Array 1 16728-16394 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCL01000647.1 Streptomyces sp. DfronAA-171, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 16727 28 100.0 33 ............................ CTTCACGGACTACATGAGCATCCTGGCCGGGCT 16666 28 100.0 33 ............................ CGCCCCGTCCGCGTCCAGCTTCGGCGCCCAGGC 16605 28 100.0 33 ............................ CGGCTGGCACCCCCACATTCACGCGATCGTGTT 16544 28 100.0 33 ............................ CGTGTGGGCGGGAGCCCTTGTCCCCCACGGCGA 16483 28 100.0 33 ............................ CGAGGCGACCTGGTGCAGCTCACGCACGCCGTC 16422 28 85.7 0 .........C...C......A...C... | T [16420] ========== ====== ====== ====== ============================ ================================= ================== 6 28 97.6 33 CCGCTCCCCGCGCGTGCGGGGATGAGCC # Left flank : GAGCCCAGCGGGGTCCGGTGGGCGCCGGGGTCGCCGT # Right flank : CGTCATCACCGTGACCGCGAGCGCGGACCGTCTGTTCCCCTGAAGATGGTCCCCCCGCCGTTGCCAACCTTGGCGCGGGGCCTTGGCCGGCTCTGCTCGGCGGTCCGTGAGGCCCTCTGTGGCAGGCCAACAGTACGCCGTCTCGTCTCTGAGAAGCCCGGACAACAAGGTCCCAGGCCATCGAACTGGGGCTTTCGCATGGACCGGGCGACGAGACTCGAACTCGCCCTCTGGACATGGAATCACCCGGCGCCGGCTGTCCCGCGCTCCTGAGCTGCGCCGACGAGCCGCCACGTCCGCTCAAACGGCTGTGGGCGACGCCGTTGATGTCCGCTGTTCGCTGCCCCTACTGACAGTTGTTGTACGCCGCCCCGGCAGTGCGCGCGAGGAGGAGGCTGTCTTGGCGCGGTCGCTATCCGACGGCCGAATGCGTTCAGCCCGTCAGGTGAAGGCTAGACCGCGAAATGCGTTGCGGACGTCAGCCAGCGGCTGCCGGTCGC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTCCCCGCGCGTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 39190-39033 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCL01000141.1 Streptomyces sp. DfronAA-171, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 39189 30 96.7 31 .............................G CGGCGGCAGAGCTGGTCTCCGTGCTCCGCGC 39128 30 96.7 36 ............................G. GGAGATGTACAGGGAACTCGTACGGCTCGCCAGGGA 39062 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 97.8 34 CTGCTCCCCGCGCGTGCGGGGATGGCCCCC # Left flank : AGGCGCGCGGCAACGTCCTTGCGGAA # Right flank : GGGGGCACCCCGTCGAGGTGCACCCTGATGTTTGCCCCCCCCGCGGCGCCCCGCCCCCTCCCCCACTCACCCCTGTTTACCCGGCCACCCGCCCCGCTACTGTTCCCTCACACCGCGCCCGACCCCACGGGCGCCGCACAGCACGGGGGAACCATGATCGAGGCCATCGGTGTCGGGGGACAGGTGTCCTTCGACGGGCAGTACGTGACCATCACTCGCAAGGGCTTCCTCGCGCGCACCACGGTCGGCAAGGGGGAGAAGCGGATTCCGCTCTCGCAGATCTCGGCCATCCAGTGGAAGCGTCCCGGGCCGCTCGTCAACGGGTTCGTCCAGTTCACCGTGCCCGGCGGCGTCGAGGCGCGGTCCAGCTTCGGCAGCCAGACGGCGAGCGCCTCGCGCGACGAGAACAGCGTCACGTTCGACAGGAAGCGCATTCCCGAGTTCGAGGCGCTCCGCGAGGCTGTCGAGGATGCCATCGCCGCCCTGCGCCAGCCCGCACC # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGCCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [18.3-13.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 19847-19574 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCL01000064.1 Streptomyces sp. DfronAA-171, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 19846 29 100.0 32 ............................. CTGTCAAAGGTCCGCTCGCACAAGCACACCGT 19785 29 100.0 32 ............................. GAACGTAGCGCCGAACTTCGTCGTTCCATTCG 19724 29 100.0 32 ............................. GACTACACGGCCCTTTTCGCAGAGGAGTGCAG 19663 29 96.6 32 ................T............ CTCATCTACGCGGCGGGCACCACGGTGCTCCC 19602 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 ATGGTCCCCGCCCGCGCGGGGATGGCCCC # Left flank : GGCGGCGTGTTGAGGGCGCGGCGGATCGCGGGCACCGTCGGGTGCTCGGTCCCCGCCGCCGTGGCGAGGTCGAGGGAAGGGCCGACGAGGTCGGCCACGTTGTCGAGGCCCAGCTCGCGCGCGAGCGCGGTGAGCATGGTCAGGGAGTCGATCGAGATGACACCCCGCTCGACTTTGCTGAGCCAGTCCTCGGAGCGGCCGACGAGCCCGGCGACGGCAGCTTGTGTTTTCCCGGTGCGGGAGCGGTAGTACCTGATCCGCTCCCCGGTGGTCATGCTGACGGGATTGATCATGGCGGTCCCCTTGATGGGTGAGAGCACTCAGTCCCAGAGTACGGCTGACGGGGTGCCACAAGGCGGGCATACTGGAGAGCGCCCCCGCCGGGAGCACTCATTGGCCCTCGTCGTCTCATCGCGACGAGGGCCGCCCCAGTGGTCGGGGCATCTGCTGAAGTTGCTGAAATCTGGGTGCCCGGACAGTAGCCTTCCAGGTCACGAAGT # Right flank : TGGTCCCTGACACGACGAAGCGCCCCCTCCCCGCGCGTGGCGGGGAGGGGGCGGGTCAGCCGCGGATCAAGTCCGCGTCGTCGGGGTCGGGCTCCGGGACGGCGGTTCCGGTGCTGCGGAGCGCGGCCTGGAGGCGGAGCACGTACCGGCGCAGCGCGCCGATGGTGCGGTCCTTGACGGCTCGGCTCAAGCTGGCGCCCCGTTCTCCCGTGCCCGTGCTCGATCGGCTCCTCGTCGCCCACGCTGCGAAAATCTCCCAGAATTCTCTCCCAAGGCACGTCTCGGGCACCTGATCAGTCAGGCAAATATGCGCCCTGAGCTGGCACTTTGGAAGTAGCCGAGGAGCGATGTACTACAACGGCTACGTCTACTCGAACGACATCGAGAAGGGCTTCGACGTCCTCAAGATCGACGACCGCAGGACCGATCCCGCCAAGCGGGTCAAGGTCGGCGAACTGAACGTCCAGACCCAGCCGGACTACTTCGACTGAACCCCCGGG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCCCGCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGCCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 19-355 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCL01000629.1 Streptomyces sp. DfronAA-171, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 19 30 100.0 32 .............................. CGCGCATGTACAGCGAGCTAGCTCGCTCGGCG C [24] 82 30 100.0 31 .............................. GTGCGTCCGCCCGAGCCCGCAACGGCATCGG 143 30 96.7 31 .............................G GAGTGTCTGCACGTGCAGACAACCTTGCGAT 204 30 96.7 31 ........G..................... AGGTACGGCGCGGCCGTCAGTGGTACCCCAC 265 30 90.0 31 .........A...............C...T CGGCGAGCCCGCGCGGCCCGCGCTCGCCGCG 326 30 83.3 0 ...........AT.C...........T..A | ========== ====== ====== ====== ============================== ================================ ================== 6 30 94.4 31 CTGCTCCCCGCGCGTGCGGGGATGGTCCCC # Left flank : GAGCTAGCTCGCTCGGCGC # Right flank : ACTGCGGCACGGCGCCGCAGGGCGGGTCTACGCCGATCCGGGCCGTTTCAGCAGCAGTTCGTCCCCTGCGCGGAAGCGCTCGATGCCACCCTCCTCCCACGTCACCACCACGAACAGGCCACCCATCGCTCCGATGTCTGTCTTCGCCGTCTTCACCGTGCGCCACCGCCCCTCGTAGCCGATCCGGTCTCCCGGGCCGATGAGAGCGGCCACCCTGGTCGGCGTCACCGCTCCGGCTCCTCGACCCGCACGATCCGCTCCAGTGGTACGTCCCACTCGATGCCGCCGCCCGGCGGGCGCAGGAACGCCTGGCTGGCGACCAACCGGTTCTCCCTCTTGGTGCGCTCCTCCAGGACCCAGGTCAGGTATCCCGTGCGCTCCGAGATCTTGTCCCTCACCAGCGTGCCGGCCGGGTACGGCAGCGGTCCTTCGCACAGCATCGTTTCCCCGTTGCCGCTCACTCCCGACCGCCCTTGCGCAGAGCGTCGGCCAGCCGCGCA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 26567-26774 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCL01000393.1 Streptomyces sp. DfronAA-171, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 26567 28 100.0 33 ............................ CGCGCGCAGGTCCGGGGCGACGGGCACCGTGAG 26628 28 100.0 33 ............................ CTGCGCATCGGCCTCGCCTCCGAGGGCCGCAAC 26689 28 100.0 33 ............................ CGACCAGCCGCTTCGCGGCCCGACGAATGCGCC 26750 25 89.3 0 .........................--- | ========== ====== ====== ====== ============================ ================================= ================== 4 28 97.3 33 CCGCTCCCCGCGCGTGCGGGGATGAGCC # Left flank : ACTCCGAACAGGGCTACGCCTTCCGCACCCACGACCACAAGTGGCATCCGGTCGACCATGAGGGCCTGACCCTCATCTTCCGCCCCTCGGGCCGCTCCACGCCCCCTCCCGCGTCGGCTTCCAAGGGATGGAGCAAAGCCTCCAAGCGCCGTCGATTCGGCAACAAGCCGTAACTGACACAACCGATCGCGGCTCTTCGCCACTGGCCGGAGGCCCGATGCATCTGCGCGGCGGCGCCGGATCGCATCGGAGCACCTGCGCGCCGCAACGGCCCGCGTATGACGCCTGGCGTCACGCCCAAGCCGGGAGGAACCGAACCGAGCCATCGGTATCGGTGAGCGGAGCGGAGCGCACCGGGCAGGTGGCTCGACGCGAGTGCCTCGCGTCCGGCCGGTGGAGACGCTCCGGGACCCCGAGAGCCCCGATTATTCTATATGTCCGTTTCTCTCATCCTTGCTCCACGAGGCACTGCACCTTGATAAAAGCACAGCTCACAAAGA # Right flank : | # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTCCCCGCGCGTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //