Array 1 1994-2354 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMPY01000002.1 Microbispora rosea subsp. aerata strain JCM 3076 sequence002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1994 30 100.0 33 .............................. TTAAAGTCTGGTGTACTGTTCTTCTTGTCAACG 2057 30 100.0 35 .............................. CGCTGCGTCGAACACGGCACCCTCGACAATCCCCA 2122 30 100.0 35 .............................. GGGTTGTGGCTACGGCCGATCTCGTCCAGGTAGAA 2187 30 100.0 39 .............................. ACGGGAGCACCTGCGGCTCCTGAGCCGTAGTTCATGCTT 2256 30 100.0 39 .............................. TGGACGGTCGGGACGATCTGCATGTCCGCGTCCCACAGG 2325 30 93.3 0 ..............A....A.......... | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 98.9 36 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CCGCAGCGTCGCCTATGACGAGCTGTTGTATCTGGAAGCGCTGCAGCTCACCCGCACCTGCCTGGAAGGCACGCCGTACAAGCCGTTCCGGATCTGGTGGTGAGGCCGCGTGTACGTGGTCGTGGTTTACGACACCCTGGCCAAACGCAACGCCGCGATCCTGCGCCTCTGCCGCCAGTACCTGCATCACGTGCAGAGAAGCGTATTCGAGGGCGCGCTGAGCCCGGCACAACTCCGACGTTTCCGACACCGGGTCGAAGAGGTGATCGACCAGTCGTACGACAGCGTGCTGGTCTTCACATTCCCGCCGGGCACGACCCCGGAGCGCCAAGAATGGGGCGTACCGCAGCCGGCGCCCACCGACATCCTGTGACGGATACCACTTTTGATCATGAATGTGCAGCGAACCTCCCGGGCTTCATGCACGACCGGAGGTTCGCTGCAAAACCCGGCCCCAATCCCGCCAGAAAGGCCAGCACAACCTGCGGCTTTATACTGGG # Right flank : CCAAGGCACGACCAGGGCGTTGGCATCGAGCCTGGTGAGGTCCTTATGCGGCCGGCGACAAGCTCCTGACCGCCGCGATGCTGTGCACCTGGGCGTACGGCTTCGCCATGGTGGACGGCACCACCGGCCGCTCCTATCTCGCAGTCATGGACGAGCTGTGGCGGGCGCTGCGCGGGGCGCCGGGATTGGTCGAGTACGCCGACAGCCTGACCCGGCTCAACCGCGCCAAGGGCATGGCCTCCATCATGATCACCCATTCGCTCGCCGATCTGGAGGCACTGCCCACCGAGGAGGACCGGGCCAAGGCACGCGGCTTCATCGACCGCAGCGCCATCACCGTGCTGGCCGGGCTGCCTCCGCGTGAGCTGGCCCGCGTCAGCGAGATCACCCGCCTGACCGGGCCGGAGCAGGAACTCGTCGCTTCCTGGTCCGCACCGGACTCCTGGCAGCCGGGCGTACGGCACCCGGGTCGCGGCAAGTACCTCATCAAGACCGGCGAC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 80641-81516 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMPY01000001.1 Microbispora rosea subsp. aerata strain JCM 3076 sequence001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================================================== ================== 80641 30 100.0 79 .............................. GTGAGGGGTGCGCCGGTGATGAGGCGGGCGATGCGGTCGAGGCATGCGGCCATGCCGCGGCGGCCGTCGCCGTCGCGGA 80750 30 100.0 38 .............................. TCAGACGGGATGCCTCTCCCTGCGGGGACCCGATGATG 80818 30 100.0 37 .............................. AGGTCCGCGTCCCACACGTTGTGGCCGGTGACGGGGC 80885 30 100.0 38 .............................. ACGGTGGGTTTGACGATCCGGAAGTTGACCCGGCCGTA 80953 30 100.0 38 .............................. ACCAGTCGCAGCGGCTGATCGGCGTGGGCATCACCCCC 81021 30 100.0 36 .............................. GATGCGGCCAGCATTGAGGCGTACGGCGCGTACAGT 81087 30 100.0 33 .............................. CGGTGCAACTGCTGGACGTAGTTGACCGACACG 81150 30 100.0 38 .............................. GCGAAGGCCTTCTGCATGTCCTTCGCGTTCAGGCCGAG 81218 30 100.0 39 .............................. GTGGTCCGGACACGCTGCCCGATGGTGTACATGATCAGT 81287 30 100.0 36 .............................. TTTCCGCAGAGGCTGACGCCTTTCGGAAGTGCGTAA 81353 30 100.0 35 .............................. ATCAGGATGTCGTCGTACTGGCCGACGACGCCGGC 81418 30 100.0 39 .............................. AGATACCGGGACGTGACGGGTTTCGCCTCGATGGCGCCT 81487 30 73.3 0 .............TC.T.G...CA...C.T | ========== ====== ====== ====== ============================== =============================================================================== ================== 13 30 97.9 41 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CGGAGCGCTTGCGGCCCAGTAGTCGCGCGAGATCATCCCGCATATATCCCGCGCGGCTGATCGGTTGCCGTGGCAGAGGCACACCCGAAGACCAGCTCTATGCCCGCACATGCAAGCTCGGCCGATCATGGTTCCGGGCAGTTCCGAGGCAAGTCGGCGGATCTACGCGGTCCGTCTAGAACCGCCCTGAACAGCCTCGTACTGCAACTCAAAGTGCAACTAACGGCGCTCCGTTGGGCCGGGGCTGAGGAACGAAGTCCCGGCCCGTCGATCGCCCCCAGCCACATACAGTGACCGGCCACCCCGGGCGATCGTGAGGCCGCACCACTTATCTGCCCAATATTCGGGTTCGGTGACATGGACCGACGCCGGTGGCATCATGGTCAACCGGACGGTGTTGCAGCAGACCTCCCGGGTTTTCTGCACGACCGGAGGTTCGCTGCAAAAAACCGCCGTATCGCCCCATTGGAATGCCCCGTGAGCTGGGACTTTACTTTGGG # Right flank : TGTTGCGGGCAGTGCGGCCCAGGGTGGTGTGTTCCGTAGGCGGCCCGAGCCGCCGACGGCCGGGACCGGCCCCCAGGCCGCACGCCCGGCCGGCGGGTGGGCGATGGGCCGCTGCGGCGGCGCGTAGCGCCGCCGCCTTGATTCCTAAGAGCGTATTTCGGCAGCGTTCGATCGCTTAGCCGCCTAGGAGCTCCGTTATGATTTCAGCGATCTCTCTAGAGAAGCTCTTCTCGGCAAGGGCCTGCCGCGCCTGACGGCGAAGGACGGTGAAGTTGCCGCTTTCATTAATATCTAGCCCGGCCACCACTTCGGCCTCCGCGCGCCCTAGGGCTGAAAGCTGCCGATGTACAGGGTCGCTGGCTCTGTATGCAGGGATTGGTAGCTTCCATATGTGCTTATCAATGTGGCGCTCGTCTTTGCCGTACGACATATATGGGCGGACGAGATCGGTGATCGCGGGGGAGTTTAGGATAGCGCAGAGGAAGTAGCCCTCGTCCGAA # Questionable array : NO Score: 2.88 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.27, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 6632-7192 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMPY01000022.1 Microbispora rosea subsp. aerata strain JCM 3076 sequence022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 6632 30 100.0 35 .............................. TCGGGCGGGCCGCCCAGACCGCGGCCCGCGTGCCC 6697 30 100.0 35 .............................. ACTGGCAGATCGACCAGGCGCTGAAGCAGATCGCC 6762 30 100.0 39 .............................. GCGATGGCCTTGAGGGCGGAGGACTTGCCTGCTCCTGCT 6831 30 100.0 36 .............................. AAATCGCGCCGGAACCGCTCCGGATCGGCAGCGTAT 6897 30 100.0 38 .............................. ATGATCAGCGTGGCTCTGTCGCCCAGGCTTGTGCCGCC 6965 30 100.0 35 .............................. GACAGGGACCCTCCCGGCAGGACCGGAGTGTCCGG 7030 30 100.0 36 .............................. TGCGCGAGCTCAACCACGCGGGCCGCCTGGCTGCGG 7096 29 93.3 38 ..................-....G...... ATCCACCGCTGGTAGTACGCCTGCGCGATCTGCGCTGA 7163 30 80.0 0 ...............GA........CTTC. | ========== ====== ====== ====== ============================== ======================================= ================== 9 30 97.0 37 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : GCCGCGTCGCCGCGTGGCCTGCGGGAACACCGGTGCGCTGTGCCCCATCGGGACCATGCCGTACGGGCCCACTCCCTGAGAGTGGAGCTGTCGCCCCAGCTCGGGCGCCTCTCGCGCGAGCAGGTCGTACGCCAGGGAACGGCCGGGCGCCAGCACCTTCGCCCACGCGAGTTCGGTGGCCGCCGTGGTGACCTCTATCCGTAACCTCACAGGATCCTCCCTGCATTCGCCTTTCACTAGATACAGATGGACGACGGCGGGCACGGGCCGCGTACGTGGGCGTTTGCGCAGGTAGGGGGAGGAAGAGTTATTCGAGGCGTGTGTCAGGGCGCTCGCGTGCCGGACAACCGGCTACCCTTCCTGAGAAGGTGCCGGGGAGCTGATGGCGATCATGATTTTGCAGCAAACCTCCCGGGTCTTCTGCACTACCGGAGGTTCGCTGCAAAATGCCGCCGCGAGGCGCCGGTCTTGCGCCGCCTCACCTGCGCCTTTACCGTAGG # Right flank : CCACGAATCCCTGACCTGAGTTCTTGCAGGTCAGGGGGACTTCGCCCTGATCTTTGCGTCTCGTCCATCTGTAGTAGGTGAGAGCGAAATCGTGGGCGAGGGGGCGGAACGTAATGGGGATCTCCCGGGGGCGGACCGGGACGGGCGGGGCAAGAGCGCTGCTGGACTTTGTGTCGGGATGGGGGATCGTGGCCCTCGCCGGTGTGGCGGGCGCGGTGGCCGCCGGCACGGTTCCCGATGTGATCAAGAGCTGGCTGGGTGAGCAGCGTCCGTTCCTGACGGCGCTTTGCCTCGTGTCCGCGCTGACGTTCGCCGCCATCAACCTGTGGCAGCAGCGCAGCAAGGGCGTCGGCATCGTGATCTCCTTGCCGCAGACCACCTGGCGAGGGCCGTGGAGCAGCCAGTGGATGGCGGCGGCCGCCGACCATGCCCGGCGCCACCACGACTCGTGCTTCGTCGTACGGCGTGCCGTTCCGGCCGCGCGGCCGGGTGATGACGAA # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 21574-21206 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMPY01000022.1 Microbispora rosea subsp. aerata strain JCM 3076 sequence022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 21573 30 100.0 39 .............................. GCAAATTCGGAAATCTCTTCCGACTGCGCCGTCATAGCT 21504 30 100.0 39 .............................. ATCCCGCAGCATCACGCCTTTGCGGGGGCTGGGGAGCTA 21435 30 100.0 36 .............................. ACCCGCACCCGGGAGCAGATGGCGACCGACCCGGAT 21369 30 100.0 37 .............................. ATGACGTACCGGATGCGGCGCAGGTTGCCCTCGCGGA 21302 30 100.0 37 .............................. GTTACGTATCTCGCGTGCGTTGGGCTGGTCTAGATGA 21235 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 100.0 38 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CCGGCACGGGCCAAGACGAGTTGTTCGCGCGGTCTTCACCGACAGCCCCTTCGACCTGGTTCAGGCCGAGGCCCAGCACCGCGATCACGCGATCAACGAGCAGGTCAACGCCGATTTCATCGACGGGCCGCTGGCGCGCATGCCCTCGGGTGTCTTCATCGCCAACGCTGCGTGGCTGACCCTGGCAGTGATCGCCTACCATCTGTTATGCGCCCTCGGTTGCCTGGCCTCGGCCTTCCACGCCAGGGCGCGCGGGGTAACACTACGCCGCCAGCTGATCACCACCCGGCCCGCATCGCCCGTCATGGCCGCGGCCACATCACCGTGCACCTACCCGGACACTGGCGATGGCAGGACGCCTGGATGAACGCCTTCGAGGTACTCTGGACGACGGCGTTTGCAGCGAACCTCCCGGGCTTCTTGCACTACCGGAGGTTCGCTGCAAAATCCCGCCCCGGGAAGTGCGTAGCCCAGCGCTTGAGCTGCGCCTTTACGGTGGG # Right flank : CGGAGCAGTTTTCCCAGCGCGTGCACTGCAGCTACGAGCGGCGGGTATGTGACACGGCGGCCGGCGGGAAGGAGGTGGTGCTTCACCTGCGGGTACGGCGGTGCCGATGCGGGAACGACGACTGCACCGGAGGACCTTCGCCGAGCGGGTGCCGAGTCTGACCGTCCGCTATGGCCGCTACTGCCTCCCACTCCGCACGCTGCAGGCGGTCGCCCCCGCCTAAGGCGGCCGGGCCGGTACCCAGCTCACCCAGCCCCTTGCCGCCACGGTGAACCGGATGACGTTGATCCTGCTGATCCCGTATCCGCCGAAAACCCCGGGTGCTTGGGTTGGATGGACGACTTCGCCCTGTGCTGCGGCCGTGCGTACGGCACGATTCTCATCGACATCGCCGCCAGCCCGGTGGTCGACGTACTTCCCGAGCGATCAGCCGACGCGCTGGCCGCCTGGCTGCGCGACCCGCCCTGCGATGGGGATCTTCTGCCGGGACAGGGCCGAGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 150175-149778 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMPY01000005.1 Microbispora rosea subsp. aerata strain JCM 3076 sequence005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 150174 29 96.6 32 ............................G AAGGTCGAAACCCATCCCCTCGCCAGGGTCGC 150113 29 100.0 32 ............................. AAGATCAGCTTTTTGGGGGGTCTTCTGGGTAT 150052 29 100.0 33 ............................. AGCCTCCTAGGGGGGTCCTAGCAGACTGGACGA 149990 29 100.0 32 ............................. GACTGCGACTGGCCGTTGCTGCCGAAGTTGTC 149929 29 100.0 32 ............................. TGCTGGCCCGCCGTGTTCGGTCCGGAAGGGTT 149868 29 89.7 32 ..............T....A.G....... TTGCCGCTGCCGCCAGGCATGGTCATCGGGAC 149807 29 82.8 0 ..............T....A....T..TG | C [149783] ========== ====== ====== ====== ============================= ================================= ================== 7 29 95.6 32 GTGCTCCCCGCGCACGCGGGGATGATCCC # Left flank : GGACAGGGACCCACTCATCCCACAACAACCCGGCTACGGCCCCGCTGTCAGCCATATGCCGCCACAACGGCAACCAGCCGTCGCTATCGCGATCATGCTTAGCCCACACCGCTCGCGCCGCGCTGGATAAATTTTCGACAAACGGATGCGACAGCCCTGAATTGAGCATGCACACATCTAAGCTCCCGCCTGACTACACAAGCACCTCAACAAGAGATCCTTGATCAGATTGATATTTATACATAGTTAGATAGTCCCACTTCATCCACATTGTTTATAAATGTAGTGCTACTAATAGAATCGACGCTTACGTTCCATATGCGGCGAAGGTGTGCTTACATCCACTGCCACGAGCGCTCGCGTTGGCCCCCTTGGGCACCATCGGGCATGCTGAGGCGGTGAAGCATCGAAGGCTGGAGCGGGGCGGGCCCGAAATGTCCGAGTCGACGAAACTACTCGAAAAGCAGGCCCACAGCTCGCATCCTCCCAGGTCATGAAGT # Right flank : CCTGGTGGGCCCGTCTGCTTACGGGTGGGTCTTTTGTGTGCTTTTGAGCACGAAACGCCTGGTGGCGTATCGGCTTTGATCCGTACGAGCCCCTCGATGCGGGCAGGCGAGGGGGCCTGGCTACGCTTGCCGTCGTGGCAGATGGGGACGCGTACGTCGAACTGAGCCGTGAGCAGTGGAGCGACCTGCGCAAGAACACACCGCTCACGCTCACGGAGGCGGAGCTGGAGGAGCTTCGCGGCGTCCACGATCCAATCGACCTGTCCGAGGTCACCGACATCTATCTGCCGCTCACCCGGCTGCTGAACCTGCATTTCACGGGGTCGCGGCAGCGCGGCGCGGCCGTCGGCGCGTTCCTCGGCGAGCAGAGCGCGCCCCCACCGTACGTGCTGGGCATCGCGGGCAGCGTCGCGGTCGGCAAGTCGACCACGGCGCGCCTGCTGCACGCGCTGCTCGCCCGCTGGCCCGAGCACCCCCGCGTCGATCTGATCACCACCGAC # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 159785-160363 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMPY01000005.1 Microbispora rosea subsp. aerata strain JCM 3076 sequence005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 159785 30 93.3 31 ............................GA AACCGATAACCCAACAGCTTTGGTTTCTGCG 159846 30 96.7 31 .............................A GAAGGGCATGCGGCGGTGAGGATGAACGCGA 159907 30 96.7 31 .............................T CGTGGTAGCTCCTCGCCTTCCAGACCATGTG 159968 30 100.0 31 .............................. GGGAGCGCGGCGGCAACAAGGTGTGGCCGAA 160029 30 100.0 31 .............................. TGGGCACCGGCCAGTTCTCGGCCGGGGCGCC 160090 30 100.0 31 .............................. GTTCGGCGGCCGAGCGGGTCCGGTCGGCGGT 160151 30 100.0 31 .............................. TGAAGGGCTCCTGACGCCGGTCGCATGCGAC 160212 30 96.7 31 .............................A GGACCACGCCCAGGAGCCCAATCGACGGATT 160273 30 93.3 31 ......................G......G AATCGGTGGGGGTGAATTCGGCGGTGCAGCC 160334 30 83.3 0 ............T.T......G.....G.T | ========== ====== ====== ====== ============================== =============================== ================== 10 30 96.0 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Left flank : TTGTCCTGCCGGCCTGCGCGGTTTCCTCACCCGATGGCTGATGGAAATCTCGCCCGGCGTCTTCATCGGCGGCCCTTCCGCACGTATTCGGGAAGCGCTGTGGAACGAAGTGCAGCACTACGCCGACACCGGTCGCGCCCTTCTCGCCTACACCACAGACAACGAGCAAGGCTTCACCTTCGAGACCTACGACCACAAGTGGCATCCGGTTGATCACGAGGGACTCATCCTGATACGGCGTCCCAAAGACGAACCAGTCGTAAGTGCCGCACCGGTTCCCTCTGGCTGGAGCAAGGCCGCAAAACGCCGCCGCTACGGCCGCTGAGGCTTGGCTATGCCGGGTAGAAAAACCGCATATACAACTCCGCAGGCCGGTGTCAGCGTCGGACTACCTGGCCGTGGCATTCTGCAGCAGGAGTAGGAGAGTGTCCGAAATGTCAGAATTCTCGATAGTGCTCAAAACTGAGCCCTCACGCCGATAACACCGCAGGTCAGCCAGT # Right flank : TCACCCTTGTCCACCGGAAGTGTGTGCACAGCCTGTGGATAAAAATCGATGGATTACTTCGGTGCGTGACGGGGAAGGAATGTCAGTCCCCTTGCCGCGCCGTACGCTGGCGGTGTGATCGTGGGCATTGGGGTGGACGTGGTCGAGGTGGCGCGTCTGGGCGCGGCCCTGGAACGCACGCCCGCGCTGCGCAAACGCCTGTTCACCGACGCCGAGAGCGCGCTGCCGCTGGAGTCGCTGGCCGCCCGGTTCGCCGCCAAGGAGGCCGTGGCCAAGGCCCTCGGGGCTCCGCCCGGCCTGCGGCACCTCGACGCGGAGGTCGTGCGCGGCGAGCTCGGCCGTCCCGAGCTGAGAGTCACGGGCCGCGCGGCGGAGGTGGCCCGCGACCTCGGCGTACGCAGGTGGCACGTCTCCCTCTCGCACGACGGCGGCATGGCGGTCGCCTACGTGATCGCCGAGTCCTGAGGTCGATTCCCCCGCATACCTCGGCCGGGCCAGCC # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //