGAAGCGAATACAGCTTTTTCCCATATTTAGCTTTGTGGGTACCTGTTTTTTATATTCTTCTTCAAACCATGAGAGTAGAGAAGGATTGCTCATGATTCCCATGTGATACACAGCGAAATGATTCTTTTGTGCGCCAAGAGAAAGAAAAGGTAAAGGCTCATCTGGTCTATTTAAATAACCGTTTGGATAAGCACTTAGAGGGACAACAAAAGTAGGCATCCCATATTGCAACACAAACTGAAATCCTTCGGGGAGGTTGGTAAGAAGCTGTTCTTTTAGTAAAAAGTAGCTTGATTGCCATTTCTCCGGTAAATTCGCTTCGTATT # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGCCCTTTATAGGGCAAGTGGATTGAAAT # Alternate repeat : GTCTTGCCCTTCATAGGGCAAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 1282292-1282124 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB946329.1 Enterococcus phoeniculicola ATCC BAA-412 acvKl-supercont1.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1282291 36 100.0 30 .................................... TGTTTTAGTTTTTCATATTCGTCCATTCCT 1282225 36 100.0 30 .................................... AGAAATAATGCCTGTATGACCATAATTGCC 1282159 36 75.0 0 .........................A.C.AGCGCTT | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 91.7 30 GTTTTAGAGCCATGTTGAATTGAATGCTTCCAAAAC # Left flank : AGAAAATCCTGAAATGTATCAGAATATTGTTGTATCAGATAATCTGATTACTTATGAAGTTCATCCTGAGGGTGAGTATTTTATTCGATTGGTAGACGCAGATACGATTGAACTAGTAAATAAAGAAAAAGAGAATGAATATGTTTTAGGTATCTACAATAGAAAATAAGGGTTGTGAAATATCTGTTGTGTTAGAGAGTCTTTGTTCCGGCTAGTAATGAATAAACAAGAAATAAACGATACTCAAAAAATGAATGGAGACTATCCACACAAGCTAAATGTACATTTAGCTGTGTGAATACGATACGATGTATCCCACATGATATATAGAAAGAATAGTTATAAGAAGATAAACCATGTTATAATAAATAAGGAGTGAATTCAAATAGCTTATTGAAAATTTTATAATAAATAGAAATGAGAAGCATTCAAAGCTGAAGTCTTGCTATGGACAAATGGCGCGATTACGAGATTTCGCAGGGAAAGAAAATGACTGCGAG # Right flank : GTTACATTTAAAGGCTACTAGAATCCCGGAAATGAAAGCGTGTTCTTTTTCGTGGCGGAAGTGAGTGAAATCCACATCTTGCTTATTTTTACTGTATAAAATGGGATAAAAGAGTAGGTTTCTGACCCGTTAAAGGTGAAAAAGTAGGATAATATGGAAGGAAATCTTTCGTATTTAAACGCGTATGATATAATAAGTTATATATTTCTACTGTTTTATTTATAAAACGCAACAAAAAAAGCACCGAATCAGTGCTCTATAATTGGGTACGGACAAAGCCTTATTTTAACTCGCTATGTTGAATTGAATACTACCAATAAATTCATTATAGCATGGAAATCGAAATATTCAATTGTTTAATAAAAGATTATGAATAAAAAAATGAATAAAGGAGTTTGGTGATGAAAAAAGAGTATACGATTGGTTTAGATATTGGAACAAATTCCGTTGGATGGGCCGTATTGACTGAAAATTATGATCTTGTCAAAAAAAAGATGAAA # Questionable array : NO Score: 4.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCCATGTTGAATTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 88% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //