Array 1 282078-284324 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009524.1 Methanosarcina sp. Kolksee chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 282078 37 100.0 36 ..................................... TAAAATTAAGAATAGTTCCGTTTGTGTAATCAAAAA 282151 37 100.0 36 ..................................... TTACGTTGAGAACCGCTATCACACTACTTTTGGCCT 282224 37 100.0 37 ..................................... TAAAAATAGTCCGCAACGTAATATACATAAATAATAT 282298 37 100.0 36 ..................................... ATATAGTCAGGAAATTCATCATATACGGCATGTGGA 282371 37 100.0 37 ..................................... TCATGAACAACCTCTTTAAGGGTACTGTGTTAAACCT 282445 37 100.0 35 ..................................... TCAATCGCTATTCCCACATAGTAGGACCCGATGGT 282517 37 100.0 35 ..................................... CCTTTTGAAAAATATGTATAATAACTCCTATTATC 282589 37 100.0 36 ..................................... AAAGTTGAGTATTGATCCCGGCTTTTCCAAGAGTAG 282662 37 100.0 38 ..................................... ATACCTCTCCAACTGATAGGGGTTTCTTCATTTTGAGA 282737 37 100.0 43 ..................................... ACCACTTCGAGATACATCCCCGAATTTTCATTGAAACATGACC 282817 37 100.0 36 ..................................... TTTCATTTCTTTCTGTTGTTGATGCGAAAGGCATAT 282890 37 100.0 36 ..................................... TTGATTTTGTTTCGTAGTCTAACAAGTAGTAGAGTC 282963 37 100.0 41 ..................................... TTGGGTCTCCGTTTTCGTCTACTTCCTTCCAGTATCCAATA 283041 37 100.0 37 ..................................... AAACAAAAAATGGTTTTGAAAATTATGTATACCGCTA 283115 37 100.0 36 ..................................... GAGTATCTTCATAAACATGATGATAAATGTTTTGTT 283188 37 100.0 37 ..................................... TAACTCTGATGTACACTAGGATAAGTTTTGTGTATGT 283262 37 100.0 36 ..................................... TGACAGACCCATCGGGCTGGACTTGATCAACACTTT 283335 37 100.0 36 ..................................... TCTTGAGTGGCAATCATTACAATCCCTCAAATACAA 283408 37 100.0 36 ..................................... CAGTAAGTTACTTATATGATACTGTAGTATATTGAA 283481 37 100.0 38 ..................................... CCTTGTATATCTGCCATAGTTGTTACCTGCAAAAAAGA 283556 37 100.0 35 ..................................... GATAATGGTCTCTTGTTTCTTCTGGTAACGTAGAT 283628 37 100.0 36 ..................................... TTTCTGTAGCCCTGTCTAGAGGAGAGCCGGTGAATT 283701 37 100.0 38 ..................................... TTACATCATATCCATCTCTAATTGGTTCAAGTGCTCTT 283776 37 100.0 34 ..................................... GAAATCAGCGTCTTGCAAAAATGGAAAAGGAAGA 283847 37 100.0 35 ..................................... GAAATTTGCTTCCTGATTTGGAACCCGCCGACGAA 283919 37 100.0 38 ..................................... GACAAATGTTTGAATATCGTTGTACCATAGTGGGCTAC 283994 37 100.0 36 ..................................... CTGTTTACATTTGCCGCACAATCTCTTTTTAAAAAA 284067 37 100.0 37 ..................................... TAAATCTCTGCACCGTTGGCAACAACATAAATAATAT 284141 37 100.0 36 ..................................... CTTTCTTCTGGTATTCATCCGATGAAAATATATCAT 284214 37 100.0 37 ..................................... TTGACAGTGTAAAACAGTATTGGTTTGATTTGAAGAA 284288 37 97.3 0 ......T.............................. | ========== ====== ====== ====== ===================================== =========================================== ================== 31 37 99.9 37 ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC # Left flank : TTGTCGCCTATCAGTAGTGTTTTCAGTAATCTCAAATCAGTTAAATAACACGTTTCTGAGAAAACATAATTGTATAGTAATACTTTTTTGATAAAAATTAAGATGAATTAGACTAAACCTGTTTTGCTATAAATACATTCCTAAATATATGTAATACAAATTAGTAATTATATAAAATTAAATAATACAAAATAATATTTAATTCGTTTGTTAGTTTTGGATCAATTCGGGTTCTGGATGAAAAAATAGTTTAAATTTGGTGTTTTTAAAAAATAACTAAAGTATTGCTGGATTAGGTCAGTCTTTGAATCTATTTAAAACGACTTAATATACAAAAGTTAAATAGAAAGAAAGGCATATACCAGAATGTTTCCAAACTGCTAGAAAACCTGTTTTTCTTGTATTTATAAAGGGTTTGATAATTTTCCAGCAAGAATTTTAGCCCCCAAATTGGGCTCATTTCAGGCCTTTTCTAGCCAAATAACGGAAATTTTTGCCCT # Right flank : CCCTTCAAATACAAGACGCTGCAATCTCTGCTTACTCTTCAGCTTTTTATCGAATTTTGTTGGAAATTTACTGGATTTTATCGGAAGATAAATATCTATTAACAGGTACTGGAGAATATTAGAGGACGTTCATTCAGGTGGATAACTTATGAAAGATGATTTTAAAAATATATATCAGTTTAAGATTTCAATGAAAGGAATAGTTCCTCAGATCTGGCGGCGAATCCAGGTACCGGAAACTTATACTTTTCTGGAACTTCATAATGCTATTCAGGCTGCAATGAATTGGGAAGATTACCATTTGCACGAATTTGAAATGCAAAACCCAAAGACCGGGATGCTTGACAGAATCGGGACAAAAGTCAACGATTACGAAGTTTTCAGTGACGAATCTCTTGTGCCGGAAAAAAAGGCTAAAATCTCCAAATATTTTACGCTGGAGAATAAGAGTGCTCTTTACACCTACGATTTCGGGGACAACTGGGAGGTAAAAGTCCGGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 727115-716265 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009524.1 Methanosarcina sp. Kolksee chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 727114 37 100.0 38 ..................................... AGAATAATAGTACCCGGATCACGGGGCACATTCGCACC 727039 37 100.0 35 ..................................... CAAGCATGAACAAATGCACAGCATCCCGTACCTGT 726967 37 100.0 37 ..................................... ATTTCTTTAATTTCGTTTTTGTTTAGTCCGTTTGTTG 726893 37 100.0 35 ..................................... TTTCTCCTCAATTACTCTCACATCATCCGGACAGA 726821 37 100.0 36 ..................................... TGTAATTTGTTCGTGACTCTTGCACACGATCTATTA 726748 37 100.0 36 ..................................... AATCCGGACAGAACTGAACCAGAAAAACGAGACATA 726675 37 100.0 36 ..................................... CTATCATGATGCTTCGGTAGATGCTCTTATTATGAA 726602 37 100.0 34 ..................................... AAGCTGCTAATACCTGTTCAGCTTGTGTGTTCGG 726531 37 100.0 36 ..................................... TAGTACCCTCATGAATTCTGAAAACTGCGCAAGGTT 726458 37 100.0 36 ..................................... TCGGGTTATTTGCACCCATGAACACTAAATTTGTAA 726385 37 100.0 34 ..................................... TTCACACGTTACGTCAGGAAATGGGTACTGGATT 726314 37 100.0 36 ..................................... TCCAGCTTATAATATACAAATAGATAGCCCCTATGC 726241 37 100.0 36 ..................................... TAAATTATAAATTTCGAATATTAGATTTTGAAACAG 726168 37 100.0 35 ..................................... TATTTTGATGAAGGGGGATGAATAATGTCATCCTT 726096 37 100.0 35 ..................................... TAAATGATGTATATAAAAGAATTATACAGGTGTCT 726024 37 100.0 39 ..................................... ATCAAGGCAAAGAAGTTCCTGAAATTAAAGAAAAAACAG 725948 37 100.0 36 ..................................... GACATAAGGCTAAAGAAGAAAGAAAAAGCGCTAATA 725875 37 100.0 34 ..................................... CTGAGGTAAAAGCATGTATAAAGTGTTAATAATT 725804 37 100.0 34 ..................................... AATGTGCGTTCAAAAAGAGAAATTAAATTAGATT 725733 37 100.0 35 ..................................... CTTGACAAGTGATGTCTCCGCTTTCTGTTATGTCG 725661 37 100.0 34 ..................................... TAGGTCAACTGCATCGTATGCTCAGGAATACCTC 725590 37 100.0 38 ..................................... GATGCATGGTGTAGTGATCTAATCCAGTTTTCATAATC 725515 37 100.0 36 ..................................... ACCAATGTAAAAACCCACTTTGGTTGCTCTGAAATT 725442 37 100.0 38 ..................................... ATAGTACGCCTGGCTATTGTTCCCAATGCCGTAATGAT 725367 37 100.0 36 ..................................... TTCTTCTCTTACTTTGTGAGGATCTTGCACTAAATC 725294 37 100.0 35 ..................................... ATCACTTCTATAAACCTATCCATCTCGATCTTATT 725222 37 100.0 38 ..................................... GAAAAGAGTATTACCTTTTCCCCAAGTTATCCCGATAT 725147 37 100.0 36 ..................................... TTTGTTACAAACACATTACTGGATGAATCCACCGCG 725074 37 100.0 35 ..................................... TAAGGACTAAACTTCAAGGGAAATTGAGGGTAAAC 725002 37 100.0 35 ..................................... CTCTATCTCTGTCATTTAATCCGGCATCGACAAAA 724930 37 100.0 35 ..................................... CCAATGCGTCAACGGACCCAGCGGAGCACCTCACA 724858 37 100.0 37 ..................................... TTTATCCCCCCTTTATCTTACAATTCTCCATTTTCTT 724784 37 100.0 37 ..................................... ACGATTTCCACGGAAGCTCTGTTTCAGTTGGTAGTAT 724710 37 100.0 37 ..................................... TAAGGATAATTGGAATTTCAAATAGTCGTAAATTTGA 724636 37 100.0 37 ..................................... ACATCAGATCACCACCAAACCCGCTTTCAATACCTAT 724562 37 100.0 33 ..................................... TTTCTTCCTGGGCAGGAATGGTATAAGAACCAA 724492 37 100.0 36 ..................................... CCCGAAATAAAAGAGGAATGAAAATGTTGGAAGATA 724419 37 100.0 38 ..................................... GTGTCAGTCGTGGCGCAGTTAATATTCCATGACTTCGA 724344 37 100.0 34 ..................................... TGGTGTGCCTCCATCGAGTACAATCCGTCCAATA 724273 37 100.0 33 ..................................... ATTCAGATTGATCCTTCGTGTGTAAACAATATC 724203 37 100.0 37 ..................................... CTAAACAAGGAAAAAATAAAGGAGATGTAAGAAATGG 724129 37 100.0 33 ..................................... TTGATATCCCTTCTAAAGTGGGGATTGGAGATT 724059 37 100.0 35 ..................................... AAACAATCAAGAATAGTGTAATCCGTTCCCCCAAC 723987 37 100.0 35 ..................................... TCAGTTACTTTTGAAACTGAAGAAACTTTAGAGGT 723915 37 100.0 37 ..................................... TCTTTTCAACCATAATATTACCTCAGTTTATTTTTTT 723841 37 100.0 36 ..................................... TATCATTTATCAACACAACCATTACCTCTGAATTTT 723768 37 100.0 40 ..................................... ATTCATTATCAAATGCTAAAAAAATTATAATAATTGGATT 723691 37 100.0 36 ..................................... TCACACTTGGGTTAGTTTTCTAGAGTTTTGTGGACA 723618 37 100.0 36 ..................................... TTAGTATGATTCATAGATCTTACTTTGACTATTATT 723545 37 100.0 35 ..................................... TTTTGACTTAAATGATCTAAAAAGTGTAAATGTTA 723473 37 100.0 34 ..................................... TTGGTTAACTGTATGAGAATAAAGATAATAGAAA 723402 37 100.0 38 ..................................... ATAGTTTCATCTCCTTTTCGTCAATTGTCGAAGTTAGT 723327 37 100.0 37 ..................................... TCATACCAGTTTCCTCCAACACTATCCCATGTAATAC 723253 37 100.0 38 ..................................... TCCCAAAGCTTTTAAGTACTTCAAAGAAATATTGTAAA 723178 37 100.0 38 ..................................... AACCTCTTTGCTCTCTACTACTTCCCAGGACTGACTGA 723103 37 100.0 37 ..................................... TTATCCTTGTTAAATAATCCACAATATGAAGGAGTTG 723029 37 100.0 35 ..................................... AAGATATGGACAACTCAATAAAAAAGGAAAAATGA 722957 37 100.0 38 ..................................... GTCATGCCACGAACTCAAGGTGTAAGTTCCATGGGATA 722882 37 100.0 36 ..................................... TAACTCCGCTTTTTAGGGTTGCGTTTCCAATAACAT 722809 37 100.0 36 ..................................... TTCCGAGAAACAATAAGGATAGAACTTGTTTTTCAT 722736 37 100.0 35 ..................................... GCCTTTTCAAGCTCATTCACAGACATTACCTTATA 722664 37 100.0 36 ..................................... GTCGAATGAATGTTCTACATACCCCATTTGGCAATC 722591 37 100.0 36 ..................................... ATTATAATATAACTCTGAAAATAAAAAAGGAGCTAT 722518 37 100.0 35 ..................................... TTACAAATTCCTTCTGGATTGCCATCCCACATTCT 722446 37 100.0 36 ..................................... CATTCAAATCCAGGATTACAATTACACGCCTTCGAA 722373 37 100.0 35 ..................................... CGATTATACTAATGCTGCGGCTTCCGGTGATATCT 722301 37 100.0 36 ..................................... TTGAGTGTTTTTTGAATCTCCTTTCTTCTAAAAATT 722228 37 100.0 34 ..................................... TTTCGATAGATGGGATGATACGAAAAGCTACCGA 722157 37 100.0 34 ..................................... CTTAGAAGCAAATTCAATCGAGAAAATAGACACT 722086 37 100.0 36 ..................................... TTTGTTGACGAAATCCGGTGGGTGGTTAGCAAATAT 722013 37 100.0 35 ..................................... TATGTTTAAGGATTTCTAAAAAAATAGTTGATTTT 721941 37 100.0 34 ..................................... ATGTTGGTTTATTTGTATAACTTGCATGTATAGC 721870 37 100.0 35 ..................................... TTATTAGCATATGTTTCGGCGTTGGTTACTGAAAA 721798 37 100.0 36 ..................................... TTTTCCATTTCCTAACTCCACAGCATTAAATCTCAA 721725 37 100.0 37 ..................................... TTTAGAGATCCTGAAAGCAACAAAATAGTAAAGATCT 721651 37 100.0 36 ..................................... AAGACTCTAATTCCTGAATAGCTTCCTCTATTACGG 721578 37 100.0 33 ..................................... ATTAACCGTTGTTTTTAGTATTACTTTTTTATT 721508 37 100.0 37 ..................................... TGCTTACGACCGCTTCCAACCGGGTTAAATCTTGCGG 721434 37 100.0 37 ..................................... TACCAAAGAATTAGATTCGGAGAAAGTTTTCCAGATA 721360 37 100.0 35 ..................................... TAGCAGGTTTAACATTGGCCGCAATATACTTTTAT 721288 37 100.0 37 ..................................... ACTCCGTTGAGCCGCGGGACTCCTTTAATGTCTGCAT 721214 37 100.0 36 ..................................... CAGCTCATTACCTCCAAAAAAACAATCTTTCCAAGA 721141 37 100.0 36 ..................................... ATAAAGGCTCTAACCGCTTCTAAGAAAAGGCACTTG 721068 37 100.0 36 ..................................... TATATTTTGGGGGAGTTTGGTCTAGAACTTGTCCCC 720995 37 100.0 37 ..................................... TCTGTTTACTTCCCTCTATATCTTTTTTTGTTCGGTC 720921 37 100.0 38 ..................................... TAAAATCACACTCACAGCCAATACAAGCGGGGGGGGAA 720846 37 100.0 35 ..................................... TTGCAGTAGGGCAGACTGGCAGTTTTCGGGTAATG 720774 37 100.0 36 ..................................... ATTCATACGAATAATCATTTCCGAAAGACTCCTTTT 720701 37 100.0 34 ..................................... AGGTCATGAGCATTCAAAACGTTCTCCCCGTTCA 720630 37 100.0 36 ..................................... TAGCCTGGACCAAATAATGTACGAACCTCTCCATCT 720557 37 100.0 36 ..................................... ATGAATTATATAACAGGGATTAAAATTTTTCTTATT 720484 37 100.0 37 ..................................... TAAATTTGAGCAAATACTAAAAAAATGAGACAAAAAG 720410 37 100.0 35 ..................................... TCCGGCAATGAATTGATAGGACTTAAAATAATTGT 720338 37 100.0 35 ..................................... ACCAAGAAAATGAAAGAAATTTTCTTTGGAGAAAC 720266 37 100.0 36 ..................................... TGAGCCATCGACGGTCTCCGGAAGTAAAACCCCAAA 720193 37 100.0 35 ..................................... ACATTCAAGTCGCTGCCTACCGTTGAAACATGGAA 720121 37 100.0 35 ..................................... CTTAATGGAAAGGCACGTAATACAAACGCGGGTAA 720049 37 100.0 36 ..................................... TATCACGTTGAATTATGCGATATACTATTATGTTGG 719976 37 100.0 35 ..................................... CTGATTTATGGATCTTGTATGGGTTGGTTGTTGCT 719904 37 100.0 38 ..................................... GGCCTCTTATAGTTTGCAGGTGCTACAATCTTTTCATA 719829 37 100.0 37 ..................................... AATCAATTGTGAGGGTATTCTGCTGTTCAGAAACATT 719755 37 100.0 38 ..................................... TACTTTCATCGCATCCTCTCTTATATTCTTATGAAGTT 719680 37 100.0 38 ..................................... CCCTTTGACAGTATGTATGACGCAGGGGAACTTTACAT 719605 37 100.0 37 ..................................... ACAATAATATAAGACTCATTTCGAAATGCGGTTATTC 719531 37 100.0 36 ..................................... TTTCAATGCCCTGAGCTTGATATCCAGTTTCAACCT 719458 37 100.0 37 ..................................... AATGGGTTTAATACACAATCGGAGCAACACACGCGAA 719384 37 100.0 36 ..................................... ATGCTTTACCCCCTACAACTGTCATAGGTGTAGGAA 719311 37 100.0 34 ..................................... GATTTTCTTGTGCTGCTAACCCTGATGAATATGA 719240 37 100.0 35 ..................................... AATATACCGTGTGATCTCCCCCATCTCTTCCTCTT 719168 37 100.0 38 ..................................... CCCGGCTGAATTGAGGCTGGAATCGGTTTCGAGAGGGA 719093 37 100.0 37 ..................................... ACAGTTTTTTCGTGCTTATCCCACTCGGAAAAACTAA 719019 37 100.0 35 ..................................... TCTCTATCTCTTTCTCATATGTTGCACCTACTGAT 718947 37 100.0 37 ..................................... TCAATCGATCCTATATGATCAACTATAAACTCAATTT 718873 37 100.0 35 ..................................... CAGCTCCCAGAACGGGGTTAGCCAACATCAAAACT 718801 37 100.0 37 ..................................... ACTGATAACGTTCAAACTAAAAAAATTAGTCCTTCAC 718727 37 100.0 37 ..................................... TAGATTAAATAGGGAGAGTGTATGATACTAAAAGTCA 718653 37 100.0 36 ..................................... GATGTGGTTCTGTGGTATCATAGATTACCTCATCGT 718580 37 100.0 35 ..................................... TATGTTCTATTGCTCCGGAGGCTCCAATCTTTGAT 718508 37 100.0 35 ..................................... AGTCAAGAGTCAGGAATTCAACTTCTACTAAGTCC 718436 37 100.0 48 ..................................... AAAATGTGTATCCAGTATAGTCCCACGATCCAGACGGATCGTATGATG 718351 37 100.0 37 ..................................... ACTGAGGATTGGGAAATTATAGAAGATTCCCCCGAGG 718277 37 100.0 36 ..................................... AAATCACCTGATGAATCTGGACTCCCATATATATTT 718204 37 100.0 36 ..................................... TTGTTGATCGATGGTCACTCAGTGCAATTATCTACG 718131 37 100.0 39 ..................................... TCAATTAAATTATAAAACGCCGATGAATAATGATACCTA 718055 37 100.0 37 ..................................... AGCCTAGTGCTCTGTGAGACCTTTTGACCGGGGGTAA 717981 37 100.0 36 ..................................... ATAATATGAGATTTAAACCCCTATTTGTTCTTTTTT 717908 37 100.0 34 ..................................... ATTGATTCTTTTTCATGTCTACATCTCCTGATAG 717837 37 100.0 32 ..................................... TTCCTCCTTGCAATTATTACCAATTTGACCAA 717768 37 100.0 35 ..................................... TATGATAAGTGCGTATAGTAGTATTGTAGTATGAG 717696 37 100.0 37 ..................................... GTTCTCGCTGTCTGGGGTCCTCAGACTGACAATTATC 717622 37 100.0 34 ..................................... GATGGTAACTTATCGATACACTTAGCTTGATAAT 717551 37 100.0 37 ..................................... ACATTTATCATTCTAGTTGCCTCCTTGCTACAATACT 717477 37 100.0 37 ..................................... CTTCCTTCGCAGGCTTTCCATTTATCGTTATAAAACG 717403 37 100.0 42 ..................................... AATTAAGCTCCCTCATAATTCTTTCATGCTCCTCAGCAAAAA 717324 37 100.0 35 ..................................... TCATATCAGTGTTAGATTGAACACCTCCTAAATGT 717252 37 100.0 35 ..................................... TTTTGTATGATTGATTACATCAAAAAATCTGGTTG 717180 37 100.0 34 ..................................... AAGATGAAGTCGCTAACTCAATGTCATTTGAGGG 717109 37 100.0 37 ..................................... TAACATCCAGTGTTTTTCAATATACTCCAACGTTTTT 717035 37 100.0 36 ..................................... TATGCTATTTCTTGTAACTCCGATGTAGACAATTGT 716962 37 100.0 37 ..................................... TCCCAATTTGATTTTGGAACATTTGCCAAACCATAGG 716888 37 100.0 35 ..................................... TTAAATAATTTGTCATTTTATTATTCATAATAATC 716816 37 100.0 39 ..................................... TCAAAAATTTGGAACACAAGATAACATACCTTTCAAACC 716740 37 100.0 36 ..................................... TTCAAGATCAAGCGGGACTGCAGGCACTTCGATATT 716667 37 97.3 36 .....T............................... TAATATATATATTTGCATGGATTAACACAGTAATGA 716594 37 97.3 35 .....T............................... TTATAGTTATTATTCCTAGTGCTCCTGCTGTTTCT 716522 37 97.3 34 .....T............................... TCTGGAACTGAGACTGATCAAAACATATTCCAGA 716451 37 100.0 37 ..................................... CACGACCTATCAGAGTCTTTTGAGGTTGTGCACAAAA 716377 37 100.0 39 ..................................... AAGATAAGATAGCCTGTGCTGTTGCAAGAGGGTATGAGA 716301 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================ ================== 149 37 99.9 36 ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC # Left flank : GATAGCGACGTATTCATTGCTTCAAAACAGCACCATATAAAGGGAATAGTTGATGAGGTGCTTTTTCTTGAAGACGGGACTGCTGCTCCTCTTGAGTACAAATTTGCCGAGTATAAAGACAAGATTTTTAAAACCTATAAGTTTCAATTGGTTTTACAGGCTCTTTTGATCCGAGAAAATTACAGTATTGAAGTAAACCGTGCTTATATCTGTTTTACTCGAAGCAATAGCCTGGTTAAAGAAATGGAAATTACTACTTCTGATTTCAAAAAAGCTGAGAAAATTATTGAGGAAATACTCGATATCGTTCAAAAAGGCTTATATCCCAAAACCACTATCTCTTCTAGAAAATGCGTAGATTGCTGTTACAGGAATATCTGCGTATGAAGAGATTTTTCTTGTATTTATAAAGGGTTTGATAATTTTCCAGCAAGAATTTTAGCCCCAAAAAAGGGCTCATTTCAGGGCTTTTCTAGCCAAATAACGGAAATTTTTGCCCT # Right flank : AAATGAACCATACTTACAAAGAATACTAGCAAACTATTTTTAGTAAATTCTATTAGAGTCGATCCTATGTTAAGTTAGATATGTTAATATGCTGTTATAACATATTATAATATATGTCTACCATAGCCATTGACCCAGATGTAAAGGAATCACTTAAAGAATTTAAGATCACAGAAAACGAGTCTTATAATTCCATTATCAAACGGCTCATTGTTAAAGTTAAAGAAACTGCAGAGTATAAACCAATGTTCCCAAAAGAAGAGAACACTGAACGAAGAGAATCACATGTCAAAGATTTCGATGCATGGTTGGATAGGAAACTCATAGAAGACAAAGAGATCTTAGACGCACTCGGAAGAAAGTGATATGTTGATTAGCTTAATTGATGTCTTAAAAATTCATCAACGAGTGATTGACTATGACAAAGAAGAGAATCCTGACGATTATACACCTGCAATTAGATCTCTTGCTACATTAGAGTTAATGTTTGAATATATGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 3 2353261-2355301 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009524.1 Methanosarcina sp. Kolksee chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2353261 29 100.0 32 ............................. GAGGACAGCACCTGTCACTTCTATAAATGTAA 2353322 29 100.0 32 ............................. GCTCGATCAATTGCGCGACGGAGACCGGACTA 2353383 29 100.0 32 ............................. ACCAGATGGTAAAGGTGGATGGGAGGCTTAAA 2353444 29 100.0 32 ............................. AAGGGTACTGTATGGATATTGATACTGGAAAA 2353505 29 100.0 32 ............................. AAAAAACTAAAGTGATTTGGTCAAGCGATAAA 2353566 29 100.0 32 ............................. GAGTGCTTCTTAGTAAGTATTATGGAGCAATT 2353627 29 100.0 32 ............................. TAAACCCACACGTGAAGGGGTGGAAAGCAGGA 2353688 29 100.0 32 ............................. GTATAAAGGCAAGTATGAGAATTCCGTTCTTT 2353749 29 100.0 32 ............................. ACGTATTGAGCCAGGGTAATTCCCCGGAATTC 2353810 29 100.0 32 ............................. TACTCCACCACTGAAATCGTGGGAGCATATGA 2353871 29 100.0 32 ............................. ATGCTCCGGCGGCAGTTGCACAATTTGATCCA 2353932 29 100.0 32 ............................. CTTTCACCGTCTAGGAAACCATCTGCGTCTCC 2353993 29 100.0 32 ............................. CTTTAACATTATAGAATCCCACTTGTTTTCCT 2354054 29 100.0 32 ............................. GTACTCGTCGCCATTTGCGAGACAGTAAGATA 2354115 29 100.0 32 ............................. TAGCCCAGTTAGTACTTCCTCCGGAAATTATA 2354176 29 100.0 32 ............................. TAGAGAATATAAAAGAGGCTTTAAAAGAGTCT 2354237 29 100.0 32 ............................. ATCCCGGCGTTGTCGCTGTAGATCCAATTGCC 2354298 29 100.0 32 ............................. GCGTGTTATATTGGAATCGGGAGTGTTTAACG 2354359 29 96.6 32 .C........................... GAAGTGGACCATATGTGGCTATTAGATCAGTA 2354420 29 100.0 32 ............................. CTAGAAGTTTGGAATTATTCCCTGAAGCAATA 2354481 29 100.0 32 ............................. GTAGAAATCTATGGTTTTGAGATCGACGGGAA 2354542 29 100.0 31 ............................. TATACGAGGTTCTAAATGACATCTAAACGAC 2354602 29 100.0 32 ............................. TTAAAAGAATATCCCAATAGTCGCCGGGTTGT 2354663 29 100.0 32 ............................. TTAAAAGAATATCCCAATAGTCGCCGGGTTGT 2354724 29 100.0 32 ............................. TATACACAACAAACGCTATTCTGTATAAGTTA 2354785 29 100.0 32 ............................. CTGAAAATAATTACTCTACAGGGAACCTTGCT 2354846 29 100.0 32 ............................. ACGTAACTGTAATCGTTCCTCAGGGAAAACTC 2354907 29 100.0 32 ............................. GTGAGAAACTACAGCAGCACCTATCTTAGCAT 2354968 29 100.0 32 ............................. TGATACGTCATCCTCAAACGCTGGTTTTGAAT 2355029 29 100.0 32 ............................. GCTGCTTCTATTTTCACATCCCAACCGTTAGC 2355090 29 100.0 32 ............................. ATGAGCGAGTGCAATAGGACAGCATGAACAAT 2355151 29 100.0 32 ............................. ATGTGCTTATAACTGAAAAATTAATAGAGGGT 2355212 29 100.0 32 ............................. ATTTGGCTTGTAATTGTTGTGGATGTGATGAG 2355273 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 34 29 99.9 32 GAGTTCCCCACACGCGTGGGGATGAACCG # Left flank : TGCCGGAGATCTCCCTATTCCTGAAGAGCCTCCTGAATCCCTTCCTCCTGCAATTCCAAATGAAAGGGGACTTAATGATGTTGGTCATCGTCCTTGAAAACACAACACCTCGGTTAAGAGGAAGATTGACTCTCTGGCTTCTGGAAATTAGAGCTGGAGTATATGTAGGAGAGTATTCGATCAAGGTAAGGGACATGATATGGGAGAATGTAGAAGCCGAATTCAATGATGGGAACATTGAAGGAAGCGCAATTATGATCTGGTCCGCAAGAAATGAAATTGGATTTGATTTCAAAATACTCGGAGAAAACCGCAGAATTCCAAGAGAAATGGATGGAATAAAGTTAATATCCTTCATGCCCGAAACTAAAGTAGAAGAGTAAACTAACCGGAGACGTTATGCTTTTTAAATACTTCATTTTTTATATTAAATATATCATAAAGTATGTTTTATATGTTGACGGAATATTTTTTCCGATTCATACTATAAAAGACAAACA # Right flank : GTTTTAGCTTAAAATAGTAGTATAAAACTAAAAATGAAATATATCTATTAAAAAAGATAAACTTTAATCTTATAGTAAAAAAGACTACAAATCAATCTAAAGTTTGCAGAGCTTTCGTTATACTGCCACAAAAGAAACAATGGCCTTATTTTATAATTTTCCTTCTTCAATAGCTTGTAATCTCTTTTGGAATTCCTCTGCTATCATTAATTTCCCTTCGATTAATTCTACAGTTCCGACGCTCTAAAATAACAGCATGCCCTTTCGGGTGTGCCTCTCGCCAGGCCTCCGGCGATTCAGGATCCCAATAAGGAATATCTTCCTCAGGGTAATAGATAAATACCTTAATAGCCCTGCTACCTTCAAGATCAAAACTCTTTTCTAAGTCTTCAAGACGTTTTTTAAAACATGCAGGAAAAAACATTTAAACCCATACCTCCATCCACTTCAATTCTTTCAATTGAATCCATTATAGCGCTACGTGTCATCACAAAAACGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCACACGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCACAAGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [75.0-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 2900020-2902437 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009524.1 Methanosarcina sp. Kolksee chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2900020 32 100.0 34 ................................ AATATCGTGCAGGGTTTGCCCTGGGGAATATCAC 2900086 32 100.0 35 ................................ GTCTTCACTAGAAATATATGGAGGGATAGGATCGT 2900153 32 100.0 34 ................................ CAGTATGCAATAGGCAATGCAGGCCACTAGTTTG 2900219 32 100.0 35 ................................ TGGTACGAGGCTAAAAAGAACGCAAATTGGAAATG 2900286 32 100.0 34 ................................ TAGTACTACCTGTATGTATTAGGGGTTGCGCCAA 2900352 32 100.0 34 ................................ TCCAAGAAGTTAGGAACGTTTTGAATCAGAAATG 2900418 32 100.0 32 ................................ CAAGTGTTCCTACTGTTAACCTGTTAGATAAT 2900482 32 100.0 37 ................................ AGAGAGTAGATGTTAATGGTAATTCGTTTACCCCGCC 2900551 32 100.0 35 ................................ TAGTTAGTTGAAGTCCCCTAAAGTCTTCACACGCT 2900618 32 100.0 36 ................................ TAGCAGCCAAGCGGGGCGAACCCGTGTATATCGTGC 2900686 32 100.0 33 ................................ AATTTTAACGGGAGCGTCTAAGGACATGGCATG 2900751 32 100.0 34 ................................ CAAATCACAGTCATGTTTTTTCATAACTTTAAAC 2900817 32 100.0 34 ................................ CGACGTAAACATTGCCAGACTTATGGACATGTCT 2900883 32 100.0 32 ................................ TCCCCATATGTTGTATGCTTTTTGGCCGGCTT 2900947 32 100.0 35 ................................ CTGGATAAAGAGTAATAGTACTGATATCCCCATAT 2901014 32 100.0 34 ................................ CAACACACTTTATACACAGTTTATCGACGTGTAT 2901080 32 100.0 33 ................................ CTTCGAGCGATACCCCCCCATAAATATTCGATA 2901145 32 100.0 34 ................................ TAAAAAAACTGTTTACCTGGTACTCAATATCTTT 2901211 32 100.0 37 ................................ TAAATCATCATATGCCATTTTATCACCTAATGTTATA 2901280 32 100.0 35 ................................ TTAGGAAATCAACTTTTAAAAACGCAATCAGCTTT 2901347 32 100.0 34 ................................ TGAATAAATGAAACTTACTACAGGAGAAATACTT 2901413 32 100.0 36 ................................ GTCGAGAACAACTTTTTCGTGCTCAATATACTCAAA 2901481 32 100.0 34 ................................ CTCTTCGCATTCTTCACATGTGCGATATTCCCCG 2901547 32 100.0 35 ................................ TTTTTTATCTGGGGGTAGTGCAGCGTATATGTCAG 2901614 32 100.0 34 ................................ TCAGAATCGAATGGCACTGTAGATCGAACTTACC 2901680 32 100.0 36 ................................ CTTACTGTTTGTCCGTCCACATCAATCCATGAAATG 2901748 32 100.0 35 ................................ AATTATCGTAACCCTTGTTTCAGATTTTCCGATTT 2901815 32 100.0 33 ................................ CTCTTGTTGTCGGGTCTTTTGTTATGTATGGTG 2901880 32 100.0 34 ................................ TTAGACAATTATCAGGCCAACGTTCAAACAAAAC 2901946 32 100.0 34 ................................ AAGGCGGTTCGCTTGTGTTTCTGAGAGAATTTTA 2902012 32 100.0 33 ................................ TTTTCATTATCGTTGTATAGGGAAAATGGTATT 2902077 32 100.0 34 ................................ CTACAAACTGGATTGCAGATAAAACCGTAGTGGT 2902143 32 100.0 33 ................................ TAGGCGGCGCACAGGATGAAGACTACTGGAAAC 2902208 32 100.0 34 ................................ ATTTCAGAAGAAACTAGATGGTTATCAACAAATA 2902274 32 100.0 35 ................................ ATGAGAGAAATAGCCCATTTGGACATCAGTTTCCA 2902341 32 100.0 33 ................................ ACTATACAAGTTGGATTCGAGAACATGCTCCAA 2902406 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 37 32 100.0 34 GTCGCACCCTTCGCGGGTGTGTGGATTGAAAT # Left flank : ATATTGATGGATATCCACCATTTTTTATGAATTGAGGTGTTTTTAGTGATGGTACTGGTAACTTATGATGTGAATACAGAATCAGAAGGTGGAAAAAGCAGGCTAAGAAAAGTGGCAAAAGAATGCGAAAATTATGGACAGAGGGTTCAGAACTCTGTATTTGAGTGCCTTGTAGATCCTGCTCAGTTTGCACAGCTAAAACATTCATTATGTGATATAATGGATGAGGAGCGAGATAGCCTTAGATTTTATTACTTGGGCAAAAATTGGAAAAATCGAGTAGAGCATTTTGGTGCAAAAAAAGGATACGATCCAGAAGGTTTATTAATTACATAATCTCTGCGAACCTGTAGTGAACATTGATTTACTGGAAGGTTCGCAGGAAAAATCCATTCATAATATTTATTTTTTGTGATAGTTTATAAATAAATTCAATAACTTAAATATTTCCAAAAAATTAAAAAGCCAACTGGCTAATGTATAGTTTGAATAAATTTACA # Right flank : TCCTTTGAAAAAGAAAACGAGGTACTAAGAGCTTATCCGAAAAGTCAGCAACGCATGTTGAAAAGTTACAATGGGTCTAAATATCCGGGCATCCGTTCTGGTTTTGCATATTGCATATTGTAAAAGTTATAGTAGATAACCACTTTTCGGATAGGCTCTAAATAGTAGGGCGCACAAACTTTTCTTACAAGTATCAAAAGCATCTCCATGACAAATAAAAGTCGCAAAGAAAATGACACTCATTCGTGAATATTTTCAAAGAACTTTCTTATATTGAAAAGGTCCTCGGTTTTTCCCAAAATAACGCAGGCGTCTTTTGCCTGGAGGAGGGAGTTTCCATCAGGAACATAGATCATTTTCGAATACCTACGAATAGAAAGGACTGTCACTCCATATTTTTTCCTTAATTCCAGATCTGCCAGGGTTTTTCCATCGAAACTGGAGCCTTCTCCTACTTTAACCACCTGAATATCGACTCCTGGAAGCCCATTCTTTAAACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCGCGGGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //