Array 1 305689-305979 **** Predicted by CRISPRDetect 2.4 *** >NC_018224.1 Natrinema sp. J7-2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 305689 30 100.0 34 .............................. GAGATCGTCGACGAGGTCCTCGAGATCGGGATTC 305753 30 100.0 35 .............................. GACCAAGACCGACTCGGTCGAGTTGTCGATCGTGA 305818 30 100.0 36 .............................. GACGAGTTGCTTCCGCATCGCGACCGCGTTCAGGAG 305884 30 93.3 36 .......C........G............. AGTGGTAGAAGTACGTTTCAGGCATAATTTGGGCCT 305950 30 93.3 0 .......C........G............. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 97.3 36 GTTTCAGAAGGACCCTTGTAGGGTTGAAGC # Left flank : GCCCCGAACCTGGCCCCGACCGCGGCGGCCTCGTCGGCTTCAACCTCGAGGGCGTCCACGCCCACGACCTCGCCTCGATCATGAACGACCACGCGGTCGCGATCCGCGCGGGCGACCACTGTACCCAGCCGCTCCACGACAAACTGGGCGTCGCGGCCTCGGCTCGCGCCTCGTTCTACGTCTACAACACGAAAGCGGAGATCGACGACCTGGTCGCGGCGATCGACAACGCGCGGCAGTTGTTCGCGTAAGCGAACGCTGACCGCGAGACACGACACGTTCACTGGCGCTCGAGGGCCGTCTCAGCAAGCACCGCGAGCCAAGGTTCGAAGTGGAGTTACCGCTTCGGAGGGATGAGGGAACTGTTCGCGTCCCCACCGCTCGTCTCGGAATTATGGAACGTTCGTCGACCCCCGGGAGGTATTCCAGAAGTAACGGTCGACGAAACGAGTGCCGTTAATCCAAGCGTATTAGATACTGTAGGACCGATATGAAGCATG # Right flank : CAAGGTCTCTCCGGTCAGGCACGTCGGGACCCCTCACGTGCGACGAGGCGACTCGAGCAACGACAAAAAAACGAGTGCTCGGCGGCCCGTTATTCGCGCTCGAGGCTGCCGGGCGGGACGGAACAGCCACAGGCGGAGGCGGTGGCGTCACTGGGACCGGTGACGGTCACGACCCAGACGGGACGGCCGCAGGCGGGGCAGTCGGAAAGCGACCAGTCGGTCGCGTCAGCCGCCTCATCGGCCGGCTCCGTCCTCGTACTGGCCGGATCGACCCGCTCGTCGTGACCGGTCATCGCGACCGCCGTGGCCGCTGCGGCCGGTCCCGAGCATCGGGCGCTGTCGCTGGTCGGTGGTGTTGATTCCATCGTCGTGCGGGACGTTTATATCACGGTAGAATGTACGCAATCATGCTTGCAACTTCCTCGGTGGGGATTGGAAGCCAGTCTCGGGTGCTCTGACACCCGGGGCATTATCGATACGTGACCCCTCCGATCGCGCGT # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGACCCTTGTAGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.60,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 842751-845139 **** Predicted by CRISPRDetect 2.4 *** >NC_018224.1 Natrinema sp. J7-2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 842751 30 100.0 34 .............................. CAGGCGTGGCGCGTTCGCAAGCGAGCTGGGCTCG 842815 30 100.0 34 .............................. GTGAGCCATCCGAGCACCAAGACCCCCATCGAGA 842879 30 100.0 35 .............................. TCGCTCCAGATTTCGGGAGCGACATAGAGTTTCCG 842944 30 100.0 37 .............................. GACATACGCCTGCTCGTGTCCTTCCGGTTTGTCGTCG 843011 30 100.0 37 .............................. CCGAACCGCTCGCGCTGGCGCTGGCTGTGGCTCATGG 843078 30 100.0 34 .............................. TCCTCGCGGTACGCGGCCAGGTGAGCCGCCGCGA 843142 30 100.0 36 .............................. TGTACCAGCAGTACCCGGCTGTCTCGACCCACGGCG 843208 30 100.0 36 .............................. TCGAGGGCCTCGCGGGCGGTGTGGCCGCCCTCTCCG 843274 30 100.0 35 .............................. TGGCCGTCTGCGCCAGTCCCCGAGGCGTTCGTCGA 843339 30 100.0 35 .............................. ATTGATCGGACCTCCGGGTTACTTGTAGGCAATCA 843404 30 100.0 35 .............................. GAATCCTCGAGGATCGGCGGCCAGCTGGCTGAACA 843469 30 100.0 35 .............................. GCAGACTACATCCTCGCCTGGCGGTTCCTCGACGC 843534 30 100.0 37 .............................. GGTTCGAGCTCCGGGTTGGTAGGGTCCTCGAGGTCAT 843601 30 100.0 36 .............................. GCCCTTCGAGAGTAGACCAGTCACGCTTGATTTGAC 843667 30 100.0 34 .............................. ATCGATGTCACCCTCGCGATCAAGAGTCGAATTG 843731 30 100.0 33 .............................. ACGTCGTCACCGCCGACGGGACGAACACGGTCG 843794 30 100.0 35 .............................. GTGCGTCATGATCTAGCTGCGTACGGGGCCACCCC 843859 30 100.0 35 .............................. CGCTGCGCCGCCGCCACCGCCACCACCTTCTCCGA 843924 30 100.0 35 .............................. GCGTTAGACTCCTCGACGCTGGTAAAAGTCTACGG 843989 30 100.0 35 .............................. AGAATGTATGACTCCTACCCGATATCGGAGGCTAT 844054 30 100.0 36 .............................. AGGAGACGGAGAACGCCTCTACTTTCGCGGAGACTC 844120 30 100.0 37 .............................. CCGGGAAACAGACGCATGTCACCGGATGAAAGAGGAA 844187 30 100.0 35 .............................. CTCGACAGGAACCCCTCGTAAACAACGATATACAG 844252 30 100.0 35 .............................. ACGGTAAGCTACAGGAGGGAAAAGAGAACGTCCCA 844317 30 100.0 35 .............................. GGAGTCTCCCGGACGAGTATCAGGAAGGGCTACAA 844382 30 100.0 36 .............................. AGACACAGACATGGGAGACGAAACCCCCGAAGGCGA 844448 30 100.0 36 .............................. ACAGGTCGAGTCAATTTTATCGCCATTCGGAAATCC 844514 30 100.0 33 .............................. CGGCTATCATCACTTCGCTGTCCGACTGACCGG 844577 30 100.0 37 .............................. GCGAACGATACGTCGCCCAACTCGAGGTGTCAGGCAC 844644 30 100.0 36 .............................. GATCACACCAAACGTGAATTGGACGCGGTCACGCTG 844710 30 100.0 36 .............................. TGTCTGTGGGTACTGCGGTGCGCAGGCCGAGCTTGC 844776 30 100.0 37 .............................. CGCTGTGGCGTCGCCGCGGATGTGCAACGACGCGATC 844843 30 100.0 37 .............................. TACGAGCAGGATGATGAGCAGGATGACGAATAGACGA 844910 30 100.0 37 .............................. TGCCCCGACTGCGAAACGTGGGTCGGATGGAAGCGCG 844977 30 100.0 37 .............................. GAGCAGATCAATCAGCAGGCCCAGACCGTCCAAGACA 845044 30 100.0 36 .............................. CTGGCGCGGTGCGTCGGGAGAACGGTATCGACCTGA 845110 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ===================================== ================== 37 30 99.9 36 GTTACAGACGGACCCTTGTGGGGTCGAAGC # Left flank : TCGACCATCCGGACTTAGGAAAAAAGGTAAGCTACCAGTATCTCCTCCGTGTCGAAGCGTACAAACTGAAAAAACATCTCCTGACCGGCGAGGAATACGTCCCGTTCCGACGGTGGTGGTGAGTGTGGTCTACATCGTTGTGGTCTACGACATGGAAGCCGACCGGACCCACAAGATGCTGAAGTTCCTTCGGAGATATCTCACACACGTCCAAAACTCCGTGCTCGAGGGGGACGTGACTGAGGGCGACCTCGAAAAGATCCGATCCGGCGTCAATGAAGTGCTCAAACCCGGAGAGTCGACGATTATCTACCGCGTCTCCTCTGAGAAGATGGTCGAGAGAACCGTCTTTGGTGACGATCCTGCTGCCGATGATCAGTTCCTCTAACCGTCCCCGGTTGTTTCATCGACCCCAGGGGGTTCAGAGGTTATCGAGGGTCGACGGAAACGATGAAGTGTGAACGGCCAATAGAGCTGTTTACGTGGTCTGACTGGCCATG # Right flank : ACTCTATAAGAAGGAAAATAGGAACAGATTTGCGGTCAACTCTACTCGTGCCGATCAATTGACGATCTCCACGACACCCGACCAACTTGGCCGGTCAGAGACGTTGGAATATTTGATCTCTTCAGAACCTAATACGGCCATTTCAGTCGGTTGAAAAGACTGTTTAGCCGATGTAAGGGGAACAGTATCCGATACCAAAATCCGGTTTCGACTGATGTTTGGGTAAACCCCAAACAACTGTCGGTTCCATTGGAACCATCCCCGACTATTTCGACCCGGCTCAATAGATGATAAACCGCTGTTCATACACAAACTGGAGACGGCCGTTTCGCCCGGCGAAAAAAGACGGTTTAGCTGATAAAAGGGACGACAGCGTTCAACACCAAAGGAGATCTCGGCCGACATTCGGGAAGCCCCGCCCAACTACCAGTATCAGTGGGTTAGTCCCGACTACGTCGAGGAGTTCCTAATCGCCCTCCGTGATGGAAACGTTGGCCGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGACGGACCCTTGTGGGGTCGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 2861125-2862408 **** Predicted by CRISPRDetect 2.4 *** >NC_018224.1 Natrinema sp. J7-2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2861125 30 100.0 35 .............................. AACAGATGCACAGAACCGGGAAAGTGAGTGACACC 2861190 30 100.0 36 .............................. TGCTACTGTCACGCCGACTGACAAAGTTTTAAGTCC 2861256 30 100.0 36 .............................. GTGGTCCCAACAGTCGGCCACAGCTCCGAGGAACCC 2861322 30 100.0 35 .............................. CAGACCGAGCGGGCCGGTCTCGAGACCGCACTCGA 2861387 30 100.0 34 .............................. TCGAGTGAGTCACCGCAGCGATCGCATGATCCGT 2861451 30 100.0 35 .............................. GAAGTCGGATGGAGGGGAGAGTCGGCGTCGGTCTC 2861516 30 100.0 36 .............................. TCCGGCATGAACGCGAACCTCGGACCGCTACTCCGG 2861582 30 100.0 38 .............................. GTCGTCATCCTCGTCGCTGTCGTCGGCCTTGGAGATGA 2861650 30 100.0 36 .............................. GAGGGAAATCGAATCGGGATCGATCCCATCCGGGAG 2861716 30 100.0 38 .............................. TTTTCCATCCGGCTGCGTGGCGTCGCGAGCGATTCGGC 2861784 30 100.0 37 .............................. GACTGCCGCTTTGCGATTTGGCTGACGCGCTCGTCCG 2861851 30 100.0 36 .............................. TGAACCGTCCGCGTCACCCTCGCGCTCGAGCATGGC 2861917 30 100.0 36 .............................. TCGGACGTGTTGCTTGCGTAGTCCCATCTACACACG 2861983 30 100.0 37 .............................. GACTGCCGCTTTGCGATTTGGCTGACGCGCTCGTCCG 2862050 30 100.0 37 .............................. GACGTTGAGGAAGTCCTTGATACGCCCGGCGATGAAA 2862117 30 100.0 36 .............................. CATCCAGCGGTCGACTTTGTCGTGCATCCGGGCGAT 2862183 30 100.0 35 .............................. CTCCGACTCCGCCGCCTCGATAGAAGCACGCACTT 2862248 30 96.7 36 .............................G ATGAATATGGGGACTCGAGAGACTCACCCTGATCGC 2862314 30 93.3 35 ..........G..................G GCCGACGAGTTCGAGGCGTTCGTCGACGCCGGCGA 2862379 30 96.7 0 ..........G................... | ========== ====== ====== ====== ============================== ====================================== ================== 20 30 99.3 36 GTTTCAGACGAACCCTTGTGGGGTCGAAGC # Left flank : GGTGATCCGACTTAATGACAAGCAGTATTGGCCGTACGCTGCGGTCGACCCTGAGATAAACAAATTATTCTATACAATGCTTGAGCCAACGACAACGAAGGTCCTCGCCCATTCGTTTCTGACTGAACTCTCTGAGAAACACGACATCGATGATGCCGTATTTTTCGTCGATGGATCGCATTCGTTACAAGATGCGTGTCAGCGCAACGGCTTCGATTTCAGATACGAGAAACATGGAAATCGGAATGCTGTCAAAAGCATCTTTAAATTGACGGGTAGCAGAACTGTATAATTTCCAAACTGTTTTAGCAACGCCGCAGCAGAAACCGACGACAAGTGGATCAGATCGTTCAGCTTCGCATGGAATCAGCTTATCTGAATACTACCGAGTGAGGGCAGCTACTCATCGACCCCCGGGGGTAGACGGGCTACTGGAGGTCGACGGAAGGACTTTATTGAGAGCGTGCTATACAGAGGCTGTAGCCCAGAAATCAGGCATG # Right flank : CGGGCCCGAAGAACGAGCCTGGTGTCTCATACGCGAAGTGTTTCAGATGGCCCCTTCTTTTACAATAGCTGAAAGGGTTAGCACACCCCCAGAAAAAGCAGCCCCATCACGACAAATGTGAGAAACGTCTAATCAGAAGAGAGGGCATCGCCACCTCCGATCGACACGTTTCCTACGGGCGTATCAAGCTTGACATCTGCTTCGAAATTCGCAATAACTACTGCTGCTGCAAGAAACTCTACGAACTTTTGGTTCCGATGAAACAACGCCTCACTCATTACTAAATAGCTTAGGCACAGACCGTCTCGCATATCCGAAGAACAGTAATTCAACAGCAAAAAAGAGGGCAAATGAGACAGTCCCTGCGATCAATGAGAGAGCAAACCCAACAGCAGCTACACCAGTCATCGCGGTTACTATAGCCCTGAAGATAGACTCCAGAATCTCGAGTTTCACCGGGTAAGTGGCAGCTGTGTCGGTTACCATCTCTTGTTCTGTTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTTGTGGGGTCGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.50,-5.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //