Array 1 9716-9350 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXKD01000027.1 Streptobacillus moniliformis strain NCTC 11941 contig_52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 9715 36 100.0 30 .................................... ATTCTGACTTTTTGCTTGTCTCTAATGCCT 9649 36 100.0 30 .................................... ACATTTATGAAATTAAAAGAGGAAAGAGAA 9583 36 100.0 30 .................................... CTTGTGTTATCTTAAAATCATAAGGACTAT 9517 36 97.2 30 .......C............................ ATAACTTATTTGATAAACAATCTTACCATG 9451 36 100.0 30 .................................... TTTTTTAAAAAAAAAGGCTTAAAAATCTGA 9385 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 95.8 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : TGGTAAATTTGAATAATGTGAATGAAGTGGGGGTTGAAATAAATAGTGAAACAGGATACAGATTCTTGGTAAATTTGAATAATGTGAATGTTGATTGGTCGAAAAACATAAATTGGGATAGATACAGATTCTTGGTAAATTTGAATAATGTGAATGGTCTGGAACTGTAAGCTTGGTTAATGATTTGATACAGATTCTTGGTAAATTTGAATAATGTGAATGCATAGTTGTAAATCGGGACGTCTAGTAAATGATACAGATTCTTGGTAAATTTGAATAATGTGAATGTAACAATATCGACATAATTGAATACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATAATGTGAATGTCAAAATTTTTTAGATGATGGACAAGCAAT # Right flank : TTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATGTCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACTAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTCA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 12207-9928 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXKD01000027.1 Streptobacillus moniliformis strain NCTC 11941 contig_52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 12206 36 100.0 30 .................................... AATAAAATTCTATATATATACAGGAATATA 12140 36 100.0 30 .................................... TTATTACTGGAGGTAAAGACGGAAATTTTA 12074 36 100.0 30 .................................... GAAGGATAGATTTGGTTATTATAGGAATAA 12008 36 100.0 30 .................................... TTGAAAAAATAGGACCACAATTTCTTGAAT 11942 36 100.0 30 .................................... ACAATAACACTAATAACAATTTGGAATATT 11876 36 100.0 30 .................................... GGATATAGTATTAAATGTTTCACCTTTCGA 11810 36 100.0 30 .................................... GGACGTCCAATAGGTTTGCTAATTCTGGGG 11744 36 100.0 30 .................................... CATAACTGCATGTGGATACTGTCCTTACTG 11678 36 100.0 30 .................................... TAAAAAAATGAAGGAGGACACCGATGATTT 11612 36 100.0 30 .................................... TTCCAAAGTTTAGTTCTAATCCTTCTTTTT 11546 36 100.0 30 .................................... ATTATTTTAGTAAATTAAAAAAGTATGAAT 11480 36 100.0 30 .................................... AACGCAAAATATACCTCAAGAATAATAGCT 11414 36 100.0 30 .................................... GAGAAGGTGCCAATCAACTTATAGGAGCCT 11348 36 100.0 30 .................................... ATTAACGACTTTTTAACAGCAATAGGAATT 11282 36 100.0 30 .................................... GAGATATTTTTGGACAAGCGTGGGGTTCTA 11216 36 100.0 30 .................................... ATGTACCAATTTATACATACGAATTGAATT 11150 36 100.0 30 .................................... AATAGGGATCGTCGGCATATTTCCTCTCAT 11084 36 100.0 30 .................................... TTATAATGGGAATAGATGGAAATGATGTTT 11018 36 100.0 30 .................................... ATACGACGCCGATAACTCAAACGGCACCGA 10952 36 100.0 29 .................................... GAAAATAAAAAACTATATCATACTTGCTA 10887 36 100.0 29 .................................... TCCTTGCTGTGCAGTTGCCCCCCCTAGAC 10822 36 100.0 30 .................................... TAACTTTTTGGAGAATTTGGTCTAACAAAT 10756 36 100.0 30 .................................... TTCTTTTTTTATTGCTTTTATATAAAATCT 10690 36 100.0 30 .................................... TAAAGACAGTATAAATGATTTTATATACAC 10624 36 100.0 31 .................................... AATACAACGCCAGTGACACAAACTGCGCCGA 10557 36 100.0 30 .................................... AAGGTATGTTTGTAACATTAACGTATAACA 10491 36 100.0 30 .................................... AAAAAAAAATCTATTAACAACCTTTTATGA 10425 36 100.0 30 .................................... ATGAAAGTGAAAAAGAAGAACTTACTTTAG 10359 36 100.0 30 .................................... AAAACAACATGGAAAGAGTTAAACAATATG 10293 36 100.0 30 .................................... ATATCTAGGTTTCGTTCTCATGTTGTTTAC 10227 36 100.0 30 .................................... AAGTGGGGGTTGAAATAAATAGTGAAACAG 10161 36 100.0 30 .................................... TTGATTGGTCGAAAAACATAAATTGGGATA 10095 36 100.0 30 .................................... GTCTGGAACTGTAAGCTTGGTTAATGATTT 10029 36 100.0 30 .................................... CATAGTTGTAAATCGGGACGTCTAGTAAAT 9963 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 35 36 100.0 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : TAACAATATCGACATAATTGAATACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATAATGTGAATGTCAAAATTTTTTAGATGATGGACAAGCAATGATACAGATTCTTGGTAAATTTGAATAATGTGAATGATTCTGACTTTTTGCTTGTCTCTAATGCCTGATACAGATTCTTGGTAAATTTGAATAATGTGAATGACATTTATGAAATTAAAAGAGGAAAGAGAAGATACAGATTCTTGGTAAATTTGAATAATGTGAATGCTTGTGTTATCTTAAAATCATAAGGACTATGATACAGCTTCTTGGTAAATTTGAATAATGTGAATGATAACTTATTTGATAAACAATCTTACCATGGATACAGATTCTTGGTAAATTTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //