Array 1 190149-190501 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVBS01000003.1 Sphingobacterium gobiense strain ACCC 05757 ZB100002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 190149 36 66.7 24 .......G...A...TT.CC......TGTC..A.T. TGTTTTTGAACGGATCACGTTCTT 190209 36 66.7 30 .......G.G.....TT..G....G.TG..T.T.AA TGTTATTAAAGTGCTAATCCGGCGAACGGA A [190220] 190276 36 100.0 22 .................................... GGAGTATCTGGGAAAGCGTATA 190334 36 91.7 28 .................G.T....G........... GTGGTGGTTTTGTTCGTTTTCATAATCT 190398 36 83.3 32 ...................TAA..G......C.C.. TCTAGAGCAACTTCAGATATCGTTAAAGATAT 190466 36 69.4 0 ......C............TG...G..AC.GCG.GT | ========== ====== ====== ====== ==================================== ================================ ================== 6 36 79.6 27 GTTGTGTATACCTTTCAAAATGTGATCTGTAACACC # Left flank : TCGTATCCTAATAAGAATTCTTGATAATCCTCGATACCGTCAAGCCGTAGGAGGCTGCGGTGGAATCGATTTCTGGTTTTGCTATAGAAAGCATTGATGGCGGCTTTCACCTGTGTCTTCAGAAACTGAAAAAGCTCTTCTTCGGATTATAAGTTTTCCCGAAACAACCATAATCGGAGGAATGCTTCCTGCGCGATGCTTTCCGCGACGCACACATCCTGTGTTGCTTTTTCGGTACGGAAAGCGAGATAGCCGTAATATCTTTTGTAAAAGAAATCCAGCCCTTTCTCTTGGCCATTTTGTAATAAAGCCAGATGTATGGCTGTGCTGTTTAATTTGTTTGGTTTATGCATCGTTCTGTTGTTGATTAGTAACCTATCCTATAACAGCTTTCCGCAGTCCCGGTGGTCTTTGCTAGTCGTTTTCAGGCAGGACTGCGTAGGCTGTTTTTATGCGTTCGATGCGTATTGGTGTTTTTCTATTCAGGACTGTCTTATGTT # Right flank : TCTAAAGAAACCATCGTGGGGAACAATGGTATTTGTAACGCTAGAATAAAAATGCCAATCCTATCGGATACTCACTGTAAGTCACTTGATCGTAAAAGGGTATTTAGTGAGTGGCGAATTGCCCTCACCTTACGGCGCCACAAGGAGCCTCGTTTTGATATTATTTCTTGCTTTCGCGTATTGCCAGCGTCCTCTCTGAGCACAAAAAAATGTAACGGTATAACATTGCGCAACCGCAAATATACCATGCAATGGTAGCAAACAGGGGGTCAAATCGTGCCATTTTTTTACGCTTTTGCCCATATTTTTGTCACAATTTGACCCCCTCATTAACGCAACAAGGTGATTTTGTGGCTTTAGGGGTCAGAAACGCAGGTTTTAAAAGTTTGTCAAATTTATTTTTTTCACCACAAAAAATACTTTTTTCACTAATAAAACTTCTTTATTGTCCACAAAAATGTTCATTTGCTTTAACAAATAAACGTGATGAACTATAAACT # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:3, 3:0, 4:-0.02, 5:-1.5, 6:0.25, 7:-0.24, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTATACCTTTCAAAATGTGATCTGTAACACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.42%AT] # Reference repeat match prediction: F [matched GTTGTGAGTACCCTTCAAAATGTGATACTTCCCAAC with 85% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 191476-191999 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVBS01000003.1 Sphingobacterium gobiense strain ACCC 05757 ZB100002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================================ ================== 191476 31 77.4 35 .C.CC.AA..........C........C... AACACCAGAGTTCACTCCTTCCGAAAAGTTAACCA G [191479] 191543 31 100.0 35 ............................... AACACCGTCAGTAACGTTATTCTGGCGAACACTTT 191609 31 100.0 35 ............................... AACACCATTCCATGATGCCTGCCACGCCATGATTG 191675 31 100.0 35 ............................... AACACCTGTACCACTTTCCGCCACATTGCCCCGTA 191741 31 100.0 35 ............................... AACACCATTTAGTATTGACAACATAAATAAAGCCT 191807 31 83.9 64 G......C..............A..A...T. GACTCACGCCGACCTCTTGCCGAATATTGACATACAAGGAGTGTACAGTTCCACAAAGACTGAC 191902 31 80.6 35 .A.....C..........T.T......CT.. GACGGCTGTTTTGATATTCAAGGTCGGTTTAGCAG 191968 31 83.9 0 .....................CA.T.AA... | A [191998] ========== ====== ====== ====== =============================== ================================================================ ================== 8 31 90.7 39 AGTTGTGTATACCTTTCAAAATGTGGTTAGT # Left flank : AAATAAACGTGATGAACTATAAACTGATTCGTATTCCAGAAATAGAAACATAATGAACTAACAAAACTTCTTTCTTGTTTACAAAAATGTTCTTTTACTTTAACAAATAAAGGTGATGACATATAAAGCGATTGTTGCTCCAGAAATAGAAACATAATGAACTAACAAAATTTCTTTCTTGTTTATAAAAAATTGCTTTTGGTCTGACAGACAATTCTGTCGGCATGCAAAAACAGCTCTTACCCCTAGAAGTGTAGCGGCAAGACTCTGTTGCGTATACCCATTGCATGGTTATCGGTTAAAGACCAGACGCTTGCAACAGCAAGAAAACTTTAAAATGAAAAGGTATTTAGTGAGTGGTAAATCTCCCTCACCTCACGGCGCCACAAGGAGCCTCGTTGTTGTTTAATAGCTATGCGATACGCCTAGCTTGTATGTTATTCGTTTCATGCTCGGAAGTTTGTATTTTTTAGTTCCTAACTCCTAACCCCTGATTTCTA # Right flank : TAATTACGTAAAGAAAAGGTATTTAGTGAGTGGGAAATGCCCTCACCCTACGGCGCTACAAGGAGCCTCGTTGTTGTTTAATAGCTATGCGATACGCCTAGCTTGTATGTTATTCGCTTCATGCTCGAAAATTTGTATTTTTAGTTTCCTAGTCCCTAACTCCTAATCCCTAAACAGCTTTTCAAAAAATGTGGTCAGTAACACCACTACCCTACGTGTCGCTTTTTCAATTAACGTTGTGCATGCCTTTCAAATTGTTATCTGTGCCCTTCCCTTCTCCTTGTCTCCATCAGGTATCACCACGTTGCGCATACCTTTTTCAATAGCTCAGAAGCATGTGGGCGCAACTTTAGACCTGAGAATCTTTTGACAGCGGACAGCTTTCATTTTTTTTTACTCCCACAATATTATAAATAAATAAAACACCAATACGTCAAAGAACAACGTGATTCCCGATATGGCTATTGCCATAATGAAAGGCATACCCAAGTCACGCCACT # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.54, 5:0, 6:0.25, 7:-0.26, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTGTGTATACCTTTCAAAATGTGGTTAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [8-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //