Array 1 97-3083 **** Predicted by CRISPRDetect 2.4 *** >NZ_VENP01000029.1 Miniimonas arenae strain KCTC 19750 contig29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================= ================== 97 28 100.0 33 ............................ CGCGGTAGCGACGACGCACAACGGCTCCAACTA 158 28 100.0 33 ............................ GTCGCTGGTGATCCCGGCGACGGTTCCGGGGTA 219 28 100.0 33 ............................ CGCCCCGTACCCCGCGCCGGGGTAGAGCACATT 280 28 100.0 33 ............................ GAGGTGGAGCCGCCTGCACGCCCACCGCTGCGT 341 28 100.0 33 ............................ GCGGTTGCCGATGATGCTGATCCCGGACGCGCT 402 28 100.0 33 ............................ CCCCGACTGTCCGGCCGTGCGGGACGCGTTCCT 463 28 100.0 33 ............................ CCTCGGCCTCTACGCCTGGTGGAAGCAGGCGAC 524 28 100.0 33 ............................ CCGGTCCGCGATCAACACCCCGGTCGTCTACTC 585 28 100.0 33 ............................ TTGTGACATCTCGCGGTTGCATCATGCATCCTC 646 28 100.0 33 ............................ GTGTCTCGCCAGGTCCGGTGCGGACATCGGCGC 707 28 100.0 33 ............................ CAGGATCTCGACGATCCCGTCCGCGCCGTCGGA 768 28 100.0 33 ............................ CGCGGCGGCGACGTCGTCGGCCGCTGTGACGAC 829 28 100.0 33 ............................ GCTGTTCCGCCTGCGCTCGTTAGAACTTGCGCG 890 28 100.0 33 ............................ GGACTCCACCGTTCTGGCACACCTGGCCGCCAC 951 28 100.0 33 ............................ GGCCTCCCGCTGAACCTCGCGGCCCGCCTCGTG 1012 28 100.0 33 ............................ CGCCGCGCCCGTCCGCCGCTGGGTCACCCACGA 1073 28 100.0 33 ............................ CCCCCGCAAGATCGCCGGGTCGGAGACGTGGTC 1134 28 100.0 33 ............................ GGCCCGGCAGGGTGCCGGCGGCCTCCCGCTGCG 1195 28 100.0 33 ............................ TTACTCGTCGTGCCCCGAGGGGCGCGACGGGCG 1256 28 100.0 33 ............................ CATCGCCGCGTCGGGGTTCCTCGGGGCGGGCGC 1317 28 100.0 33 ............................ CAGGCCCTCCGGCCCGAACACCGTGCGGAGGGT 1378 28 100.0 33 ............................ GAAGTTGTCCTCCAACGTGACGTTCGACCCGAA 1439 28 100.0 33 ............................ GCGCGTGGAGGCCGCACAGGCCATCGCCGCTGC 1500 28 100.0 33 ............................ GCAAGCGCGACCGTCGGACTACTGGCTAGACGA 1561 28 100.0 33 ............................ CGCGGCGGGGTGGTCGGCGTTCGTGCAGGGGTC 1622 28 100.0 33 ............................ GCAGTCGACCGGGTCTGAGACGAGCGTGCAGTA 1683 28 100.0 33 ............................ CGGACTCCCCACCGAACCCGCACTGCGCGCGCA 1744 28 100.0 33 ............................ CTCCTCACCGCGGTACGCGACCGCACCCTGCCC 1805 28 100.0 33 ............................ GAAGTGCGGCAAGTCGCCATGGGGTGCGGGGAT 1866 28 100.0 33 ............................ GACCACCGTGAACGCCGACCCGGCCGCGATGGG 1927 28 100.0 61 ............................ GCCCTTGATCAGCGCCCCGGCAGCGAGCACCCCGTGCTCCCGCGCCACGCACCCACACCTG 2016 28 100.0 33 ............................ CCCCCATCTCGTCCTCATGCGGTCAGTGTGCCG 2077 28 100.0 33 ............................ GGTGCGCAATCCCGACGGCCTCGCGAGCCGCAC 2138 28 100.0 33 ............................ CGGGGCGCTGGACTTCGGCGAGGCGGCGGTTGA 2199 28 96.4 33 ...........A................ CAGGTGGGGCATTCCCACGTTCGTCATCTCGTG 2260 28 100.0 33 ............................ GCGCGCCGCGACGACCATCGTCTTCGTCTGAGA 2321 28 100.0 33 ............................ CCGTAGCGGTGGGGGGTGACGTCTGCCATGAAG 2382 28 100.0 33 ............................ CGGTTGCCGTCCTCGTACGTCGGAGCGGTGAAC 2443 28 100.0 34 ............................ AGGCCCTCGCACGATGCGAGGGCCCGGATCAGGG 2505 28 100.0 33 ............................ CGCTCGCGCGCCCCTGACGCCGTGCAGCTGCCC 2566 28 100.0 33 ............................ GTCGGCGTCGAGGGGGCGGACGGAGACGATCCG 2627 28 100.0 33 ............................ TCTCGCCGGCGGCCTCACCCGACCGGGCACATC 2688 28 100.0 33 ............................ TGGGTCGAGCGCGGGTCCCCTGCCGACCGGCCC 2749 28 100.0 33 ............................ CCGCCGCGAACTCTACGCGGGGACCTCCAAGGG 2810 28 100.0 33 ............................ GTCGACGCGGGCGTGCACCGGCAGTGGGATCGG 2871 28 100.0 33 ............................ GTCCCGCGCCAGCGGGCTGGACTGCTCCGGCCT 2932 28 92.9 33 A....T...................... CGGTGAGTGCCCGAACGGAAGCATCAGCAGCGC 2993 28 100.0 34 ............................ CAGGTTCGGGGAGAGCGCGAACCGTTGGGAGGGC 3055 28 96.4 0 .................A.......... | T [3080] ========== ====== ====== ====== ============================ ============================================================= ================== 49 28 99.7 34 GTGCTCCCCGCGCGAGCGGGGATGGCCC # Left flank : CCCGTGACCGTCAGTGGGCAGTTCTCATAACCGCCACCGGGCAGCGTCGCGGCCGTCTCCGGGCAGTCTCCCGTGGCCGCTGACACACCCGCTGCCG # Right flank : CCGGCGAGGCGTCACCGCCGGTGTCAAACCCGGGGCTTGACACCGCACACCATGCGGCCGCGGCCGCCGACACGCGCCCCTCGCGCCGCCAGCCCCCCGGCCCCGCCTACTCGACCACGACGACGGGCGAGCTGACCTCGATCGCTCCTTCGCCGTCGGGCACGAGGTTGACGCCGAAGAGCGTCGCGGAACCCGACCTGTGGTGCCGCGCGAGCGCGCGCAGCGGCTGGCGCCCGCGCGCGAGGGTCTCGGGGTCGACGGTCGTCAGCGCGCATCGCGTGCACGGCCCGATCACGCGCATCGGCACGCCGCCGATCACGATCCGCCGCCACGACTCCTCTGCGAACGGCGCGAGCTCGCGGTCGGAGCCCGAGACCACCACGTTCGGCCGGAACCGCCGCATCGGCACGGGCACACGATCCGCGTCGGAGCCGCGCTCGTCCGCCGCGATCCACTCGTTCACCCGCGCCAGCGACGCCGTGCTCGTCAGCAGGATTGGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [21.7-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2040-58 **** Predicted by CRISPRDetect 2.4 *** >NZ_VENP01000050.1 Miniimonas arenae strain KCTC 19750 contig50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 2039 28 100.0 33 ............................ GATGGAGACGGCCCAGCGGAACATTCAGGTCGC 1978 28 100.0 33 ............................ CCTAGTCGCCGGCCTCCCGGTCGATCAGGAGCA 1917 28 100.0 33 ............................ CCTCTCTACATCGAACGACGGAAGTTGAAGCAA 1856 28 100.0 33 ............................ TGGTGTTCTCCGCGGACGCTGTGACCGTCTGAG 1795 28 100.0 33 ............................ CAACAAGTGGCTCGTCGCTGTTGTTGTGGGACT 1734 28 100.0 33 ............................ GCCGCTGTCTACCGCGCAGACTCGCCTCGTGGA 1673 28 100.0 33 ............................ GGGCGGGTTTACTCACTGGTACGGATTCAAGCT 1612 28 100.0 33 ............................ GGGGCTCCTCGCATGACCCGCTGGACTCGCCGC 1551 28 100.0 33 ............................ CGTCGCTGACGCGCGCTCTGAGATGATTAACCC 1490 28 100.0 33 ............................ CACGGCGTCGGCCATCGCAGGCGCCAACGAGTC 1429 28 100.0 33 ............................ GGTGAAGCGGACCAAGAAGGCTGCCGCCGCTGA 1368 28 100.0 33 ............................ CCTCTTGCGCACCAGCTGGACTCCACAGACCCG 1307 28 100.0 33 ............................ GGGGTCGAGGTCGCGGGTCTCGCGGGCGGTGGG 1246 28 100.0 33 ............................ CCGCAGCGAAGCACGGCTTGCACCTCGAGCCAG 1185 28 100.0 33 ............................ CGCCTTCGAGGACCACTCCCGCTGTCCGGCGAG 1124 28 100.0 33 ............................ CAGGTCCGTCGGCCCATCACTGCCGCCCCACCG 1063 28 100.0 33 ............................ CTCGTCGCCCTGCGCGAGCACCCGCAGCACGCG 1002 28 100.0 33 ............................ GCCCAGGTGCCGGACGGCAGCCTGGGCGGGGGT 941 28 100.0 33 ............................ CGCCGACGTCACCCGGGCGCCCGCCAGTGGGGA 880 28 100.0 33 ............................ CGGATGGCGCAACCTCGCATGCCACCGGATCGC 819 28 100.0 33 ............................ GGACGGCGCGAACACCCTCGACGGCGGGGTCGC 758 28 100.0 33 ............................ CCCCGACGCGGCGACGTTGTCCAGGCGAGTGAT 697 28 100.0 33 ............................ CGTGTTCAGGTGCAGCGCGTCGTGGACGTAGGG 636 28 100.0 33 ............................ CGCCTCGTCGGCGCTCTTCGCGACCCCCGTGCG 575 28 100.0 33 ............................ CACTTTCGGGCACCTGGCGATCTCGGACCGACT 514 28 100.0 33 ............................ GCCGGAGACCTCCGCGAGCACGTCATTCAGACC 453 28 100.0 33 ............................ CCGTGTTCGGGAAGCCCAACTTCCACAAGGGCA 392 28 100.0 33 ............................ GTCCTCCACCGTGTCCCCGGCCGACGCCGTGGG 331 28 100.0 33 ............................ GGCCGGCCTCGACGGCGCGCCCGGGGTGCCGCG 270 28 100.0 35 ............................ GCTCGATCGCCTCGTCGCCGTTCCCGCGGCTGAGT 207 28 100.0 33 ............................ CCGGGCGAACGCGTCGTCGAGCTGCGCCTGCGC 146 28 100.0 33 ............................ CCATGCCCGCATGGCGTCGGCGAGGAGGACGAG 85 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =================================== ================== 33 28 100.0 33 GTGCTCCCCGCGCGAGCGGGGATGGCCC # Left flank : CACGAACTATGGGCAGGGCATCGAGGACGAGCTGGTCGACTGGTGATCGTGCTGGTGCTCACCGCTGTCCCGCCTTCCTTGCGTGGCGTGCTCACCCGGTGGCTCATCGAGATCGCGCCCGGAGTCTTCGTGGGAAAGGTCTCCGCGAGGGTGCGCGACCTGCTGTGGGAGCGCGTCGTCGACGGCGTCGGGCGGGGAAGAGCGATCCTCGTTCACTCCGCGAGGAACGAGCAAGGCCTCGACTTCCGTGTCCACAACCACGAGTGGCACACGGTCGACTACGACGGGATCAGCCTGATGCTGCGGCCCCACGACGAACGGCGCGGGGCGGACGCCGCTAGATCGGGCCCTGCATCGCGAGCGTCGGTCCGCGTCGACTCTTCGGCTGCAGGGACCGCCCCCCGAAACTGGAGCTACGCCGAGCGGCGACTGCGGGGTCCGCGCGCTGGGAAGTGATCGCGCGCGGAGCGGCCGCGAAGTAAGGTCGCAGGTCAGCAAGT # Right flank : CGATCGCATCGAACCCCGCCCAGGTGCGGCCCGCGTGCTCCCCGCGCGAGCGGGGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //