Array 1 3004825-2998557 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039611.1 Aeromonas schubertii strain LF1708 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3004824 28 100.0 32 ............................ ATGGACAGCACCAGCGTGATGATCGCCCCGAC 3004764 28 100.0 32 ............................ GGTTTAAAGCACAGCTCGCGCTGCTTGATACC 3004704 28 100.0 32 ............................ GTAGGGGTACTGAGCTGAGCTGGCAGAGATTT 3004644 28 100.0 32 ............................ GTCCAGCCAAATGCCTTTACCTTTAAAGTTCC 3004584 28 100.0 32 ............................ TGGCGGTACTACGGGAGTTCTCCTCCACAGCC 3004524 28 100.0 32 ............................ AGGCGCACTCCACTGAGCGACCGGATATGCGC 3004464 28 100.0 32 ............................ GTCTCGATGGCCATCAGAAGTTGATCGCCATC 3004404 28 100.0 32 ............................ AGTACGCGCCGGCCAGTAGCACGGCCAGCACA 3004344 28 100.0 32 ............................ GCAAAGAACGATAGGGTCAGGCGCCGAGTATT 3004284 28 100.0 32 ............................ AGCCGGATACGGGGGCGGTGAAGACGCCGGTA 3004224 28 100.0 32 ............................ GCTCGGGTGCAGCTTGGCGACCCCATTGAGCC 3004164 28 100.0 32 ............................ AAGTCGTCGGCACGGGCGTTTGCCTTGGTTAG 3004104 28 100.0 32 ............................ AAGCGGTCAATGCTCATCTCGCCGGCCATCCC 3004044 28 100.0 32 ............................ ACCTACTGACAGGCCATCCGGCAGGCTGGTGA 3003984 28 100.0 32 ............................ TGCAACTGGTCCCACTTCTGGCGGAGCTTCTG 3003924 28 100.0 32 ............................ ACCTACTGACAGGCCATCCGGCAGGCTGGTGA 3003864 28 100.0 32 ............................ TCTGCGTACCCTTCCGAAAGCGCGGTCCCCGT 3003804 28 100.0 32 ............................ ACCGCCCTGGCGTGCGGCACGCACTGCCGGAC 3003744 28 100.0 32 ............................ AGCCCCGGCGATCGCCTGCAGTGCTCGGAATG 3003684 28 100.0 32 ............................ AAGTCCGCCGCCACGAACACCGGCGACTACTC 3003624 28 100.0 32 ............................ AGCCCCGGCGATCGCCTGCAGTGCTCGGAATG 3003564 28 100.0 32 ............................ AACGGTATCGAACTGCTCGGCAGCCACGTTGA 3003504 28 100.0 32 ............................ ATGCACCGCTGGGGCAAAGCCAGCGAGATGAA 3003444 28 100.0 32 ............................ GGCTTCCAGTCCGCCGCCACGAACACCGGCTT 3003384 28 100.0 32 ............................ AGCAAGAGGCAGTTGATGCGGTGATCGAGCAC 3003324 28 100.0 32 ............................ TCCCCCTGATGTCGGCCTAACCATCCGGGAAC 3003264 28 100.0 32 ............................ CGGGCGTGTCACGCTCAAGGGCATTACTGACC 3003204 28 100.0 32 ............................ TCGTTCTGTCCGGTTTCGCCTCTGCTGCTGTA 3003144 28 100.0 32 ............................ GGCAAGATCAATCTCCTGGTCACTGAGCCTAC 3003084 28 100.0 32 ............................ TGGGTGACTTCGCATAATGTGAGGCAGGATTA 3003024 28 100.0 32 ............................ TGAAAATCAACGAGGGCGCCACCGAGGAGACC 3002964 28 100.0 32 ............................ GGCAACTGCAGCTCTATCAGAAGCGCGGTATC 3002904 28 100.0 32 ............................ GCCATGCTCATCCGAGTCACCAAGGAGGGCAC 3002844 28 100.0 32 ............................ ATCACCCTGCAAGCCGACTCCCCGAGCATCGA 3002784 28 100.0 32 ............................ TGGTTCCGGTGATATGAAGTGCTTGTTCACAA 3002724 28 100.0 32 ............................ AGCTCATGCGCAACAGTGCCATGGACATCACC 3002664 28 100.0 32 ............................ TGGTGCTACGTGCACTGCTTGGATGACATTCC 3002604 28 100.0 32 ............................ AAAAGTTGCTCGCACATTTGGCGACAACTCGG 3002544 28 100.0 32 ............................ CCTTACGCTCCGGGCTGGTATTCCCTGAGTGA 3002484 28 100.0 32 ............................ TGGCACACTTGTTTCAGTGAAAACTAAAAAAG 3002424 28 100.0 32 ............................ GTCAGGCCCAGTAACAGCGCGGCGGCGGATGC 3002364 28 100.0 32 ............................ CGCTGGCCCCGTAGGCTGGGGCGCCGCTGTTC 3002304 28 100.0 32 ............................ TGCAGCTGCGCGACCGTTCCCCCCGGGCCAGC 3002244 28 100.0 32 ............................ TCCGAATCCCCAATAAACTGGCCGATGATGGC 3002184 28 100.0 32 ............................ ATCATTTCGTAATAACTGTTAATGGCGGAAAT 3002124 28 100.0 32 ............................ CGATGCCGATAAATAGCGTTATCGGCGCATCA 3002064 28 100.0 32 ............................ TTGATGGCCTTGTAACCCTTGGCGACGGCGTA 3002004 28 100.0 32 ............................ AAGGAGCTGCGGAGCAGAAGTCTGCTGCCCGC 3001944 28 100.0 32 ............................ ATTAGCACCCTGAACGGCATCAATAACCATTG 3001884 28 100.0 32 ............................ TGGTTGACTGACACCGAGCGCGACACGAAGAA 3001824 28 100.0 32 ............................ AATCGGGCCAATCGAGAATGTCCGGGGCGACA 3001764 28 100.0 32 ............................ AGCAGGCCAGCGCCCGCCATCGAGGCGGCGAT 3001704 28 100.0 32 ............................ GTGCCGATACGATTAACCTCGAGACCGGCCAC 3001644 28 100.0 32 ............................ AGTGACAACGGCAGCCACAGCAAACACGACAG 3001584 28 100.0 32 ............................ TGTCCACTCTGGTCCCCGACTTCAGTGCCGCC 3001524 28 100.0 32 ............................ TCTTTGGAAGGCGCTGGCCGGTAGCCGCTATC 3001464 28 100.0 32 ............................ GACAAGACCGCGCTGGCCAATGGGGCCGATCC 3001404 28 100.0 32 ............................ TCTATTTGGACCTCCTCTCCCTATTTCAGGGA 3001344 28 100.0 32 ............................ AAAGTGGCGCACCAGTACCGGCGCCACCATGG 3001284 28 100.0 32 ............................ GGCCGCCGCCACGATGTTGGTCATACCAACCT 3001224 28 100.0 32 ............................ ACCCCCTGCACAGGGAGTAGAATATGGGTAAT 3001164 28 100.0 32 ............................ AGCGGCCAATATACCGAGAGCACTATTCATCC 3001104 28 100.0 32 ............................ GTCCAGAGTGCGGCATTGTTCAGGATTGGGGA 3001044 28 100.0 32 ............................ GGTCAGCAGTGCAGGGAGCGAGTAGAGCGCGG 3000984 28 100.0 32 ............................ AGCACATTGAGACTGAACAAAGAGGAACAAAG 3000924 28 100.0 32 ............................ AGAGGCCCGAATGAGAACGGTGTCACAGAACG 3000864 28 100.0 32 ............................ ACCGCCATGTATGCAATTAAATGGATGCACGG 3000804 28 100.0 32 ............................ CGCAACCCATTGAAGGATCTAGCGCCCAAGCC 3000744 28 100.0 32 ............................ ATTCTCATGAGTCGTTTACATGCGCTTGGTAT 3000684 28 100.0 32 ............................ GCAGGAGTATGCGGTAAAGTCCGGGTGTTACT 3000624 28 100.0 32 ............................ GACGCCATCAAAGACGCCGCGCCGCGCGAACT 3000564 28 100.0 32 ............................ CACCGCCCCGCTCACTTCTCCACAGGCGAACC 3000504 28 100.0 32 ............................ TCCAACATGGCCTGATCCAGTGCCCAGGCTTT 3000444 28 100.0 32 ............................ TGCCAGACCAGGCGCGAGCGCCTGCGCCGGTA 3000384 28 100.0 32 ............................ GACCTGCAACACGCCGCCGATCGCCTCGGCGT 3000324 28 100.0 32 ............................ AGTGGTCTGGGGACGTGGTTGGACCTTATACC 3000264 28 100.0 32 ............................ AGTGGTCTGGGGACGTGGTTGGACCTTATACC 3000204 28 100.0 32 ............................ GCCGTCAGCGTCCATCACTACGGAAGGCACGC 3000144 28 100.0 32 ............................ GCTACAGCGCTCAAAGCCTGCATCAAGGCCTA 3000084 28 100.0 32 ............................ CGATAGAGCCCCACCTTGCCGAAACCCCTATC 3000024 28 100.0 32 ............................ TGTTGAATGGGTGAGCCATAGCAACATCACAT 2999964 28 100.0 32 ............................ GGAAGACATCGACCGTGGTCTTCGTGTGTCCA 2999904 28 100.0 32 ............................ AGCAGAACGAGGCCAGCAACAGCGGCACCGTC 2999844 28 100.0 32 ............................ GAACATCATCACCGCCTCGGGTATCCGCAACT 2999784 28 100.0 32 ............................ TTGTGCGAGGCAGCCGGGGACCAGTCGCCCCA 2999724 28 100.0 32 ............................ GGGTCGATGTCTTTGATAGTGCGGAGGGATGG 2999664 28 100.0 32 ............................ GCCACCCCATGCGCCAAGCGCCCCGCCAACCG 2999604 28 100.0 32 ............................ AGTCAGGCCAGGTCTCCAGCACTTTGACCACC 2999544 28 100.0 32 ............................ TGTTGCCACGGCACGAGGTCGCCCCGGATATT 2999484 28 100.0 32 ............................ CTCCCGTGGGTGGTTCGCCGGCCATGGCCAGG 2999424 28 100.0 32 ............................ TGTTAGGCAGCCTTGACGATGGAGCCAGCGAA 2999364 28 100.0 32 ............................ ATGACGGTGGCGATGGCCGAGACCACCAGCTG 2999304 28 100.0 32 ............................ AGTTTGGCGATCTGCTCGTCTGTGGTCTCGGC 2999244 28 100.0 32 ............................ AACGAACCCGCCCGGCGGTCGAGGGAACAAGA 2999184 28 100.0 32 ............................ AACAAACAGCTATATCATGGGCTGGTGCAACT 2999124 28 100.0 32 ............................ AGAGGCTGCAGGCAAGGCCGTCCCTGACGCTA 2999064 28 100.0 32 ............................ CCAAGACAATCGCCGCCGTTGAGGCGTGGCTC 2999004 28 100.0 32 ............................ TCAAGGAGCGCGGCGGCGTATGTTTGCGGTAC 2998944 28 100.0 32 ............................ TGGATGAAGCTGTTCGGCCTGCGTGATGGCAA 2998884 28 100.0 32 ............................ GTAAGCGCGGTTCAGCTCACGAACTGCCACAC 2998824 28 100.0 32 ............................ ACTTGTACTTTCGACGCTGGACCAGCCACTCA 2998764 28 100.0 32 ............................ TTGGGCATACGGCATGAAGACGGCGTTGATAA 2998704 28 100.0 32 ............................ GACACCCGGCAAGCCAAGCACCAGCACCTGAC 2998644 28 100.0 32 ............................ AGGTGCACCGGGTCCACACTGCTGGCGACCAG 2998584 28 85.7 0 .........T..G....T....T..... | ========== ====== ====== ====== ============================ ================================ ================== 105 28 99.9 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : GGCCGATCTGCTTAACCTCTCCGAGGTGAACTGGTTGCAAGGGATGCGGGACTATATCCATATCGGTGACCTCACACCTGTGCCCCAGGGCGTCTGCTTTCGCGTGGTCAGGCGGGTGCAGGCCAAGAGTGCTTACAACAAGCGTCGTCGCTCGGTGGCCAAAGGGTGGTTGAGTGAAGAGGAGGCGCTGGCCCGCATCCCCGACACCCAGCAAAAGGCGATGACCCTTCCTTATGCCGAGATGCACAGTCTCTCGACTGGGAGCAGGATGCGTCTCTATATCGAACATGGCCCCTTGCTCGATAAGCCGGTCACAGGGCTATTTAATGCCTATGGGCTTAGCGCCACCGCGACCGTCCCCTGGTTCTAACCCTTTTTTTGAGGGCGTTGACAACCCATTGATTTATAGATGGGTTCTGCGCCCTGCTTCTTATTAGGGGTTAGCGGTGTAACTAAGCCAAGTTCTTTAACAATCAATTAGATAGTGCTAATGTGCCACA # Right flank : GAAGGTCGGGCGGGACGCGGCCAGCTGGGGGACCTCGCTACTGTACAGGTAGAACCTTTCTCCCCCTCTCACCCCTCCCTTTATCAATCTGATAATCCCCGTCCGCTTTTTATCATTTTTGCCGCGCGCTGCTTCTGCTCACCTCTGCGGTGGGTGGGGGGAGGGGCGGCTTTTTTTCTGGCCGCTCCCCTGTCCGGGGGGGCGGGGCTGCCGGCGTGCAGGCGTTGTGTGAACCGGGTCACGGGAATGGGTGATGAGGGGAGGGGGAGCGGTTATTTCGAGTGCTTGGCACGCTTATTGATTGCCCCTCATGGACCGCGCTTTCGAGTGTTCACCCCTTTTCATTGTGATGGTGGCATTCGTTATTAAAGAGAGAGCGCCATCCATATTTTCATCCAATGAGTGGGGCGAATGATGAAAGACGTGAACCAGTTAATTAAAGAGATAAAAAACCTCAAGTCAGGCCTGCATGAAAAAGATTTTCTGCTGACCTGGGAGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //