Array 1 82731-79221 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFAW010000005.1 Kocuria sp. KRD140 Scaffold_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 82730 28 100.0 33 ............................ CTTGGCCTTGAGAACGTCGAGGGGGGAGCCGCC 82669 28 100.0 33 ............................ GGCAGTCGAGGGGTCTTCGGAGTTCAGGCCGAT 82608 28 100.0 33 ............................ GCGCACATCATATGTCTCCGGCGCGGTCCAATC 82547 28 100.0 33 ............................ CGCCTACAACTCTCACCCGTACCCGGTGATGGT 82486 28 100.0 33 ............................ GACGTTGTACTCCAACTGGTACTGCTGCACAAT 82425 28 100.0 33 ............................ CCGTGCGCAGCGTCGCGCCGGGCAGTCCGACAT 82364 28 100.0 33 ............................ CCACGTCAGCCTGCTGGGTGTCCGCGATACGCC 82303 28 100.0 33 ............................ CGGGGTCACCTACCGTGAGCCGACACATGGTGC 82242 28 100.0 33 ............................ CGTTGAAGAGGCGGTCAGTCGTGCGCTGGCGCG 82181 28 100.0 33 ............................ CCTTGATGCGCTCAACAAGCAGGTGTCTGGCGC 82120 28 100.0 33 ............................ GCGAACCCGGGGCACAACCCCGCACGGATGATC 82059 28 100.0 33 ............................ CCTCCACCTGGTCCACATTCGAGTAGGGAAGGT 81998 28 100.0 33 ............................ CAGCATCGACCCCGGCTACACAGCGACGGTGGA 81937 28 100.0 33 ............................ CCAGCAGGTGGATGACAACGCGCTGCTCGCCGC 81876 28 100.0 33 ............................ CTGGTACATGCTAACCGACGTTGACCTTTACCG 81815 28 100.0 33 ............................ CCCTGGTGCCGGTGTGAAGCCGATCAGCGCCGG 81754 28 100.0 33 ............................ TGATTGACGCTGCGGGGTACGACAGGAACTGGT 81693 28 100.0 33 ............................ CTTTCGCAGGCCCTTACCTGACGGGAAGGTGAC 81632 28 100.0 33 ............................ TTTCAAGGTCAGGGACCTCTCCGACCTCGGGAA 81571 28 100.0 33 ............................ CTCCACCGGGTACGTGAACCAGAACACGTTCAT 81510 28 100.0 33 ............................ ACCCAGATCTGCACCCGGTCCCCACGCTGAGGG 81449 28 100.0 33 ............................ CCAATTCCACGCAGGCCCAAATACCGACTTGAT 81388 28 100.0 33 ............................ CGCCTCACCGCCCTGCGAGATGGAGGACAAGAA 81327 28 100.0 33 ............................ CTGTCGGTGACGCGCTAGAGAGAGCCGGCCTGC 81266 28 100.0 33 ............................ GTAGATCCCCGGGTCAAGGTGCAGCTGCTCGCA 81205 28 100.0 33 ............................ CAGGTCGTATGGACCGTGGGGATGACGTGGTGG 81144 28 100.0 33 ............................ CCGAAGAGGGCAGCGGTGGAACCCCTGAAACCG 81083 28 100.0 33 ............................ CACGGTGTTGAGCTTGTTCTGGAAGCCCTCAAC 81022 28 100.0 33 ............................ CCCCTGGTAGTGGGCCGGGTTGATGGGGTCACT 80961 28 100.0 33 ............................ TCACCGGGCATTGCCCGCCGGATCGTGGTGACG 80900 28 100.0 33 ............................ GCCGGTTGAAATCTCGTTGCGTTTGCGGTGCCC 80839 28 100.0 33 ............................ CCGGACCTTCTTCCCGGTCTCGGCGATCTTCCG 80778 28 100.0 33 ............................ CTGCCGGTAGGTTTCCGCGGCCATCGCGGGCAT 80717 28 100.0 33 ............................ CAACGCGGCCTGCACATAGTGGGCGGCACCGTT 80656 28 100.0 33 ............................ CAGAAGCCGCGGGCGGCTCGCAGCAGGACGCAA 80595 28 100.0 33 ............................ CACCCGGTCACGGATGAAGCCCCAAGCGGCCGA 80534 28 100.0 34 ............................ CCCGCAGGACCCCACGAGGGTATGGGTGACGATC 80472 28 100.0 33 ............................ GGATCGTCGTCAGCGGTGCGAGGGTACAGGACC 80411 28 100.0 33 ............................ TCGCATGACCATCACGGCCAGTTGATCCAGGGA 80350 28 100.0 33 ............................ CACCAACACCACCGCGATCCCGAAAGTGAGGAA 80289 28 100.0 33 ............................ CAAGTTCCACCCCGGCGCGATGGCTCAGTCCGG 80228 28 100.0 33 ............................ CGGCACCACGTGGACGGATTGGGAGAACCTGAA 80167 28 100.0 34 ............................ CCACCGGAAACCTTATCCGGTGTTGCGACGAAAG 80105 28 100.0 33 ............................ TTCAGGGTGCCCGCACCAGGGGCGGACACAGGG 80044 28 100.0 33 ............................ GCGTGGAACCCGTCGAGCACTTCCCGTACGGTG 79983 28 100.0 33 ............................ GCGTGGAACCCGTCGAGCACTTCCCGTACGGTG 79922 28 100.0 33 ............................ CGCGCAGGGCCTCATGCAGATGGTGCCTTCGAC 79861 28 100.0 33 ............................ GTTCCCGGACGTGTCAGCGAAACCCCACGGCCC 79800 28 100.0 33 ............................ GGCTGCCCTGGTGGTCAAGTCGTTGGCTACGGG 79739 28 100.0 33 ............................ CTGGTGGACACGGCGAAGGGGTCCATCGAGTTT 79678 28 100.0 33 ............................ CGCCATGCCGCCCACGACTGTGGCACGGACCTG 79617 28 100.0 33 ............................ CAACACCATTACGATTCAGCCGTCCCGGTACAA 79556 28 100.0 33 ............................ CTGCAGCCAGGGGCCGCGGGCCTTGCGCATGGT 79495 28 100.0 33 ............................ GACTCGCTACGCCCTCGAGGCGGCAGGCCACGA 79434 28 100.0 35 ............................ CAGCCCCCCCTAATCGCGCTCCATGTTTGCGATAC 79371 28 100.0 33 ............................ CCCTGGTGACGGGGTGACCAGGTACTCGGCGTC 79310 28 100.0 33 ............................ CCACCGGACGAGAAGCCCTTCGGGAGCGCCACG 79249 28 89.3 0 .......................AT..A | G [79227] ========== ====== ====== ====== ============================ =================================== ================== 58 28 99.8 33 GTGCTCCCCGCGCATGCGGGGATGAGCC # Left flank : CATTCTCTACGAGGACGCCATGTCCATCTGGTCGGGACGATCGGATTCGACGCTCGCCTCGGGACAGAACCATGACAGGGGCCAAACATGATGGTTCTGGTGCTCTCTGCCTGTCCCGTGGGGCTCCGAGGCGATCTGACCAAGTGGTTGTACGAGGTTTCGGCAGGCGTGTTCGTGGGAAAAGTCAGTTCCCGAATACGTAAACACCTGTGGGACAGGGTGCTCGAGACCTCGGGCTCAGGGCGGGCGATCCTCATCTGGAGCTCCAAGGGAGAACAGGGCTTGAAGTTCGAGGTCAAGGACCACCACTGGGACCCCGTGGACCTCGACGGCCTGACCCTGATGAAGCGGCGTTCCCGTGCACAGAAAACCCAGTCTCCGGAGCTGAAACGAGGGTGGAGTAAGGCCGGTGCGCAACGGCATCTGGGACGTCGGCGGTGAAAGCGCCGAAATCGATGCAAATGATCGTAGAGTGTCGATATAACCCCAGGTGAGGAAGT # Right flank : AATCCCCTAACTACTTCCGGCCCGCACCCGGAAGGGGACAGCCAGACCCTGGGTCATAAGGAGTGTGGGCGCAGTGGGCTCCTTCGCGAACTCGTCGTAGAGGAACGCCTGCGTCATGTACCGCTCTCCGTCCTCGTAGTAGCGAGTACCCAGGCACAGGGGCGGGCCGTTACGTAGCCCGCGCAGTCGCGGCGCTTCTCCCAACCCTGCTGGGCGGGCTCTCACAGCACCTCGATCTCGGCGTGGGCCGCCACGTCCGACCTGGGACCCACCCCGGGGCCGAAGCGCCCCCGGACCTCGAGGCGCCGACACCGCACGAACCCCAGCGGCGACGTCGTACCCACCCCGGGCACGCAAACTATCCCGGAGACCCCGGCGCTAATCATCGCACCATCTCGCCAGACACAACTACCGCCCCACCGACCCCGGCTCGTCCCGCGGGACGGCGAGTGTCGCGGCGGCCATGAGTAGGGCGGTACCCGCTGCCGCCACAAAGACCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //