Array 1 183750-184619 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHUM010000001.1 Enterobacter roggenkampii strain Survcare079 NODE_1_length_443232_cov_15.9748, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 183750 28 100.0 32 ............................ GACCGCATGTCGTAAAACAGTTTCAGTGTTTC 183810 28 100.0 32 ............................ AAACGATAGCGTCACATGTTTTTTGCGTCAAC 183870 28 100.0 32 ............................ TGGACGCGTCGAATATCAGAGAACGGCAGGAC 183930 28 100.0 32 ............................ TGCAGGGATTGCCTTCAGTGTCGCCAGCGCAA 183990 28 100.0 33 ............................ ATCAGCAATGGATGGGAACGCATCGAAGCAATC 184051 28 100.0 32 ............................ CCTCTCGCGTTCGTGAGAAGTTCGAACATGAT 184111 28 100.0 32 ............................ TTGTGCCAGTTACGGAAAGCGGAGCAGAACAG 184171 28 100.0 32 ............................ ACCAGCAGGCAGGCATCACCGGCGTGCCAAAA 184231 28 100.0 32 ............................ GCAGCCAATACCAGCGGTAAAACGCTGCTCGG 184291 28 100.0 32 ............................ TCTGCCGCGTCTGTTTTCCTCGCCTCACGCGG 184351 28 100.0 32 ............................ GTCGGCGGCAGCATAGCTGACAGTAGTTTCCG 184411 28 96.4 32 A........................... TAATTATGGCGCTATTACGCTGAGTCATAACG 184471 28 100.0 33 ............................ CGCGCGGACGGCTCCACGGTAAAACACGTATCA 184532 28 100.0 32 ............................ GGGTGATTACATCTGCGGTGAATGCTGCGTTG 184592 28 92.9 0 ............G..........T.... | ========== ====== ====== ====== ============================ ================================= ================== 15 28 99.3 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACTGCGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACCTTTTGATTTATATAATGCGAATTTACGAACCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTTTAACAATAAGATGGCGCAGTTTCCTTTCA # Right flank : AGCCCCTCTGGGCTTTAATGCCGTGGAAATGGCGTTACTGTCCCACAGACAGTACAAGTAAACCCATCCCTCACAAACATTCACCTCGTCTATTTAAAAACAAAATACCATCATCCACACGCTTTCCCTTTTCAGATTAAATAAAAATCCCATTCAGGGGATAATTATATTTTCGTGGATATATTATTAGTGAAAATAATCCTTTTAAAAAAGGATGTATTTTTTGTTTAGTCATCACCGAAATTTCCATTCATTTGATATCTATCAAATTTGCATTTGTCTTATGTCCGATAACATACCCGCATTCAACACCTTGAAATTAAAGCCGTTGCCATGCCTGCAAATAGCATCACTCCTACCGATTTAAAAACCATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGCGGGCGCGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 194173-194621 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHUM010000001.1 Enterobacter roggenkampii strain Survcare079 NODE_1_length_443232_cov_15.9748, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 194173 28 100.0 32 ............................ GCTAATTGGCTCCTTGGCGGGCGGCAGGGTAT 194233 28 100.0 32 ............................ CGTCAGCTTTCCGGCGGAGAGCTGCGCCGTCT 194293 28 100.0 32 ............................ GTGTTCTTGAAGTTGATGAAAATGGCGCAGTT 194353 28 100.0 32 ............................ CAGCGGTTTTCGCATAATAACCGCAGGGTCGA 194413 28 96.4 33 ....A....................... GCATGAATCGCACTTCCAATGTGCGCCGATTTA 194474 28 92.9 32 ....A.................G..... AGTATCCACCGGCGACTTTACTGACGGCATCG 194534 28 85.7 31 ....A......C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [194559] 194594 28 67.9 0 ....A...T..A....AT...CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 8 28 92.9 32 GTGCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : AAACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTAACCTCCTGAGTGATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGGGTGGGTGGAATGGGTGTTTTTGTGAGGGGGATTGATGCGAAGAAGGTGTTTTGACCCTAATTTTTAGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAAATAATCGACTGCGACACACAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAAC # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //