Array 1 12732-11707 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDZV01000005.1 Staphylococcus epidermidis strain DE0351 NODE_5_length_165258_cov_87.642895, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 12731 36 100.0 30 .................................... GAGTGATTTTTATATGTCTTATTCCATTGT 12665 36 100.0 30 .................................... TATCTTTTATGTTGGAACCAAATTCAACTG 12599 36 100.0 30 .................................... TTGTAAAAGCTAAAAATGAGGAAGAACTGT 12533 36 97.2 30 ..............................T..... CAACCGAAATAGAACAAGCTATAAAAAATA 12467 36 100.0 30 .................................... GAAAAATTCATTCACTCAATGGGAAATCAA 12401 36 100.0 30 .................................... TGTTTATTCAGTTTTGTGATTTATATAATA 12335 36 100.0 30 .................................... GATAAGACGTTTACTCATAACAGAAACAGC 12269 36 100.0 30 .................................... TCTTGCCTCTTTGAACAGACCAGAATACAC 12203 36 100.0 30 .................................... TGTTTATTCAGTTTTGTGATTTATATAATA 12137 36 100.0 30 .................................... AAATCGCTCATGCGCATCACTACACAGAGG 12071 36 100.0 30 .................................... GTCTCTCGGACGTTGGTTCGGTTGGCTAGG 12005 36 100.0 30 .................................... CTTTGCTGTTCTTGTTGCTGTTGTTCTGCA 11939 36 100.0 30 .................................... ATATGAACACATTAAGCGGTTTAGATAAAA 11873 36 100.0 30 .................................... TTATCTTCATCATTTGGACAAGCCCACATG 11807 36 100.0 30 .................................... ATAAACCGGTCATACCTCTTGCCCAGTATA 11741 35 94.4 0 ................-..................C | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 99.5 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT # Left flank : ATTATCAAGCAAAAGAAAAATCATTTGTAATCTATTTATATCCAGAAGCTGGTCTTAGCATTAAAGAACAAATAAGATTTAGGAAAATACTAAATAACTTACCTGTTCCGGTCATTGTTTTAACCGAATCACCCCGTTTTTTATCTGAAAGTATTAAGGGACTAAATTATTTTATTAATAATATTCAAATGATTACAGAATCTTTTTTTGAAGATAGCTATTGGAATGCGCCAATTAATGTGGAAAAAGAACGGATTAAAGAGAGGTTTGAGTATTTATTTGTAAAATATTGTTCAGTTTTAGAAATAAAACCGATTATCTCTAACTACTTGCTTGCGGATATTATTGTTTTTAATGATATTGATCTTTATATCATTGTTTCATTTTTAAAACATTGTAATTTAGAATATCAATTAGATATCGATAAAACAAAAATTTCATTAGCGTTATCAACTTATCTATTTTCTTAATTATAATTCAAGGTTATAATTGTGCTAGAG # Right flank : CCTTTCTTGAATGTCATTTCTAAGTTGTTTGCAACAGTTTATGGTTATTTAGAGAGCATAGTAATGAAAAATGGGATTTAGTACCAAAAGCAGGACGCTCACCATATGATAAATATAATGACGAGGAAACTTTTTATGCGTGGAAACGACAGGCTATGATATTTCTGAAAGAATCATACAATGATTGGGATATGTTAACGATTGCACAATATCATGGGTTAGCGACGAGGCTATTAGATTGGAGTTTCAATCCATTAGTAGCAGCTTATTTCGCTGTGAAAGACTTTGAGGATTGTGATGCTGTTATTTATGCTTATTTGAAAAAATCAGATATTAATGTCAAGGAAGTACATCCAATTGAGAGTAAGGGAATAAAGAAAGTGAAACCAAATGGACTAGCAACAAGAGTAGTAAGACAAAGTGGTATTTTCACAATTCATGAACAACCAACTGCGTCTATTGAAGATAACTTATCGAAAAAAGAAAAATTAAATAAAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //