Array 1 589347-592545 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHRW01000002.1 Prevotella nigrescens strain KCOM 1102 KB5_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 589347 47 100.0 30 ............................................... TCTATCGTCATCTTTATGCCACTGTCGGTA 589424 47 100.0 30 ............................................... ATAGAGTAGCTGCTTGGTCAGCATCTATGT 589501 47 100.0 29 ............................................... GAAATATCAAAGTATGCAGAATATAAACT 589577 47 100.0 30 ............................................... CTACGTGGCAAGCTATAAAAAATAGTAATT 589654 47 100.0 29 ............................................... TCGTTTTGCAAGGTTCAATCTCTCCCTCG 589730 47 100.0 30 ............................................... ACGGATAAAGGTTTTAAGCTTGAAGATAAA 589807 47 100.0 30 ............................................... ACAGCAAGGAATATGGAACCTCAAAGGATA 589884 47 100.0 30 ............................................... TATTTCGGGTTGCTTACCCAAATTCCCGAT 589961 47 100.0 30 ............................................... TATTGGCAGTATGTTACTGCGGGCGATGAG 590038 47 100.0 30 ............................................... TAACACCAACATAGTCCTCAAAGGTTTTAC 590115 47 100.0 30 ............................................... AAAAGTGTCGTCAGTTTAGATTGGCAGTTG 590192 47 100.0 30 ............................................... TGACGCCAAATTAGGAAGTTATGAGAAAGC 590269 47 100.0 30 ............................................... TGACGCCAAATTAGGAAGTTATGAGAAAGC 590346 47 100.0 30 ............................................... TGACGCCAAATTAGGAAGTTATGAGAAAGC 590423 47 100.0 30 ............................................... GGTTTACGTCGTATTACGAAAAAGATTATG 590500 47 100.0 30 ............................................... GCGGTTGGCAGCCACCATCTCCATATTGGG 590577 47 100.0 30 ............................................... ACACTTTGGGAAGTATCGATATTCAAGAGG 590654 47 100.0 30 ............................................... ATACGAGACAAAGAGCGATACTCCCGACAC 590731 47 100.0 30 ............................................... TGAAAAATGTCGTGAGTTTAGATTGGAAGT 590808 47 100.0 31 ............................................... AATATGCTACTAAATGGTGTAGACCCGAGTA 590886 47 100.0 30 ............................................... ACAGGGATAATAGCAGAAAAAGTGCTATAT 590963 47 100.0 30 ............................................... TATGACGGTAAAGTGGCAGACGCAAGGAGA 591040 47 100.0 30 ............................................... CCGCCGTGCGTGGTATTGCTGGCGTGTGGT 591117 47 100.0 29 ............................................... GTGGTATCGCAAATGATGTTGGCTTTATT 591193 47 100.0 30 ............................................... AAAGACGTTGGAAGAAACGAGAAAAGTACA 591270 47 100.0 30 ............................................... GTGCCATATCGTGCTCTTTGGCAGCATTCG 591347 47 100.0 29 ............................................... GCAATCTCTAAAACAACATTTGTGTCCTT 591423 47 100.0 30 ............................................... AATGAAGAGTTGCGCAAACTTCGTAATGAT 591500 47 100.0 30 ............................................... TAATGGCAGTAGCTCCGTCCCATTCCTTTT 591577 47 100.0 29 ............................................... ATCAGTTACGCAGCAAGGTCAATTAATAG 591653 47 100.0 30 ............................................... AAAATTTTGCTATGCAAATGGCAGAATTAC 591730 47 100.0 30 ............................................... ACATCAGCAATTATAATATAAATGATTATA 591807 47 100.0 30 ............................................... ATCGGCATCGATGAACTTTTCATTTATGAA 591884 47 100.0 30 ............................................... AACGATACTTTGGCTAATGCAATGAAACTT 591961 47 100.0 30 ............................................... TGGGGCAATGTTACAGAGAGAGAAAGCCAA 592038 47 100.0 30 ............................................... ATTTCCACGTCCGTGTAGGCGATAGGCTCG 592115 47 100.0 30 ............................................... ACAATTGGTTCGCTCGCATTTATCCTATTT 592192 47 100.0 30 ............................................... AAGATGCACCGAAGCTGTCGCCGATCGATT 592269 47 100.0 30 ............................................... GAAGACCAAACCACATTCCAGTGGTCAAGG 592346 47 100.0 30 ............................................... TCATAATTTCTATATTTTAATTTTGATATT 592423 47 100.0 29 ............................................... AAAGACCACACTTCCGTCCTTAACGATTG 592499 47 93.6 0 .....................G.........C...A........... | ========== ====== ====== ====== =============================================== =============================== ================== 42 47 99.8 30 GTTGTAATTGACACCACAAAGATACAACTTTTTAAGCAAATCACAAC # Left flank : AACGATGTCTCCATATCATACGCTATTATTTTCTTATGTTAGATAGTTATCGTTTCAACGAATATCGTGTCATGTGGATTCTCGTGTTTTTCGACTTACCAACTGAGACTAAGAAAGATAAAAAGGCTTATACTAACTTTCGTCAGTTCTTAGTGAAAGACGGCTTTACTATGTTTCAGTTCTCTATCTATGTGCGTCATTGTGCGAGTATGGAAAATGCCGAAGTCCACATGAAACGTATTCGTACCCACCTTCCTCGTCATGGAGATGTGGGTATATTGTATATTACCGATAAGCAATTTGCCAATATTCAATTATTTTCTTGTGAGAAACCTAAGCCACCCAATGCACCCGGACAACAATTAGAACTATTCTAAGTCTTGTCTATATAGAAGTAAAAATCCCACTCTTACCGAGTGGGATTTCCTTTTGTGGTCTCATTTTTATTTTCTTTTAATAACTATACATATATCTGATTATCAAGTATTTATTAATAATCA # Right flank : CGAATGAGACTGCCTGTTATCATACTTGCTATTTATATTGCAAATATGACACCTTAATAAATTGAAGTGAGTATTAAGACACGACAAATTGTCTCCTACTGCTATGATATGGGTAGGAGGCGATGTCTAAAAGCTATGACTTATTTGCCTAACTCGTATTTTCCTTCTATCATCTGACCAACTCGGTTGCCTAAAATGTCTTCGGAAGTATAGAACTCAATAAAAGTTTTCTTATTTAGGTCTACCACCTGACTAGATGTAACACCATAGTCTCCTATCCAGCTAATAAAGAACTTTCCATTGTCTATCTTTTTCATTTTCATTGCTTTAGTTTGTTCGTCAATGCTATCGTTTTCGTCTATAGATTTCCAATGAATGGTGCTGTCGTTTAGATACTTCACATTGGCTACCATGCCCGGATAGGTTAGGGTAGCTTTCTTTCCTGTCAACGATATATCTTTGTTGTTGTCCTTACAATGGCAAGCCGATAATACAAGAGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAATTGACACCACAAAGATACAACTTTTTAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //