Array 1 240665-241920 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJCH01000005.1 Legionella pneumophila strain 2531STDY5467385, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 240665 36 100.0 36 .................................... AATATCTGGCTCATAATCAACGATTGCAGAAACAAT 240737 36 100.0 37 .................................... ACGCAATACTTCGCGGTATATCTGAAAATACCATCAA 240810 36 100.0 36 .................................... ACGCCGATTCGTATAAAAAAGGCTATCATATTCAAG 240882 36 100.0 37 .................................... ATTTTACATTTCCTTATTTAAATTAAAAATCCATTAA 240955 36 100.0 35 .................................... AGAATAACTTTGTTCATGAATGTGGTGAATGGTGT 241026 36 100.0 39 .................................... ATGTAACTAAATTTGAAACAGGCGTTCCCGCTCTTTTAG 241101 36 100.0 34 .................................... ACTCTCAATTTTACATGTCGTCCAAAAATGTAAA 241171 36 100.0 35 .................................... AAATTTGAAGAGGCGCACCAGATAGGCGAAATGGA 241242 36 100.0 34 .................................... ACTTGTAGACGGCACGATCGAGTATTGGTATGAG 241312 36 100.0 34 .................................... ACTCATATTTCAACCCAGTTCGTCGAATCGTAAG 241382 36 100.0 37 .................................... CTTTTCATAACAATCTCACAATGTAAACCAAACTTTA 241455 36 100.0 35 .................................... CATATCTCGTCAGCTATATGTGACCATTTTTTAGC 241526 36 100.0 36 .................................... CAGTCAAGTGACTTGCTATTTATTAACCTTAATTAA 241598 36 100.0 34 .................................... CTGTTTGTACGGAGATGGTATGTTGGCTTTGGTA 241668 36 100.0 35 .................................... CACTTTTGATGTGTTATTTCAGTGAATTTATCGCT 241739 36 100.0 35 .................................... CCTTTGAGTAGATTTTAAATCAACAACCATGTGAG 241810 36 100.0 39 .................................... CTTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 241885 36 88.9 0 .......................TT...T.A..... | ========== ====== ====== ====== ==================================== ======================================= ================== 18 36 99.4 36 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAA # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTACTTGAAATTTGTGGTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : ATACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //