Array 1 62-744 **** Predicted by CRISPRDetect 2.4 *** >NZ_FKIP01001100.1 Candidatus Entotheonella palauensis isolate egemina21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 62 36 100.0 37 .................................... TCTGTTGACCGTAGTCATAGCGAATCCATTGCTGTTC 135 36 100.0 35 .................................... CGTGTTGCGTTTGCTATGGAGGCGTCGGATCCTTC 206 36 100.0 37 .................................... TAAGATTAAAGGTATAATCTCCGCTCACACATTCATC 279 36 100.0 37 .................................... GTGAAGATAAGCGCGAGGAGAGTAAGTGTCCCTACCA 352 36 100.0 36 .................................... CTCCTCTTGCCGATCGTTCTCCTCGGCAACAATTGT 424 36 100.0 35 .................................... CCTTTCTCGTGTTTGAATGACTCCACTTGTCTTAA 495 36 100.0 37 .................................... CCATTAATTGCGAGATCAAATGCAAAGTTATCCGGTT 568 36 100.0 33 .................................... CTTCAAAGTCGATGTCGGGGCGTTTGATGTTTT 637 36 100.0 36 .................................... CAATGACTTCCCAAGTTTTAGAATTCTTCTTATACG 709 36 75.0 0 ..........G.AG....C...A....A...C.TG. | ========== ====== ====== ====== ==================================== ===================================== ================== 10 36 97.5 36 GTTGCAGGACTAGACCCGATTCGAGGGGATTGAGAC # Left flank : TATGGGCAAAAACTGAGTCATCCTCCCGTACGACGGAAAAGATGCTCTTCGTTTGCTACCAG # Right flank : CCACCAAACCTCAACTAGCAGGGTAGCCCTGAGTACCTCCCCACGAAATCTTCATGAATTCCCCACGAAATCTTCAGGTTCGCTCTCTTCTCAATCCATCCGTTTTCAATTAAGATCAAGACTCTCGTTAGCCATGCCCGAAAACCAGGCATGGCCAGAACACCTGAGACCCCCGCTTTGATGACAGGAACATCGTCCCATGACCGAGCCGACCGTCACCTTCGACGCCAGTGCAACCGCCATTGATCACTTTCGCCTCCTGTATTGCCGCTTTACCCTTAAAGCGACAACCCCGCTCCATCTGCCGCCTTACAAAGGGTCAGCCTTCCGAGGCGGCTTTGGCCATGCGCTGAAACAGATGGCCTGCACAGCGCCGGAAAAGATTTGCGATACCTGTGAGCAGCCGAATCGCTGCATCTATGCGTATCTCTTTGAAACGAAAATCGAGCAGACAGGCGCGAATGAAGAAATGATCCCTCGCCCCTTTGTACTCGTACCCC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGGACTAGACCCGATTCGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 4745-4045 **** Predicted by CRISPRDetect 2.4 *** >NZ_FKIP01000057.1 Candidatus Entotheonella palauensis isolate egemina21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4744 29 96.6 32 ............................C ACCTTACGACCGCACGCAGCGCCACCCGGAGC 4683 29 100.0 32 ............................. CGTGTTTTGCTGGAACAACGACAGCGCCGACC 4622 29 100.0 32 ............................. CCTTTGAGGGTTTTGGGGGGTGCATCGTTGGC 4561 29 100.0 32 ............................. TCCATGTCCGTGTCCTCAGACGTGATTGGAGC 4500 29 100.0 32 ............................. CCCCATCTGCTCGTAGGGATCATACGAAGCAA 4439 29 100.0 32 ............................. TGGCCGCTTGAATGGTCGGGTCTTTGAGTAAA 4378 29 100.0 32 ............................. TTCGCCGGCAACAACCCCAATCGCCCAGCATA 4317 29 100.0 32 ............................. CCCTATTTCGCCTGCCTGCCGATCGGCACAGA 4256 29 100.0 32 ............................. GTTTCTGTTTCGAGTTCAAACGTGTGGGGATC 4195 29 100.0 32 ............................. ACCTGCACCTGCCGTGATTTTACAAACCAGAA 4134 29 100.0 32 ............................. ATTTTGCCCCCGCCCGCCCACCGCTGCCCCCA 4073 29 89.7 0 ........T...G...............C | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.9 32 GTGTTCCCCACGTGTGTGGGGATGAACCG # Left flank : TTGAGATGGCTGAGATTTGTGCGGTTCGTCCCCTGTATTTTCGCAAGAGGGGCAAGGCTGGCAAGGTGGTGATGGTGACGTTTGATGGCGTCTTACACGTTCATGATCCCGGCCGGCTTTGGCAATGCATGCAAGATGGCATTGGACCTGCTAAGGGGTTTGGCTGTGGGTTGTTGTCGATTGCCACGGCATAAAGGGAGCTGCGCGTTGTGATGTTACCGCCGCTGAAGCCGATCGCGATGAAAGAGCGTGTGTCGATGGTATTGGAGATGGCCATGCCGTTATGGTTTGGAGTACCAATACGGAGTCGGGGTTTGATTCGTGACGCTTGGTACGAATCGGCGAACGCGGGTGGAGATGGATGGTCTGAAGCTCGTGTCGTTTTTTCTTTCTTCCGGGGGTGAAACTCATGGGTGCTGACCGTAGAGCGAAGCGGTGTTTTTGCTGGTAGAATTTTTGGTGTGTGATAAAGTATTTGTTTACAATTAGTTGTGAACAGT # Right flank : TCTTCAGGCAGAGCCTCATTGAGGCGATTGACCTGGCCGGTGACTTACCGAGCCGTCTAACCTCTGGGTGGTCAAGCAACTCCGGGAAGTCTTGCCGATTGGGCAGAGGCGCGTTGAGGGTGATCTGGTGGTGATTAATCTCTATGAGACGCAGGAAGCGCAGTACCGGGGGCAGGCGAACACAGGTTAACAGTCATCCCAATCGTTATCATCATCATCACACGGATAGCTCGTGGCACGCACCCGTATCCCAAAGCGCCTATATAACGCCTCCGCAATGCCCGGCGTGATGAGGTCCTGGGTCAGTGCCCGTGCGGGGGTTCTGTGCGAAAAACCGATCTGCTCCGCCATCCACTCCACGGAATACCCGTGTTGATGAGCCCATTGTAACACCCGCCGTCCTTCAGCCATGGTTGCTTCACCTATGAATCAAAGGGAGATCGCAAACTGCGAGAGGCGCCAGGATACAGAATTTACCACCAGGACACAACTCACACGAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //