Array 1 1551562-1552010 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP022431.1 Enterobacter kobei strain STW0522-51 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1551562 28 100.0 32 ............................ GAAAAGAGTTATGTCACGATGATTAAGAGTCG 1551622 28 100.0 32 ............................ ATCGCCGGGGCCGACTGCGTCATCGTCTGCTC 1551682 28 100.0 33 ............................ TCATGACGTGAAGGTGGTTTGTTGCCGTGTTGT 1551743 28 100.0 32 ............................ GAACCACGGATGGATAAGCTCGCCCGGGCCGG 1551803 28 100.0 32 ............................ GGAATACTTTCAGGATTCGAGCCGGGGATCCT 1551863 28 100.0 32 ............................ GGTATCTTTCCGCGCACCACGTCGCGGGCGTA 1551923 28 100.0 32 ............................ GTCTTTTGCCCGCATATGCGCGTTTTTATAAT 1551983 28 75.0 0 ..........A....C.....AACC.C. | ========== ====== ====== ====== ============================ ================================= ================== 8 28 96.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCACAAGTTATTCGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGGTTACCGGGGTTTATCGCCTATGGCGTGTTGATTGGCGAAGTGGTGGCACCGATGTTGATTATTGTCGGCCTCTTTACGCGCCCGGCCGCGCTGATGCTGGCGTTTACGATGATTGTGGCATGGCTGATGGTAGGAATGGGTGAAACGTTCGCCCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATTGGCTCGCTGGCGGTGGCATTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCGGCGTGGCGTTGAGGTTTGGGCTCTGGTATGAAGGAAAGGGTCTATGGACCCTTTTTTATTGGCTGTTTGTAACTTATTGATTTTATTGTGCTGAAATGTATGTGAAGAAAAAAGGGATCGAGACGATTTTTTAGGTTATTTCTTTATCTGACAAAGTGATAGGTGTAGATTGTTCCA # Right flank : ATGTAGTTCGGCACAAACACTGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGACGATCCAGCCCCTACAAGGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAACGGGGCACCGCGTCAGATTATGCGAGGACCAGATCCCCCTGCGGATGGCATGAGCACGCCAGCACGTAACCTTCGGCAATTTCCGCGTCGGAGAGCGTCATGGTACTGGTGACAGTGTATTCACCTGAAACCACTTTCGTCTTACAGCAACCGCATACGCCCGCACGGCAGGCGGCCACTACCGGCACCTTATTGCTTTCGAGTGCCTCCAGCAAAGTCGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTAAACTGAATCCCGCTGGTTGCCGCCTCCGCTACCGGCGTGAAGAATTGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCCTTCACTTCTTTCTCGACGATATCCATGTAAGGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1567022-1567709 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP022431.1 Enterobacter kobei strain STW0522-51 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1567022 28 100.0 32 ............................ GTTAAAGAGCCTTACTATGGCAACGTAGCTAC 1567082 28 100.0 32 ............................ GGCTGCGGGTCAACCTGCTGTTGTTAAGCATA 1567142 28 100.0 32 ............................ CTGGCACGGTGATCGGCTTTGGCTCCCGTAAA 1567202 28 100.0 32 ............................ CCGAAATTTACCGAGGCGTTAAACTGCTGAGT 1567262 28 100.0 32 ............................ AGTCGCAAAAGACGCGCTCGTTCTCTGGAGTG 1567322 28 100.0 32 ............................ TGTTGTGTCATCACGACCTTGAGCATAAAAGT 1567382 28 100.0 32 ............................ AGATTGCGAAATGCATCGCGGAAACGTGGGTT 1567442 28 100.0 32 ............................ TGAAGATGGGCTATGCAGGGGAAAAGGGATCA 1567502 28 100.0 32 ............................ AGAAACAGTCGTCATAAGTGCGGCCGAGCCAG 1567562 28 96.4 32 .........T.................. GACAGCCAGGTAACGAACGCCACCAATGATAT 1567622 28 92.9 32 A..............T............ ATCGAAACGAAGCATCGACAACTGAGCGAAGT 1567682 28 71.4 0 ...........C.........ACCTCTC | ========== ====== ====== ====== ============================ ================================ ================== 12 28 96.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAGACGCAGCCCGTATGCCGTTGCCTTGGTGCATACCTGGAAGAAATGAAAACCGGCCTCACAGAATCAATGCGTGACTTTCAGGTGGTGGAATTTGAGAACGAAGCCGAACAACCGCGACAAAAAGAGTGGCTGCTCGAAGATACAGAAACGAAATGCGACTACTGCCGGGCATTAAACCATGTGCTGCTGGTATCGCATTTTGACCGCGATATGTTGCCGCACCTGACAGGATTACTGCATGACATCACGTATTCAATGGCGGCAGATGTGGTATCTCCCCATGATGCTGGAACGGGAAATTCTGTTATTTCTTGAGTGGAGTGCACACCGCCAGGGGCTGTCCCCTGGCGACAACGGAGAAACCCTTTTTTTGAGATGCTTTATAACTCATTGATTTATAATGTTTGATTTTACGTTGCAGAAAAAAGGGTTCAGCCTGTTAACGTTGCTTAGTTGCCTTAATAACAATAAGATAGCGCTGTTTTCTTCCA # Right flank : CAAACCAACCCACTGTAATATTCACCAAACCTATTTAAAACCTTATACCATCCAATCTGCACTCTCTATTTTCACAATAGATAAAAAACCTATTCACGCATAAATTATATTCCAGCAAATATATTATTCGTAAAAATAATATATTGTCATGAAAACATGATTTCCCACTTTATTACCACGATGATTATTATTCATTTGATGTCCGTCACATTTGTTTTCATTCGTTCTTCGCTAACATACTGTGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTACCTGGAAAAATGCCGCATTCAGGTGAATGGTGGCCGTGTTGAATATGTTACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCTATCGCTAATACTACGGCGGTGATGCTGGGAATGGGAACCTCCGTTACACAAATGGCAATGCGGGAG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 1569624-1570372 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP022431.1 Enterobacter kobei strain STW0522-51 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1569624 28 100.0 32 ............................ ATGAAACCAGGGCGGCGACCGCTGGCGCCCGG 1569684 28 100.0 32 ............................ GCTTCATGACTTCACATCACACGGCGCTGACA 1569744 28 100.0 32 ............................ AGATACGAAATCAGTACCCCACCACCGTACAC 1569804 28 100.0 32 ............................ ACATACACAATCCCTGTGGGGATTAATTCTGG 1569864 28 96.4 32 ............G............... TACATCGCTGAGATTGCCAAGAATACCCCAAG 1569924 28 96.4 32 ............G............... TGTGACACTAACTTCACAGCGCAACACCTCTC 1569984 28 96.4 32 ............G............... TCTATAACCTGGAAGAAGGATTCGCAGTGGTT 1570044 28 96.4 32 ..G......................... AACATTCGGCGAGTGTTCTGATGAATGGGTCT 1570104 28 96.4 32 ..G......................... GGGCCGCCCCTTTCCACTTCTTCATCAGCGAT 1570164 28 96.4 32 ............G............... TATCGTGCTGACTTTGAGGATTTGCCGACCAT 1570224 28 96.4 32 ..G......................... ATCATCCCGGGTCAGCTCGTCACCAGCCGGTA 1570284 28 96.4 32 ..G......................... TTAAATGCGCAGAAGTCACCGAAGTTGTTCAG 1570344 28 89.3 0 C.C............C............ | C [1570368] ========== ====== ====== ====== ============================ ================================ ================== 13 28 97.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CCGCAACACCGCCGTAGCCTGCCACTGGTTGAAAAAAAACGGACAAACCGAGCTGCTGTGGATTGTCGGGAATTTGCGACGCTTTAACGCGCAAGGGCGCGTGCCAACCAATCGCACGACCCTGCAAATTATTCGCAATGACAGCGAACATCGTTGGCAGAGTGCGGAAAGTATCGCCCTGCTGGCGGCGATCGCCGGGCTGTTTCATGATTTTGGTAAAGCGGGGATGTGCTTCCAGCAGACGCTTAAGGGAGAAAGCAAGCATATTTGTCAGCCGTACCGTCACGAATGGATCTCGGTTCGTCTGTTTGAGGCCTTTGTCGGGGAGCAATCCGATGCGCAGTGGCTGACATCGTTGACACGGCTTAACGTTGCTGACGAAAAGGCCATGCTGAAAGCGCTGAAGATGGACACAGACAAGAACTGCAGCCTTTTGGGAAATCTCCCGCCTCTGGCGAAAGTGGTGGTATGGCTGATATTGTCGCATCACCGTTTACGGA # Right flank : AATAGAAAATAAGGTCTCCCCCTCCTTACTTTCTACACTGTCGAGCCGACAGCCCCGCAGCTGAAACGAACCGCCAAATAATTGTTCAAATAATCGACTGCGCCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCG # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //