Array 1 979647-980875 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027717.1 Pseudomonas chlororaphis subsp. aurantiaca strain PCM 2210 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 979647 28 100.0 32 ............................ AGGTAACTGCTGATGCAGATATTCATCACTAG 979707 28 100.0 32 ............................ GTTGGCTCAGTGCTGATGCGCGACGCCGGGAC 979767 28 100.0 32 ............................ TGGGAAGGCCACGGCCAGAACATCGTCTACGC 979827 28 100.0 32 ............................ AATGAAGAACCCGGCGCTGACCGCCGCTAACG 979887 28 100.0 32 ............................ TTGAGCCATACGAAGTTCAGCGGGTTTATCTC 979947 28 100.0 32 ............................ TAGTTGTCAGCAATACGGCCAACGTCGAACTG 980007 28 100.0 33 ............................ ATCCGTTACTGACGCTTCTTGCATTTTCTTAAA 980068 28 100.0 32 ............................ TGGTCACGCACGCCAGGGCCACCTGGCACGGT 980128 28 100.0 32 ............................ AAATCGACGTTTGCGCTGACGTAAGTCCAGCT 980188 28 100.0 32 ............................ ATAGCCGCGCGCAACGCCGGCGTCTGCAAGAC 980248 28 100.0 32 ............................ TGGTTGTAACGCTGATCGCGGCTAACCACCTC 980308 28 100.0 32 ............................ AGACGAAATGGACATTTGAGGATCTGCAGCAT 980368 28 100.0 32 ............................ AGATACCGCGATGCCACAGGCCATCAGGTCGG 980428 28 100.0 32 ............................ CGGCACCAGTTTCGGTGCCGACCAAAGCACCC 980488 28 100.0 32 ............................ AACAAGCGGCGCCGTAGCCGCTACGTCACGAG 980548 28 100.0 32 ............................ AGGGGATCAGGGTGTAGTTGTCGGGCATGCCC 980608 28 100.0 32 ............................ CTACTGCTGGCCGAGGCCGGCGAAACCTTCAT 980668 28 96.4 32 ...........A................ CAGGATCGCGCCGAACAAGAGCACCGCCTGTT 980728 28 96.4 32 ...........A................ ATCTGCGCTTCGCGGCCAGCGTTGTAGGACTG 980788 28 92.9 32 ...........A..........C..... AGCCGGGCTTTTTGGTTTCTGCAATTTGGCTA 980848 28 67.9 0 .C.........C.C.......CC.AGCG | ========== ====== ====== ====== ============================ ================================= ================== 21 28 97.8 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : ACCGCTCGGTGCTTAAAGCGCTTAAAGAAACAGCCAGCTCTACCATTGGCAACAACTCGCTCTTCACCGTCCGCCCAGGCATCAGCGCCGAAGAGGCGTTGCTGCATGTGTCGATGCTGCTCAAGTCCGCCGAGGAGGTTTCCGACGAGATCACCGAGCACGCCAGCGGTATCGAGCGAGGCCTGATCTGGTCGCTGGTGCATTCCGTGGAGATGGCGCGCGGTGTGGTGGATGCCTTGCTCGATGGTAATCGTCTCTGATCGACAACGGCCCGCTGGCCGCGATCCTCCTTGAGATTCGCGGCTGGGCGGGCCAGCCAAAACGGATTCATGGCGCTAGTCTGAGCGCCGGTGTTCTGTCCCTGACGCTGACCCTTTTTTCCGAACGGATTCCGGCCCTATGTAAATCAAACACTTACAAAGGTCTCTAGAAAGAGGAGTAAATATGGTGTCCAGCATGATTTCTCTTTGAAATCATGGCGCTATTGGGATATCTGTCTA # Right flank : GTTAATCCATAGCATCAGTCCGCGTTGGGAGATAACACCGCGACCCAGTTCCCAATCTCACTCCACAACCATGCCACCTACCAATCCCACCCCTTGTCATATCCCCTTCATCGCCGCCTACTAAGGTTTGCTTTTGACATTAAGTCAGGGAGCAACCATGAGCGATTTCACTCTCGGTCGGCGGCGTTTGATTCAGGTGGCGGGGGCAGGGCTGTTGCTGCCGGGGTTGGCGCCGGCGGTGATTGCCTCAGGCAAGGACCGGCCGAAGATGGTCGATGGCGTGCAGTCCGGGGATCTGCTCGGCGATCGGGCGATGGTCTGGAGCCGTACCGACCGGCCGGCGCGGATGGTGGTGGAGTGGGATACCCGCAGCCTGTTCAGCAACCCGCGCAAGTTTGTCTCCCCCCTGGTCGATGCCCGCACCGACTTCACGGCGCGGGTCGAGTTGGGTGGGCTGCCCACCGACCAGGCGATTTTTTATCGGGTGTACTTCGAAGACG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //