Array 1 66475-57596 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBFW010000008.1 Azohydromonas caseinilytica strain G-1-1-14 contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================== ================== 66474 28 100.0 32 ............................ ACGCCGCAGGTTCGTCGCCTATTTCGCCCGGA 66414 28 100.0 32 ............................ AGCGTGCTGTCGGCCTTGGGCATCAGCGACTC 66354 28 100.0 32 ............................ AGGCGCTGCACCATTTCCCGCGCCCAGTCCGG 66294 28 100.0 32 ............................ TAGCGGTAGTCGCTGCCCGCTTGGCCGGGCTC 66234 28 100.0 33 ............................ CTGGCGGCGGCGTGAGCGGCGCGCTGCGTTCAT 66173 28 100.0 32 ............................ TTGGCCGCCTCGTCCAGCGGCTCGGCCCAGCC 66113 28 100.0 32 ............................ AGCATGACCTCAGTGGCCGGCGGGCAGTTGCC 66053 28 100.0 32 ............................ TGCACGGAAGGCGGCCCGGTAGCGTGCGGCCC 65993 28 100.0 32 ............................ AATGTCCCTGATGGTTTGCGCCGGCTGGCTCG 65933 28 100.0 33 ............................ ACCACGCCGGCCTGGGGGACCAGCTTGTTCCGC 65872 28 100.0 32 ............................ CGGCAATTACGCGGGCCAGGGGCAAAGGAGCC 65812 28 100.0 32 ............................ AGGTGTGAGCACGGATATCCGAGTCGCGGCGG 65752 28 100.0 32 ............................ TCGACGCGCCGCGCGTCCACGCGCCCGGAATT 65692 28 100.0 32 ............................ TGCGGGGAGTGCGGTGGCGCAGCGGTTCGGGA 65632 28 100.0 32 ............................ TTCCACGTGCCCACGGTCGACCGCAAGGCGTC 65572 28 100.0 33 ............................ AGCCAGCGCCACGGGTGGATCGCTCACGGTCAA 65511 28 100.0 32 ............................ ACACCGAGCCGACGACGGTGCTGATGAGCCCC 65451 28 100.0 32 ............................ TCGTTGTAGACCGGGATGTCGGTCAGCACGAC 65391 28 100.0 32 ............................ ACACCGGCTGCAGCAGAGCAGCACGGGGCATG 65331 28 100.0 32 ............................ CCCCACCCCCCCTTGAGGACAACCTTGGCGGG 65271 28 100.0 32 ............................ TGGAGCAGATCGACGCGCTGCTGGAGCGCTTC 65211 28 100.0 32 ............................ ATCCCGGAAGACGACAAGTGGATCGCGAGGGC 65151 28 100.0 32 ............................ CGCCCCGTGGAGGGCGGCGTCGAGCAGGGCCC 65091 28 100.0 29 ............................ AACAGGTGCAGCGCGTCGAGCAGATCCTG 65034 28 100.0 32 ............................ CGCTCCCTCATTTCCCGCGTGCTCGGTGCCCC 64974 28 100.0 32 ............................ TCATCCAAAACGAGGCCGGATTCGTAGGGCAG 64914 28 100.0 32 ............................ CGGCATCGGGCAACGCAGAAAAGCCCCTTCGG 64854 28 100.0 32 ............................ TACGTGGACCGCCTGGTGGAGATTCAAAGCGT 64794 28 100.0 33 ............................ ACGCGGCCGTCGTGGGCCACGCGGCCCCACTCC 64733 28 100.0 32 ............................ GGTGAAGTCGGTCGCCGGGCTCTGGACGATGT 64673 28 100.0 32 ............................ TGGCCAGCGTTCGCGTACGGGGCCAGCAGCTT 64613 28 100.0 32 ............................ TGCGCGGCAGCGGCGACCATGGCTGCGCTCAG 64553 28 100.0 32 ............................ ACCAACACCGCCGCCGCGCCGGCCTTCGAGCC 64493 28 100.0 32 ............................ TGGTAGCCGTAGCGGCCAGGCGCGAGCACGGT 64433 28 100.0 32 ............................ AAACGAGCCCGGCAGTGGTGAGCGGCGAGCTG 64373 28 100.0 32 ............................ ACGCCGCCCTTGCTGCCGTAGGCCGCGCCGCC 64313 28 100.0 32 ............................ CGCATGTCGCAAGAGTGGGGGGCGGAGCAGTG 64253 28 100.0 32 ............................ AGCTGCGGCGATGGCTTCGCTCGTGGCCTGCT 64193 28 100.0 32 ............................ TGCCCAGGTGCTCGGCTCGCTGAGTCGTTGAA 64133 28 100.0 33 ............................ AGGCCTTCAGCGTGGCGGGCCTGCGCGAGTCCC 64072 28 100.0 32 ............................ AACCGCCCGGTGTGCGCGAGCACCTGCATGGC 64012 28 100.0 32 ............................ ATGCACAGGGACCACATGACGCACGATTCCAG 63952 28 100.0 32 ............................ ATGTAGAAGATCGCGCCGCTTTCGATCTCGAC 63892 28 100.0 32 ............................ ACGGGGCTTTCCTTGTATCCGGCGGTGTTGCT 63832 28 100.0 32 ............................ TCACCGGGCCAAGCCGGGGATCTGGAACAGAT 63772 28 100.0 32 ............................ TTGAAGCCGACCCGGTAGCGGTGGCCGCAGCC 63712 28 100.0 33 ............................ TTGGCGGGGCCCCACGTAAAAAGGCCCCGTTGG 63651 28 100.0 32 ............................ TTGGCGGCGCCTGCGGTGGCCTTGGTCAGGGC 63591 28 100.0 32 ............................ TCTGGATGCGCGCCGTGCCCACGCGCCGCCCG 63531 28 100.0 32 ............................ TGTGTCCATCTATCGGTTCCCCTCAGTATTAC 63471 28 100.0 32 ............................ GCTCGATATAGAGGCCTTCTGAGGTCTCACCG 63411 28 100.0 32 ............................ CTGTCGGGCGCGATGGGCAGCGACCTGTCCAT 63351 28 100.0 32 ............................ CGCCAGCAGTTCGCGTTGCGCCCCTCGCGGCG 63291 28 100.0 32 ............................ TGTGGTTTTTGTGCGTGATTAGCAGGGGCTTA 63231 28 100.0 32 ............................ ATGCTGTCGGCCGTGTGCAGGAGCGAAGTCAC 63171 28 100.0 32 ............................ GTGCCCAGCGCCGCTTTCGCGGCCAGGACGCT 63111 28 100.0 32 ............................ CGCGTAAAACCGCGTGCCCAGCTCGGTCAGGT 63051 28 100.0 32 ............................ TTCAGGGCGCGGTCACGGATTCGCATCAGGTC 62991 28 100.0 32 ............................ ATCGTCTGAATCGCATCGGTCGGGACGCTCCA 62931 28 100.0 33 ............................ TGAATGGGTAGCACTGGCAGGGCTTGCCGTGGA 62870 28 100.0 32 ............................ TCGTGGAACTGGCGGCCGAGGAATTCAATGAC 62810 28 100.0 32 ............................ ACCACCTCGGGCCGCGGGCCAAGTGCGGCGAT 62750 28 100.0 32 ............................ ACGGGAGGCGCGCATGGCTAAGCAATACCCGC 62690 28 100.0 32 ............................ ATTCCAGGGCCGCCATCGGCGCCGCGTAGGCC 62630 28 100.0 32 ............................ ATGTCGGTCCTCTTGCTGTTCCCGCCCCCGGT 62570 28 100.0 32 ............................ ACCGTCAGCAGGTAGTTACTGCCGGAAATGCC 62510 28 100.0 32 ............................ ACGGAGCGCGGGTTGGTGGAGGCCTGCGTGAT 62450 28 100.0 32 ............................ ACGCCGCCCTTCTGTCCCCCGATCACCAGAAT 62390 28 100.0 32 ............................ CGCTCACTTCCATGCGGTAGAGCTTCAGGCCC 62330 28 100.0 32 ............................ ATGAGCCAAGACACGAAGGAAAACGGCGCCCC 62270 28 100.0 33 ............................ GACCTGCAGGCTATCCACCCCAGCCGCGGCGCC 62209 28 100.0 32 ............................ ATTGACGGTACGCTGGATCAAGTTCATGACGC 62149 28 100.0 32 ............................ ACCAGGGCGCGGCACGTCGCCTGGGCGTCACC 62089 28 100.0 32 ............................ TGCACGGCGTCCCGGTAAGACACGCTCCAGCA 62029 28 100.0 32 ............................ AGTTCGCGCCGTCGTCGCTGAGCTCGATGCGC 61969 28 100.0 32 ............................ AAGCGGGCAGCGACTACCGCTGACCCGCTAGG 61909 28 100.0 32 ............................ ACCGTGACTGCCAGCGCGGCATTCGGGGTTTG 61849 28 100.0 33 ............................ CCGGTGCTGAAAACGGTGGAGTTTTACCGCGAG 61788 28 100.0 32 ............................ AAAGAAACCTGGTTTCACGCATTCCCAGGATT 61728 28 100.0 32 ............................ TCCCAGGCCGCAAGGTCCAGCACGATGCAGAG 61668 28 100.0 32 ............................ AGGCGGGCTGGATCACCGCCACGCCCGGAAAC 61608 28 100.0 33 ............................ ACCATGGCCAACGTGCGCGCCGAGGCATGCGCC 61547 28 100.0 32 ............................ TTCGAGCACCGCGGCCTGCATCGCCATGTAGG 61487 28 100.0 32 ............................ ACCAGCGAACGCCGCAGGCGGCGAGGGCCAGC 61427 28 100.0 32 ............................ TTGCGCACGCCGGCCGCGATGGCATCACCAAC 61367 28 100.0 33 ............................ AGCAGCCCGGCGTTCATCGACCTCATCAACTGC 61306 28 100.0 33 ............................ ACGATCGGCGAGCGCTACGCCCGCGCGACCGAA 61245 28 100.0 32 ............................ ATCCGCACCTCGGCGCGGCGCTCTTTGGCATC 61185 28 100.0 32 ............................ AGCGTCACCACCAAGAACTCGCCGCTGTGGAA 61125 28 100.0 32 ............................ AACACCGACACGCAGCTGCGCACCAAGACATC 61065 28 100.0 32 ............................ ACGCGCGCCGGTTTCCGCTGCCGGCTGACCGA 61005 28 100.0 32 ............................ AGCGCTTGATCGACGGCCGCGTCGCTGCCCTT 60945 28 100.0 32 ............................ TCAACGCGCTCGAAATATCCGTCCTCGCCCAA 60885 28 100.0 32 ............................ TTGAAGGCGTCGTCGCCCTCCTTCTCCTGCAG 60825 28 100.0 32 ............................ AGTACAGCAGCACCTGGTTGTCGATGACTTGC 60765 28 100.0 32 ............................ CTTGCGCGCCTTGTGTGGCTTCTCCGCAGCCG 60705 28 100.0 33 ............................ CTGAGCCGGCCCACCGTTGCCTGCCGTACCCGA 60644 28 100.0 32 ............................ TGGTTCGTTTGCGCCGTGAGCCTGTTGTTCGG 60584 28 100.0 32 ............................ TGGCCGAAGTCGGCCGCCATGCTGCCCAGCAG 60524 28 100.0 32 ............................ GACACGGGCGCGAGCACCGGGAACTGCCGGTG 60464 28 100.0 32 ............................ ACCGAGCTGCAGACGCTGGTCGACGACCTGGC 60404 28 100.0 32 ............................ AGGTCGCGCCGCCGTCGTCGCTCCACTGCAGC 60344 28 100.0 32 ............................ ACGCTGAAGGAGCTGCGAACAGCATCAGCAGC 60284 28 100.0 32 ............................ CAGAATGGGCCTCCGGCGCGACGTACGCCGTA 60224 28 100.0 32 ............................ TAGCTGGCATGCGCAATGACAGCGCGCCGAGG 60164 28 100.0 32 ............................ ACCACCACACTGAATCTGCCCACGCTGCCGCA 60104 28 100.0 32 ............................ TCGTCGCTGATGCCGTCACCGTCACGATGAGG 60044 28 100.0 32 ............................ AAAGTCAGATCATTGAGCCGCCGGGCCTGGAA 59984 28 100.0 32 ............................ TTACCCATCGCCGTCCGTTCTTTGCCCGCACG 59924 28 100.0 36 ............................ TACAAGCTCCGACTGGAGCTGTCGGGCGGTGCGACG 59860 28 100.0 32 ............................ TTCTGCAGTAGCGTTTCGCTCACGGCTTGACC 59800 28 100.0 32 ............................ AAGTCGGCATAGAAGGGGTCGCGGTAGGACTT 59740 28 100.0 32 ............................ AGGTTCACCAGTGCATTGATTGCCCACTCGGC 59680 28 100.0 32 ............................ TCATGGCCCGGGGCTTCGTGGTCAAAGAGGGC 59620 28 100.0 32 ............................ AGCTGCAGCGGAAGCCCCAGCGCCTGGCGCCC 59560 28 100.0 32 ............................ ACATAGAAGCGAGTGCCTTTCACTTCAATTCC 59500 28 100.0 33 ............................ CGCCGCCCCGAGTGACCCCCGCGCGCAATTGGT 59439 28 96.4 32 ....................T....... TTCCCGTCAGCCCGCAGCGGCGTTGCCGTGGG 59379 28 100.0 32 ............................ TTGGGAAAAGCTGGGCGCAGGCCTGCGCGCGC 59319 28 100.0 32 ............................ TGCTGCGCCGGCGCAAAGCCGAGGCCGCGCTG 59259 28 100.0 32 ............................ ATATCCCGAAACCCGCGTCGATCCGCGAGCTG 59199 28 100.0 32 ............................ ATAGCAATCATCCTTGGCGCCCTGTCGCTGCG 59139 28 100.0 32 ............................ AATGCCTGCGGCACGCCGCGTCGATTGCGTCG 59079 28 100.0 32 ............................ AAAGCGAGCGGATCAATTCAACCTTGATCGGC 59019 28 100.0 33 ............................ CGCGCTCACCGGCCGCGAATGCCGCAGCACTGG 58958 28 100.0 32 ............................ TCGTGCCCATTGCTGGCGTCGCGCCGACTATG 58898 28 96.4 32 A........................... AATCTCCGGCCGCGATCCGCTTGCGCAGCGTG 58838 28 100.0 32 ............................ AGCCGCAAATCGCGGGGCGTGCCGTAGAGCAC 58778 28 100.0 32 ............................ TGCCGGCGACGAATGCCGCGGGCCACGTGGAG 58718 28 100.0 32 ............................ CACGCGCGCGGCGAGCTCGGCCAGGTCGCCGG 58658 28 100.0 32 ............................ AGCACCGCTGGTCGCCTGGTTGAGGCCTAGCA 58598 28 100.0 33 ............................ ACGTCGGGGTTCCCGCGACATGAAGCGGTTTTG 58537 28 100.0 32 ............................ CGGGGCCCTTAGGTGCCCCCTGCTTACGCCCC 58477 28 100.0 32 ............................ ACGACCGCTTTCGTGCTGGGCCAGGCGGGCAC 58417 28 100.0 32 ............................ ATGCCAGTTGCAGCGCGGTAAAGGTCTTTCCG 58357 28 100.0 32 ............................ ACTCCTTGACGCTCTCCGCGTGGCTCTGCGCG 58297 28 100.0 43 ............................ ATTGACTCCGCGCCCGACAACGGCACGAACATGTTCACTGCCG 58226 28 100.0 32 ............................ AAGCAACGATGAAGCCGTGACGGCCGCCGCAG 58166 28 100.0 32 ............................ CTGGAAGGCAAGCTGCGCGAGGTACTGGCCAC 58106 28 100.0 32 ............................ TTGCAGAGATCGACCGCCCAGCGGTGTTGAAT 58046 28 100.0 32 ............................ ACGCGCCAGGCGTCGCTGGGGTCTGTCTTAGC 57986 28 100.0 32 ............................ TCGAAGGGCATGCCGTAGACGATGCCCATGGG 57926 28 96.4 32 ..........A................. TCGTCCAGCAGTAACAGGCGCGTGGCGCCCTT 57866 28 100.0 32 ............................ ATGTCGAATGGCTCGCGGCCAACCGCGACGAG 57806 28 100.0 32 ............................ TTGCCGCCGCGCCAATAAGTCGCGCCCATAGG 57746 28 100.0 33 ............................ TTGTTGTCAAGAGCGACGAGGGGGAAGAGTGGG 57685 28 85.7 32 T..........CGC.............. GGTCCGTCCCCGCTCGCGCGGGACATACCCCG 57625 28 75.0 0 C.GA.......C.C.......CC..... | GA [57600] ========== ====== ====== ====== ============================ =========================================== ================== 148 28 99.7 32 GTTCACTGCCGAATAGGCAGCTGAGAAA # Left flank : CGAGCTGGCGCGGCTGATGGCGCAGGACTGGCTGCGGGGCATGCGCGACCACGGCGAGGTCTTCGGCATCGCCGCGGTACCGGCCGGGGCGCGGCACCGCACGCTGCGCCGGGTGCAGGCCAAGAGCAGCCCGGAGCGGCTGCGGCGGCGGCTGATGCGGCGGCTCGAGCTGAGCGCGGAGGAAGCGCTGGCGCGCATCCCGGACAGCTTGGCCGAGCGGCTGGCGCTGCCCTTCGTGGCGCTGGCCAGCCAGAGCACGGGGCAGCAGTTCCGGCTGTTCCTGCGCCAGGGCCCGCTGCTGCCCAAGCCGCAGGCGGGCGAGTTCAACGCCTACGGCCTGAGCAGCACGGCCACCGTGCCGCACTTCTGACCCTTTTTCCGGCGCCGCGCGCAAGTGCTTGATGCATCAGGCACTTGCGCGCGCCCGTTGCGGAAGGGTCCGGAGCGCACTTCGCGCGGAAAGCTCTTTAACAACGGGCACTTACAATCGCCGGGCTCTA # Right flank : TTACCGGCGCCGCCCCCCGCGCCGGCGCGGCGAACTGCCGCCGCCATCACCTGCGTACGGCGTCGCGCCGCTGCCTGCATTGGCCGAGCAGACTTTCTTGCTCGCGCTGTAAGAGCCGTCGTTGCAGACGAAGCGCGCGCCGTCGCAACGCGCCACGCCGCCCTTGGCGCCGGAGCACGGCCGGTTCGCCGCCGCGGCGCCGAACGCCACCATCAGCCCGCACAGCGCGAGCGCACCCGCCCGCAGGCCCTTCGAGGTACTTCCCACTTCTCTTCTTTTTTCCACGGCGCCTCGGTGCCGCCCGCCGTGGACTGCCCTCCCTGGCCGGACGCCTGTTGCACGACGCGTGCCGCCGCCCGGTCGGCAGCGCCCGCGCTCCACGGCTGCCCGGCACGCGAAAAACCCCGCCTCACTCCGCCACCGCCTCCGGCTCGCAGCTGCGCCGCAGCAGCGCCGTCGCCTCGGCCTCCGGCAGCGCCGGGCTGAACAGCCAGCCCTGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAATAGGCAGCTGAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //