Array 1 1518695-1516163 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066065.1 Schaalia meyeri strain FDAARGOS_985 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 1518694 36 100.0 28 .................................... GTCATGAACTGGTCGACGAACCGGGCGA 1518630 36 100.0 28 .................................... GACGACAACATGAGGACCGCCCTACTGG 1518566 36 100.0 28 .................................... AGACCCATCAGGAGGTTATTCATGGTCA 1518502 36 100.0 28 .................................... GCAGACCCCGAAGGGAGCGCCGGCCGCA 1518438 36 100.0 28 .................................... GTGGGGGGCCTTGGTTTACGCGCTCAGC 1518374 36 100.0 28 .................................... CAAGTCTGTCGCAATGGTCATGACCCAA 1518310 36 100.0 28 .................................... GACGACGCCCGATCGGGTGATCGCGGAT 1518246 36 100.0 28 .................................... GCCTTGATAGGACCCATCATGCATGGAA 1518182 36 100.0 28 .................................... GACCGGGCGAGCGAGTGTTCGGGGTCTG 1518118 36 100.0 28 .................................... GGCAAGTCGCGGCCCATGCTCTTCCACG 1518054 36 100.0 28 .................................... CCTGCTCAAGGGCATGCTGCCTGAGCCG 1517990 36 100.0 28 .................................... CGGGCTAGTGGCCCTCGCACTGAGTGCT 1517926 36 100.0 28 .................................... GATCGCGCTCGCGGGCACGATCAGCCTA 1517862 36 100.0 28 .................................... ATCGGCGTGCTGTGGGCGATCGAGGGCG 1517798 36 100.0 28 .................................... GGCCGGTCTTCGTTGTCCCCACATCGTG 1517734 36 100.0 28 .................................... GGACCCGGCGGCGATCTTCGGCGCGGTG 1517670 36 100.0 28 .................................... TCGTGGTGCGAATCGTGGGCTGTCGAAG 1517606 36 100.0 28 .................................... GGGACGCCGCGCTCACGCAGCGCTTCGG 1517542 36 100.0 28 .................................... GAAGACGCGGTGTCCATCGTAGTAGGCG 1517478 36 100.0 28 .................................... GTTGCGGCGCTCACCATAGCTCCGAAGG 1517414 36 100.0 28 .................................... CGACCATGAGTAACCTGAAGCTGGCTCA 1517350 36 100.0 28 .................................... ACGTTCGCCACCGTCGTGGACTCGCAGC 1517286 36 100.0 28 .................................... TCGTGAATTCGCGGTCGTTGAGGGTCAG 1517222 36 100.0 28 .................................... CCCTCTTTTTTGTCGATACATTCGATTA 1517158 36 100.0 28 .................................... GACCAGGCCAGCGCCGTCGAAGACGCCT 1517094 36 100.0 28 .................................... CTTGTCTTGGTACCAGCGTCCGCACCGC 1517030 36 100.0 28 .................................... TCCGGTCTGCGCCGTGTACATGTTCTTC 1516966 36 100.0 28 .................................... GCGCTTGGCATGAATCAATCTCAGGTAT 1516902 36 100.0 28 .................................... CAAATCTCGTCCATCGTGACCATGTAGG 1516838 36 100.0 28 .................................... CTCGCCGGCGTCGAGTACACCGGCAACC 1516774 36 100.0 28 .................................... ATGGTTGCGGCAAGGTAGAAGCGGATGG 1516710 36 100.0 28 .................................... CGGAGGATGTCACTCATGGGCGGCCCCC 1516646 36 100.0 28 .................................... AGGAATCCAGTGCAAGTCAGTCATGACG 1516582 36 100.0 29 .................................... TGAGCGAGGTCGCCGTGCGCGGCCAGGAC 1516517 36 100.0 28 .................................... GTGCCGGCCGCGCGGATGGTTCCTTTGA 1516453 36 100.0 28 .................................... ATCGAGTTCACATCCATTGCCACGCCGA 1516389 36 100.0 28 .................................... GTCGGCTCGTGCACCCAGTGCGGCGCGG 1516325 36 100.0 28 .................................... CCACAAGACCGCGATCGATGCGGGCATC 1516261 36 100.0 28 .................................... CGTGTTTCCCGCGCCCATTCCTGCCCGC 1516197 35 77.8 0 .......................GC.C-...AT.AT | ========== ====== ====== ====== ==================================== ============================= ================== 40 36 99.4 28 CAGTATATCAAAGGGGATTGGTGATTGATTCCCAGC # Left flank : GAAGGACATGGGATTCCTGCTGTGGCTGAGTCTCTGGCGCAGTCGTTTGGACGGTACGTGGAGGGGGACGTGGATCGTCTGCGTGTGGTGTCGTGGCAGGGGCCCTCGGCGGTAGGTGTGGGTGAGTGAGATGGCGGATGACGCAATGTGGTGCTTGGTGATGTTCGATCTTCCGGTGGAGACGAAGCGGCAGCGACGCGAGGCAACTAGGTTCCGTCATGATTTGCTGGATTGGGGTTTTTGTATGGTCCAGTTCAGTGTGTACGTGAAGTATTGGCCGACCGGTGGGCAGGACCATGCGACGCTGCGTGCGATCAAGACTCACCTACCGGAGGGGGGCCAGGTGCGAGTATTGGCTTTAACGGACCGGCAGTGGGCCACGGGGCTTCGTTTTGAGAACGCGAAGCCCCGGAAGGAAGCTGGAAGCCCCGAGCAGCTCATGATTTTCTGACTGAGATCCCCTGGTTTTCCGCAGGATCCTGCGGAAAACCAGGGGATCT # Right flank : TGAGGGTGTAGTTGGGGTCTGAATCCTCCTGTTTCGAGGAGGCAGCGGGTGATGTAGTTGGTGAGGTTTCGGAACCCGAGTGCGGATCCGCGTAGGTGTTCGAGACGTCCGTTGATCGCTTCGGTAGGACCGTTGCTGGTGTGTGGATGATCGAAGTAAGCCAGGATGTCCCGGGATCGGCGTTTGAGCGTTCTTCCCAGTGTGATGATCTCCGTGAGGGAGCGAGGGACACCCGCGTTGCTGAGACGGTCTATTTCGGCTTGCATCAGGGCCTTACCGCGGATTTTATTGGGATCGCGGTAGGCGTCGATAATACTCTGGTAGACGCTCCAGGTGACTTCGAGGGCGACGTGGCAATCGCTGGCGAACAGGTCGAGGATCCGGTGTTGTTGGCGCGGGGTGAGCAGGCAGGATCTGGTGTGTAACATTCTGCGGGCCTTGTACAGGGGATCGGTGGCACGCCCACGCCGGTGGTGGAGTTCTTGCTGGATGCGCCTGCG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGTATATCAAAGGGGATTGGTGATTGATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //