Array 1 1357381-1356813 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084031.1 Aeromonas caviae strain K433 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1357380 28 100.0 32 ............................ GCCAGGGTGCAGCTTGGTGAGGCTATTGAGCC 1357320 28 100.0 32 ............................ TGTCTGCACGGCAAAAAAGCCGGCTGGATGAC 1357260 28 100.0 32 ............................ GGTATCCGGCGGGCCAGGGTGAACACGTCATT 1357200 28 100.0 32 ............................ TTTGATGTCGCGCATCACGCCATCGAACGCCT 1357140 28 100.0 32 ............................ ACTGGTGCCAACCTGTCTCGCCTATCCAAGAA 1357080 28 100.0 32 ............................ ATGAACAACACTTTGAAATGGGGTGTGATTTC 1357020 28 100.0 32 ............................ AACGTCAGCCTCGGAGATCAGGTGCTGGCCAT 1356960 28 100.0 32 ............................ GCAGTCGTAATAGCCGAACTCTATGACGTTGC 1356900 28 100.0 32 ............................ TGGATAAACCACGCGATGGTCTGGTCGTTCAC 1356840 28 82.1 0 ..................TCA....TT. | ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.2 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : GCGGTGTCGTGCGTCGCCATCACATGTATGACCAGACCTTTCAGCGCGCCTTCAAACGTGCCGTAGAACAAGCAGGCATCACGAAGCCCGCCACACCGCACACCCTCCGCCACTCGTTCGCGACGGCCTTGCTCCGCAGCGGTTACGACATTCGAACCGTGCAGGATCTGCTCGGCCATTCCGACGTCTCTACGACGATGATTTACACGCATGTGCTGAAAGTTGGCGGTGCCGGAGTGCGCTCACCGCTTGATGCGCTGCCGCCCCTCACTAGTGAGAGGTAGGGCAGCGCAAGTCAATCCTGGCGGATTCACTACCCCTGCGCGAAGGCCATCGGTGCCGCATCGAACGGCCGGTTGCGGAAAGTCCTCCCTGCGTCCGCTGATGGCCGGCAGCAGCCCGTCGTTGCCTGATGGATCCAACCCCTCCGCTGCTATAGTGCAGTCGGCTTCTGACGTTCAGTGCAGCCGTCTTCTGAAAACGACAGCGATGGTGGACAT # Right flank : CTGGTTGCAGCTAAACCGGAAGGGCCGCTGACTGCAGGTTCATTCCACTCCAAGATCAGTGCAATGCTGGTTATTGAGCTACTGGGTCAACAGCTATTGGAAAATAGGCCAGAGCTGGCGGGAGCTATCTCGGATAGTGCCAAGGCTACGTTGCCTTGGTTGATACAATCGCTAGCGAGGGGAGCATCATCAATACTTGGACACCAGACTGGATCGATGTCCAATGTAATCCATCCGGGTAGTATGTCAGCCAACATCAAATGGCACACTGAGTGGCATACCACAAAAATATAAAAAATTAAAAACCCAACCTAATCAATAGGTTGGGTTTGGTATGTGGCGGAGAGACAGGGATTCGAACCCTGGGTGGCATTGCTGCCACAATTGATTTCGAGTCAATCCCGTTCGGCCACTCCGGCATCTCTCCACGGGCACTCATATTGACCCAACCCTAGCCGGGAAATCAATGTAAATCTCGTTGCAGATCAGACGACTGGCGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1392293-1389265 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084031.1 Aeromonas caviae strain K433 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1392292 28 100.0 32 ............................ ATCTGCCGTCAGCGATCACCTTCATCGCCTCG 1392232 28 100.0 32 ............................ GCCAGGGCTGGTGATGTGATGACGGTTGTCAG 1392172 28 100.0 32 ............................ GGTCGAACCTGCCGTACCGGCAGAGATGCCGA 1392112 28 100.0 32 ............................ AGCCCGCGACTATCACGGAACCCCTCGGCAAA 1392052 28 100.0 32 ............................ ACCTACCTTGATAACTTTAAGGTCAAGTGGGC 1391992 28 100.0 32 ............................ TAGTTATCCACTCCATGGGCATGAACGAGAGC 1391932 28 100.0 32 ............................ GGGGCGGCCATCAACCACACACTTACCAACGA 1391872 28 100.0 32 ............................ TGGCAGAGCGTGATCCCGAACATGATCCAGCT 1391812 28 100.0 32 ............................ ACCGATGGGGCCACCGAACGACGCCAGGGCGT 1391752 28 100.0 32 ............................ TCAGCGAACGTCGACCCGGACATCATCATCTC 1391692 28 100.0 32 ............................ TGGGGTGGCTACCGCGACCACCGCGACCACCG 1391632 28 100.0 32 ............................ GACAACCAAGACCGACCCTTTCGAAGGAAACA 1391572 28 100.0 32 ............................ AGGATGACCCCATGGCCCAAGCCATGGTGGCG 1391512 28 100.0 32 ............................ TGGGAAATCGAAGTGCGGGGCAACATCCAGGT 1391452 28 100.0 32 ............................ GACCTGCGCTATGTCCTGCTGACCGATGACTC 1391392 28 100.0 32 ............................ TTGGCGGCCTGTTGCGGCATAGGCGGCAAAGA 1391332 28 100.0 32 ............................ TCGACGGGGCTTAGTGTGATCTGCCGGGATAT 1391272 28 100.0 32 ............................ AGCACCCGAGTGGATGTGCTCGACGAGGTGAC 1391212 28 100.0 32 ............................ ATGCTGACCCACATCATGGTCAAACTGAAAGA 1391152 28 100.0 32 ............................ ATCATCGGATCCGGTTGCTGGGCCTGAGCCTG 1391092 28 100.0 32 ............................ AATGGCGATGGAAAGCTGTCAGCGGAAGAGGC 1391032 28 100.0 32 ............................ ATATCCAGGTACAACTTGAACTCTCCAACATC 1390972 28 100.0 32 ............................ CAGCTCATGGATGGGCAGGTCGGGCGGACATC 1390912 28 100.0 32 ............................ CCGACGAGCCCGAGCTGGTCGCCGCTGCGCAA 1390852 28 100.0 32 ............................ AGATTGGCAAATCCGCATCATCACCACCATTC 1390792 28 100.0 32 ............................ TACCTGAAATTCAGTGAGCCGGGTATGGGGTC 1390732 28 100.0 32 ............................ AAGAAAAGCACCGACAGTACCGAAAGCACCTC 1390672 28 100.0 32 ............................ AATAAAAGCAATCTGGAGCGCGACCTCGATAA 1390612 28 100.0 32 ............................ GGTACCGTCGCGAAAGCGGCCACCCCGGTTGC 1390552 28 100.0 32 ............................ ATCATCGGGTAGGGCTCGTCGTAGGCCGTCAC 1390492 28 100.0 32 ............................ GGTAACAAGCAGGTTGCGGGGGAATACGCCAT 1390432 28 100.0 32 ............................ GGCAGCACTCCGGTCACGCAGATCATTGTCCC 1390372 28 100.0 32 ............................ TGTCGGGCATGACGTGGAACGGTAACCGCCTG 1390312 28 100.0 32 ............................ AGGAAGAGCAGCAGGAAGAAGCCGCATCCGCA 1390252 28 100.0 32 ............................ ATGACGGGCACCGTACCGGATTTCTTGCAGGA 1390192 28 100.0 32 ............................ TGACCGCGCAGTACAGCGCCGCCCTGCTGGCC 1390132 28 100.0 32 ............................ CAGAGCGCCAATGAGCGAGCTACCTGGGAGGC 1390072 28 100.0 32 ............................ AGTAAGATAGACGGTAGAGACAAAGGGGCTTC 1390012 28 100.0 32 ............................ GGCAGGATCGCCACGCCGTCGCGGAACTCCAC 1389952 28 100.0 32 ............................ TGCAGGACCGTGGCTACAGCGTCAAGTTGATG 1389892 28 100.0 32 ............................ GGGATCGACATCGAGCTTGGCAAGGCTGTGCT 1389832 28 100.0 32 ............................ CCGACGCGATCCCGCCTGTGGATCAAGCCTAT 1389772 28 100.0 32 ............................ AGCTGCGGGAACTGGGCCTTGATGTCGGCCAC 1389712 28 100.0 32 ............................ TGTCGGGCATGACGTGGAACGGTAACCGCCTG 1389652 28 100.0 32 ............................ TACTACGCCAAGGGCAACTTCACCTACAACCT 1389592 28 100.0 32 ............................ TCGAAAAAGAACTACTGTCCTGTTACCAACCA 1389532 28 100.0 32 ............................ AATGGAGAAAATCGTCATGGCACCAAGAAAAG 1389472 28 100.0 32 ............................ AGTGACTCCACGGCCTGTTTAATTGTGTTCAT 1389412 28 100.0 32 ............................ ACATTGGTGATGCCTGCCGCTGCGATCTTCCC 1389352 28 100.0 32 ............................ AGGAACGCATTACCTCCTGCGCCGATGTTGTG 1389292 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 51 28 100.0 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : TGGCCGAACTGCTTAACCTTACCGAGGTGAACTGGTTGCAGGGGATGCGGGACTATATCCAGCTCGGCGAACCAGAACCCGTTCCTCAGGGAGCCAGCTTTCGTGTGGTAAGGCGGGTGCAGGCCAAGAGCGCTCACAACAAGCGTCGCCGCTCGGTGGCCAAAGGCTGGTTGAGCGAAGAGGAGGCGCAGGTTCGCATCCCCGATGCTCAGCAGAAGGCGATGTCTCTGCCTTATGCCGAAATGCACAGCCTCTCGACCCAAAGCCGGATGCGCCTCTATATCGAACACGGCCCTCTGCTCGATAAGCCTGTCGCCGGGATGTTTAACGCCTATGGGCTAAGCACCACAGCCACCATCCCCTGGTTCTGACCCTCTTTTTCAGGGCGTAGCTAACTCATTGATTTTTCAATGTCTGTTACGCCCTGATAAAAATAGGGTTCAGTGACGGATTTGGGGTAAGTTCTTTAACAATCAATTAGATAGCACTAATATGTAACA # Right flank : TCTGGCTGGCCGCGCTCGGCGATTGTCATTTTCAGAAGACGACTGCACCAGTTGATTGGGCGTAATGGCTGTTGTGCAGCCAGCTCCTGACAGTTCAATATCAGAAGTGATCTGCACCAATCTCGACTATGCTCAATACTCGTGTGCACCAAAGCGAGGTGAGCATGGCGACGGAGGCTCTGTTGCAAAGATTGGCGGCAGTCAGAGGTAGGCTGTCGCTCTGCGCCGATCAGGCGGCTGCTGCGAAATGGTGGTTGAGCATGCCCATGGCCTCCGTCAGCGCCGAGGGCCCAATGCCAAAAGCTCTCTCCACAAGGCGCACCTCGCCCCTGATGCCGGGCTGCAGGCACCAGGGGCGAGCCTGTCCTTTGCGCAGGGCTCGCATGACTTCGAATCCCTTGATCGTGGCATAGGCCGTGGGGATCGATTTGAAACCGCGCACCGGCTTGATCAGTATCTTGAGCTTTCCGTGATCGGCCTCGATCACGTTATTGAGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //