Array 1 96709-97207 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJZO01000071.1 Campylobacter jejuni strain BCW_6954 327, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 96709 36 97.2 30 A................................... ACTTTTTCACAATATGGTAAAGTAGTTGTA 96775 36 100.0 30 .................................... TTATTAAATGTTAGATTATAATTCTTGGCA 96841 36 100.0 30 .................................... AATCCTAATAATTTAACAGCAGGCATTCTA 96907 36 100.0 31 .................................... TTGCTTAACATTATAAACGTGGTCTCTTATT 96974 36 100.0 30 .................................... TGGAGCTACTTCTGTGGATATAAGTATAGA 97040 36 100.0 30 .................................... ACTGCTATAAGAGGAGCTACTGGTCAAGAA 97106 36 100.0 30 .................................... TATTATGATGAGAGATTAAAGAAGTTTATC 97172 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 8 36 99.7 30 GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : ATAAAACCAGGCAGACATATCAAAATAGCCAAGGCTAATGAAAAATTCATCATTGCCTTACCAGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTACGCAAGAGAGATTTTAAACTCTTGGTTACTTCAGCCTAAAGACTATATTTGCAAAGCCTTTTTACAAGGAAGTTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGCAACATAAAGTTTGAAAATGGACGCATTTTAGCCAATCTTGAAGGCAAAAAAGAAGGCTCTAGTGCGATTATAAACAATCTTAACAATAAAGCTGCCCTTATGGTGGTGCCAAAAGAATGTGAAATTTTAGAAAATGAAAGTTTAGTGGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTCGCAACCTCCTTTTAGTGGAGTAATTAGCCCTAGCGGAGTTTCAATCCACTAGGGTTT # Right flank : | # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //