Array 1 10450-9424 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_APUS01000116.1 Neisseria meningitidis NM90 gnm90.contig.115, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     10449	    36	 100.0	    30	....................................	GCCTCACAAATATCGTCAATGCTTGCGCGA	
     10383	    36	 100.0	    30	....................................	TGCCACTTGATGTTTTAGCCATAGTGTTCT	
     10317	    36	 100.0	    30	....................................	TGCGAAGCGAACACCCTGAACAATGCCGAC	
     10251	    36	 100.0	    30	....................................	CCGCAAAGCAGCCGAAAAAGCCGACAGGAA	
     10185	    36	 100.0	    30	....................................	CATGCCGTCGGGCGGTGTTGTAAATTTTAA	
     10119	    36	 100.0	    30	....................................	TGACAAATAAAGCACGATTGTTGCAAAAGG	
     10053	    36	 100.0	    30	....................................	CCAACGGATAAAATTACGCCCAAGCACCTG	
      9987	    36	 100.0	    30	....................................	GTATTGAGCGTCAAGTACTCGCCATTCGAG	
      9921	    36	 100.0	    30	....................................	TGAAGGTTCGATAATTCGACCTGAAAAACG	
      9855	    36	 100.0	    30	....................................	TCACTCTAAAAATCCGATTCTACCACCGCT	
      9789	    36	 100.0	    30	....................................	TTGGCTCGTCTGCTGCCGTCAATCGTGCGC	
      9723	    36	 100.0	    30	....................................	TAGATTGCCTCATATACGCCGAGCGGGTAG	
      9657	    36	 100.0	    30	....................................	CAGGTCGTGCTGGAGCAGGCCGACGATTTT	
      9591	    36	 100.0	    30	....................................	CATACAGTTCATCTTCACCTGCAATCAGGG	
      9525	    36	 100.0	    30	....................................	CACGAAACCCATGATTACATTCGCTACTTG	
      9459	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        16	    36	 100.0	    30	GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   ATTTCGCAGTGCTACAATACGGCGGTGGAAACGGTTTTCATAAAATT
# Right flank :  ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGCTGGAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATCGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACACCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//