Array 1 29272-29465 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAANBP010000016.1 Staphylococcus aureus strain 30500174 Contig_20_75.2943_pilon, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence         	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	========================	==================================	==================
     29272	    24	  91.7	    34	..................T..C..	AAAGAAATTCTACAGGCAATGCGAGTTGGGGTGT	
     29330	    24	  95.8	    31	...........A............	TTCCCAATTTCTACAGACAATGCAAGTTGGC   	
     29385	    24	 100.0	    32	........................	TTCCCAATTTCTACAGACAATGCAAGTTGGCG  	A [29387]
     29442	    24	 100.0	     0	........................	|                                 	
==========	======	======	======	========================	==================================	==================
         4	    24	  96.9	    33	GGGCCCCAACACAGAGAAATTGGA	                                  	       

# Left flank :   ACTTTTGACTTTATCCACTACTGCAACTAATGAATTAAATAGTTCCTTACCTCTTAAATCAATTGCAATTGCCACTTTTCTTAAGGATGGATTTCCTTGTTCCATCAACTCTACAAATTTAGGCAATAACACTGGTGGTAGATTATCTACACAAAAATATCCCATGTCTTCTAAGCATTGAATAACCAAAGATTTACCTGCGCCAGATAAACCTGTGACAACTAATAGTTCACTTTTACTTTTTTCTTTTTCATTATTATCCATTATTTTTTCACCGCCAAAACGAATTTCATGATGTTAATTTAAATGTTCTATGACAAAATTAAGCAACGATGTTTTATATTTATTTTTAACTATGTCTAGATTAAATTTCTAAAAATATACATCATTTAAAAGGAGCTTAGGACATAAATCAATGTCCTAGGGTCTATAATATTATATTGCTAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCTTTTTTCAACTCTAGTCAG
# Right flank :  ATTCCCAATTTCTACAGACAATGCAAGTTGGGGGCGGGGCCCCAACACAAAAGCTGGCGGAAAGTCAGCTTACATTAATGTGCAAGTTGGGGTGGGACAACGAAATAAATTTTGTAAAAATATCATTTCTGTCCCACTCCCATAAAGTTATAAGTTTAATATAACATATAAAAAAACTAGAACTCATTGAAACGCACAAATGATACGTACTAAGTTCTAGTTTTCTATATAATTTGCTTTAATTTAAAAGTAAGACATTATTTTAACAATGTGATGACACTATTAAAATAAATATCCAAATAATTTACAGCTCAACATCTTAATTCGACTTCGAATTAAGCTTGATCGTTTAAATGTTCAATATATTCCGCTGCACTTTGCGCTGCAATACTACCATCGCCAGTAGCAGTGACAATTTGGCGTAAACCTTTGTCGCGAACATCTCCTGCTGCAAAAATACCCGGTACTGATGTTGTCATATCATCTTTTGTCACAATATA

# Questionable array : NO	 Score: 2.51
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGGCCCCAACACAGAGAAATTGGA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [9,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [3-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [61.7-45.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.64,0.41   Confidence: LOW] 

# Array family : NA
//