Array 1 195115-198128 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICW01000001.1 Paenibacillus taichungensis strain DB-4 Ga0222418_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 195115 33 100.0 33 ................................. CTCGCAGCTCAGAAGCAAGCAGAGGAAGACGCA 195181 33 100.0 34 ................................. ATAACTGGCGAAGGGCGGTGTGATGCGGGGAAGG 195248 33 100.0 35 ................................. ACCGTAGCCGTGGAAGCAGCTGCCAAGCGCTATGA 195316 33 100.0 35 ................................. CTAGATATGCTTGGTGCAATCTTCGATTGGACATC 195384 33 100.0 35 ................................. TTCAATAAGAAAGGACAAGACATATGAATAAGCAC 195452 33 100.0 35 ................................. AATGAATGCACAGAGAAAACAAAGTTTGCATTGAG 195520 33 100.0 36 ................................. TCTTTATACTCTAATACAACTAGCTATATATTATAT 195589 33 100.0 35 ................................. AGTTTAGCGGCAACTGCTTCAGCAGCGCCAAAGAC 195657 33 100.0 35 ................................. AATCCGGAAAAGGCCGCACGTCTTGCCGGTGGCCA 195725 33 100.0 34 ................................. TGGGAAGGTCATCGTGCGGCTTTGGTACTTCTTC 195792 33 100.0 35 ................................. AATAGGTCATCGTATAAGCGGCCGCCAAGCTCACG 195860 33 100.0 35 ................................. TCCAGGTCCTTAACGTTGTAATAGCCCATCAATCC 195928 33 100.0 36 ................................. CATTCGCTACGCGGTATCCAGCTCGTGTTGTCTCCC 195997 33 100.0 35 ................................. TCGATCATCTCGATCATGCCTGTTACCACAAATGC 196065 33 100.0 35 ................................. ACTTGGCCTGAACCAGCTCGAACAGGTGGCAAAGA 196133 33 100.0 33 ................................. TGCAGGGCGGCCTAACTGATCATGAGGCCGACG 196199 33 100.0 35 ................................. CCGACAACGGGTGAACCGGATGAAGGAGTGGACAG 196267 33 100.0 36 ................................. ATCGGATTGCCGTACAGCTTGGGTTTCTCGAAGGGA 196336 33 100.0 35 ................................. TCGCAATTTACGGACCATGGATCTTGCTTGTACTC 196404 33 100.0 35 ................................. TTTTAGGTAGGGTTGATCTGAGATTGCGTTTTCCT 196472 33 100.0 34 ................................. ATTGCGGGCGATATCGCAGGGACTCCGATTAGTG 196539 33 100.0 36 ................................. CTAGCAAGATAAAGTTTATCTTTGAGGATATATCTA 196608 33 100.0 34 ................................. CATAAGGTGCAGCACGTTGTATCTGCCTGTGTTG 196675 33 100.0 35 ................................. TTGAGTGGGTTTAAACGCTTTTCTGAAGTTACCGA 196743 33 100.0 35 ................................. TGTGTACCATTGCAATAGTGAGAAACCATGCGTGG 196811 33 100.0 35 ................................. TATTTGTATCGCTGAAGATGCCTATAGTTCGTTAG 196879 33 100.0 35 ................................. ATACCAACTGTTATTGTTGAAGTTCGCTTGCAGTA 196947 33 100.0 34 ................................. AGTCCTGACGGGGTTTATTTGGCTGTGGCACATA 197014 33 100.0 35 ................................. CATATCTCGATGCTCAAGGACAGCCAGTTCAGCAG 197082 33 100.0 34 ................................. TATCCAGATGATAGACACATTATGGATGGACTTT 197149 33 100.0 33 ................................. CGTGTACAAATGGTTTTATATGCCCTCGATTAC 197215 33 100.0 33 ................................. CTTGGAAGTACAATGATGAAGAACAACCATTGA 197281 33 100.0 36 ................................. GCTAGCAGTCTGGAAGCATTTACTTCAGCTGATTTA 197350 33 100.0 35 ................................. GTCACAAAGTACGACCTGAACAGGACGCGATGCTA 197418 33 100.0 34 ................................. ATCTTAATTCCAAAGGGAGACGGGACCTTTATCC 197485 33 100.0 36 ................................. TAATGAGATACCAAGACACCCTATTCTACGACGACG 197554 33 100.0 33 ................................. ACAACCCTGGGCATTATCCTTATGGCTGCTATC 197620 33 100.0 37 ................................. TTTGTTTGAAGATTGAGATGTTGGGTTAAAGTGTCAA 197690 33 100.0 35 ................................. ATCTAAAACTGGCTTTCCCCGTCTCTCCTGCTACT 197758 33 100.0 36 ................................. AACCAAGTGCAGTACGGTGATCCAGTCGAACACAAG 197827 33 100.0 33 ................................. TCAGACATTGACCATCAACTGGAACAGTATTGT 197893 33 100.0 35 ................................. ACGGTATCGACTGACTACATATTAGGAAGAACTGA 197961 33 100.0 35 ................................. AACGGCCCACTAACGTTTTTGCAGTTGGCGATCAA 198029 33 100.0 34 ................................. ATCCAAATGGGCAATTCCGGACTAAAGGTTCAGG 198096 33 97.0 0 ....................T............ | ========== ====== ====== ====== ================================= ===================================== ================== 45 33 99.9 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : GCAACCCGACATTCTGCTGTTCGACGAGCCGACCTCGGCACTCGATCCCGAGCTGACCGGAGAAGTGCTGCGCGTCATCAAGCAGCTGGCACAGGAGAATATGACGATGATGATCGTCACCCATGAGATGAGCTTTGCCCGCGATGTTGCGGATCGCGTCTTCTTCATGGATAACGGCGAAATCGCCGAGGCGGGTCCGCCGGAGCAGATCTTCGGTAATGCCAAGCTGGAGCGCACGCGTACGTTTTTGCAGCGGGTGGAAGTGGAAGGGTAGAGGGCTGAACAGGAGCATGAGCAGGTGCGAATGCCAAGCTCCCATGAAAACCCCGGGAGATTCGCACCTCGTAATTTGTCGAAAACGTCATTTTGTGACCTTTTGGCAACAGATTACTTGAATATAATGGGTTTCATATATTAAACTAAATATAATAATTGACTAAATGATCGAAAACACGTAATGAGTATATATACATATGCTGTTGTTACGTGTTTTTTTCGCT # Right flank : TTGATGAGGGGAGGCCTGAAATTAAAGGCAAGGTTTCTCTTAGGTGATTTTAGATCTTTTCGCTATGTTTGATCTTCTCGTCCTGAACTAGAGTGCTATAGTTCTCTTCACATGCATACTTCACGTATTTAGTCGATAAAGTAAATATATTAAATAAAATCGGAATATTTACAAATAATGGAGCATATTTTCCTGGTTAATCAAGTATAATAAGACTACTTAATAAACAGGGAGGATTTACCTTTGGATCAACGTCACAATGATGTGGATCGTTATTATAGCGATCCGCTTCCGCCACCACCTTATGTAGTACCAAAAACCAATAGCAAGTCTATCGCAGCTCTTGTCTTGGGGATTTTGTCGCTCACCATACCATACTTGGGATTTTTTATTGGTATCGTAGCTATCATATTTGCGTCGCTGGCACTGAAAGAACTCAGAATTCGTATGGAACAGGGGAAAGGTTTGGCCATTGCGGGTCTCGTCTGTGGGATTATTGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 202060-203145 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICW01000001.1 Paenibacillus taichungensis strain DB-4 Ga0222418_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================================================== ================== 202060 33 100.0 34 ................................. CGTTCGACTTGATCACAAACACCAATACACAAAT 202127 33 100.0 36 ................................. ATAATCCGGCATTGTACCCACAACTAATGTAGTACC 202196 33 100.0 36 ................................. ATTACCCTTGGTATTCGGCCCGATAAACGCGATCAC 202265 33 100.0 34 ................................. ATCGATAACCGTCCATGGAGATGAAGGAATTCGA 202332 33 100.0 36 ................................. CAGTCATGGTTACGCAAGTGGACTCTAAAGGTGGAC 202401 33 100.0 34 ................................. TTCCGTCGCTGCTTTGGCACTGAGGAAACCGGTT 202468 33 100.0 34 ................................. ACGCAAGGCATCCGTGACATGGCTAAAGAAATCC 202535 33 100.0 34 ................................. AATGAGTTCTTCAAGCATCCAAGACGCACGCTTG 202602 33 100.0 35 ................................. ATATGCATCACGTTAACTGCCAGTGTCGCCTATGC 202670 33 100.0 72 ................................. CATGTAGAAATAAACTCGGTGATTTGTATTTTCAAGTCGCACTCCGTATGGAGTGCGTGGATTGAAATNNNN 202775 33 84.8 35 NNNNN............................ CATGTAGAAATAAACTCGGTGATTTGTATTTTCAA 202843 33 100.0 34 ................................. AATGAGTTCTTCAAGCATCCAAGACGCACGCTTG 202910 33 100.0 35 ................................. ATATGCATCACGTTAACTGCCAGTGTCGCCTATGC 202978 33 100.0 35 ................................. CATGTAGAAATAAACTCGGTGATTTGTATTTTCAA 203046 33 100.0 35 ................................. CAGTAGATAAGCGATATATTCAGGAGTCTTGGCGA 203114 32 90.9 0 .........T.............-A........ | ========== ====== ====== ====== ================================= ======================================================================== ================== 16 33 98.5 37 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : TCGTACCTTTGCCCACATTGGCCAGTCTCGCAACTTGCTCCATTGTGGTGGCTTTGTATCCAAACAACGCGAACGATTTCTCAGCAGAATCAATGACCTGCTGCCTTCGATCGATGGTTTTCATGGCAGCTAACACCTCCTAATCATATGCAATGATAAAAGACAACTCAGAGTTGACCGGATTACTTATTTGGTCAATTGGTCGTTTATAACTGTAGCACTCAGGCAGGAATGGTGGATGTGATCTTTGTCATGGTTGGATGGGAGATAAAAAAGATTATTCCGGGGAATCCGTACGTGACTCAGGCAGGTGCGAATGTGATGCTTACATGAAAACCCTGGGGGATCGCACCTCAGATTATGTCGAAAAGAGGTATATTATTGCCTTTTGGCAAAATACAGACAGGAATGGATTGAATTATAATAAGGAAAGTCATAGAATAATAGTGAAAAAACGTGCTTTTGATGGATCAGATCGTTAAGATACGTGTTTTTTCGCT # Right flank : TTGGTTGCGATCAAAGCGGGCACCCATCCATTGGAGCTACAATCCGAATGGAGTGCGAAGATCAGGAGGAAGATAAATAAAAAAAGGGAATTAAAATGCTGGAACGTGTTACCGTTCTTATATGCAGCGTTGTAGGTTTAGAATTCCAATTATATTCCTTAAAAAAATTAGTGGGTTCAAAAATTCTGGTACACAGTATAGATGGGCCATCTATAGAGTGCGAAGTGAATAGATGCGAGCTTGTCTTTTTCGATTACTGAACGTTCGATTGGGGATGATATTAGAGGAGATTGAACCTTAATAGAATTAAGAGAGGCTCTTTTATTCAAAAGTTGATGATATATGTGCTAAATCAGGATAATATGATTACCTATTTTTTAAAAAAAATTATCGGAACTCGTGTTGCTTGAACATCAAATTTTCTTATTGGAAAGGAGTATCGGTTGTTAGTTGGAATATCGTAGATTAATGTGAAATACAGACAATTTTACCTATATAAA # Questionable array : NO Score: 9.02 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:-0.16, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 3 204999-205627 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICW01000001.1 Paenibacillus taichungensis strain DB-4 Ga0222418_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 204999 32 100.0 34 ................................ AAATATCTCTGTAGAATCAGAAGCTACTAAAAAA 205065 32 100.0 34 ................................ TTTATACATACTGTTTGCGTCCTGAGCTGATAAA 205131 32 100.0 35 ................................ GATCTCCGTGATTTCGGCTGCGGTGAGTTTAACGA 205198 32 100.0 34 ................................ AGGAAGCGAGAGAGAATTACAAGATTTGGCTAGA 205264 32 100.0 34 ................................ CTGATGATTTATGCACCCTGGATCATTTTGATCC 205330 32 100.0 34 ................................ GTTGTGTACGCGTCAAACGGCAAGCTCGGGCTAC 205396 32 100.0 34 ................................ CGCCTCAATCGTCGCCAGCGCGGAGCCGACTTCG 205462 32 100.0 35 ................................ AAAATCAACATCGGATTGCTGAAGATGGCTCTGTA 205529 32 100.0 35 ................................ TGATCGTTTTAATGCTGCATCGATAATAATCTCAA 205596 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ =================================== ================== 10 32 99.7 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TCGCTGAGCACCCCCAAGGAAATGTCAAAGAACTGATAGAGTCAATCATGGATAGATTGTGTGGCATGGATGCTTTGACATTTCTCACGGATGTCTTATTGTGGACTCCAGAACGTGTTGATATGAATTTGAAACTTGATCGTTTTCGATAAAAATATGATGCGATGGTCATAGCAGCATATAGAATTAAGATCAAATACATTGGATATTGATATTTTTTGGTTCTTTAGATGTTGATACTATCAAAATAATATTTTTAAGTAACAAAGATTAGACCGCTGAAAAGCGCTGCTTTACTGGTGCGAATGTTAAGCTCACATAAAATCTCTAGGAGATTCGCACCTCGAAAATTGTCGATTAAGCTATTATTGTCCCCTTTTGGCAACATAATTCTTGAATTACCTGGATTATTTGTATTAAGATGAATTTATCATCTTTACTAAACGATAGAATAACGTTTAAAACATCTTTTTTTAAACGACTATACGTTATTTTCTGCT # Right flank : TATCATTACGAGGTAGGCTGATAGGTGCCCACTGAAGTCGCAATATCAAAAGCACTAAAATGCCAATCACAAGTCAAAAGACTTACCATCATCTACACTAATCTGTAGCATGAGGTGAGTTTTTTTATATTTGATTGAATAGAGTTTTGACTTAGCTGCATATGTATTACTGTCCTCTTACCAAATTACATAATATTCTAAAAGTATAGAATTTATAGAAGGTGAATGTATTTTAGTGTCGAAATTTACAATGTGAGTCTTTTTGCCTATGGATCTGGGATTAATGTCATGAAATTCAGTGGAGGTGAAGTGGTGTGACCTATATTGCGCATATCCGTCAAAAGGATGGAACAGTACAAACCGTTCAGGATCACTTAGTAGAGGTTAAGCAAGGGGCGGAGAAAGCTGGAGAGAAGATTGGTGTCAAATATTTGGCAGGCATTGCTGGTCTTCTGCATGATATGGGCAAAAATACAGATCTTTTTCGAAACTACATTCTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 214155-216546 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICW01000001.1 Paenibacillus taichungensis strain DB-4 Ga0222418_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 214155 33 100.0 36 ................................. TTAAGCTCCAACCTAACCCGTTAATGTCGTCCATTA 214224 33 100.0 35 ................................. CTGCTTCCGTACACGGCCCTGAGACACTACTGGAC 214292 33 100.0 32 ................................. CTCCTATCCGGCGTCCATGACGTCGCTGCCTA 214357 33 100.0 35 ................................. GGATCGATAAGCAATAGCTTTAACTGTTGAGGAGA 214425 33 100.0 35 ................................. GGATCGGAAATGTACAAACTGCTTCTGACCTGGGG 214493 33 100.0 35 ................................. AGCTCAACAATAAAGAGAGAGGTTCAAAACCTCGT 214561 33 100.0 34 ................................. TTAATCTCGCAGCCAAGCCGCATATTAATGCACC 214628 33 100.0 35 ................................. TGATGAATTTGATTGGGCAACCGATTTGAAAATGG 214696 33 100.0 35 ................................. ATGGTGCTCTTGGGAATTCTGAAACAACGGTTGAT 214764 33 100.0 33 ................................. ATCAAAAATGACCGTTAGGGCAGTGCAACATAT 214830 33 100.0 33 ................................. TTTTAGATTTACGGTTTAATCTATGCGGGAAGC 214896 33 100.0 33 ................................. AGTTTAGCGGCAACTGCTTCAGCAGCGCCAAAG 214962 33 100.0 34 ................................. ACAAAGACGAGCTAGGGTGGAGTCGATTAGTTAG 215029 33 100.0 35 ................................. CGTAGAAATTATCATAGGACAGGTGATCATATGTA 215097 33 100.0 35 ................................. CGATTATATATTTCTCATACTCCATTTAAGATTGG 215165 33 100.0 36 ................................. TACTGCTGCATCCACAATGTCTCCTGGTATAACGCC 215234 33 100.0 34 ................................. CAACCGGATTGGCGTTTGAGGTTCCATCGGGATA 215301 33 100.0 34 ................................. CTCAGATCACCCGTATCTCCGACAGGGGCCAATC 215368 33 100.0 35 ................................. TGTTTACTCATGCCGCGTCAGCCTCCGTATCAATT 215436 33 100.0 36 ................................. TTATTGAACAAAACAACGTAGAGCAAAAGGAACTTT 215505 33 100.0 34 ................................. TTGGCAGGCTGCGTGGTGTATTTCAAGATTTGTT 215572 33 100.0 34 ................................. TTGTGCAGTTATGGTATTTATCCTTGGCGATCCG 215639 33 100.0 34 ................................. CAAACGTATTCTCTACGCCGTCAACGGTATAGAA 215706 33 100.0 32 ................................. AGGATCGAGAGAGTGGTTCGGAGGCTTCCAAA 215771 33 100.0 34 ................................. AAAATACGGTATGTATTACGCCCAAGCCTAAAGT 215838 33 100.0 35 ................................. AGACCCTGCTATGGTGGTTCCGAGCGGATCCCTTG 215906 33 100.0 33 ................................. ATATTCGAACCGAAGATCGACGGCCACCGCCTA 215972 33 100.0 33 ................................. AGCTATGGAAGACAACGTGCAGAAGTAAAGTCT 216038 33 100.0 35 ................................. AGCCCAGTTAACATGTGCTGCGTACTTGATATTGT 216106 33 100.0 34 ................................. CACGTGGAACAAAAAGGAGATCAATAAATGAGTA 216173 33 100.0 35 ................................. ATACTCAAACTGCACTACATCACCGTCGAACACCT 216241 33 100.0 35 ................................. CGTGATCGACTCATGAAGGAGCTAGAGGAGAAAGA 216309 33 100.0 35 ................................. AGTAATAAAGGGAATGGATACCAAAAAGGCGAGGT 216377 33 100.0 35 ................................. TCCGGCAACTGGGGAATTATAGCTCCAATCATATA 216445 33 97.0 35 ........................A........ TTTGGTGCCAAGAGTAAACGAAACCGAATGATGTT 216513 33 75.8 0 ........G...........T..TA..GAGT.. | A [216535] ========== ====== ====== ====== ================================= ==================================== ================== 36 33 99.2 34 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : AAGTAGGTGTGATGATTGCTTATTTTGATTACGTATGACGTGAGCACTATAGATAGTGAAGGCCGAAGAAGGCTATCTAAAGTGGCGAAAAAGTGTGTGGATCACGGTCAGCGAGTGCAGAACTCGGTGTTTGAATGTATACTGGATGCTGCCCAGTTTAGACGTTTAAGATTTGAACTGGAAGAATTGATCGATAAGGAGACCGATAGTCTTCGATTTTATAACTTAGGTGATAATTACAAAAGTAAAGTCCAACATGTAGGAGCGAAAGATTCCTATGATATGGGCGATCCTTTAATACTTTAACAGGTGCGAATGCCAAGCTCACATGATTTTACTGGGGGATTCGCACCTCGAAATTTGTCGAAAAAGTCTTTTTTGTGACCTTTTGGCAATGGATTTTAAGCAAATTCGATCGAGTAAAGGTTCTAACTAAGTTGAAATAACGAAAAGACGTTAATATCTATTCGAGAAATATTGCTATTACGTACTTTTTCGCT # Right flank : TTATCTATAAAAGTATACTGATGCATGAGGCCACCGTTCGTATGGGGGCCTTTTGGGCTTGATTGTCATGACCTAAAGAAAACACAAGTGAACGAAAAGACAGTCCATTGTTGCTCTCTCACAGGAACGCTAAAATGAAGTTGTTGAAGCGTTTACATTACATGGTGAAGGGAGCTTAACTCGGATGCCAGAAATTACGATCAGACTGTATGAAGGCAGGACGGATGAGCAAAAGCAGGAGATTGTGGAGGTGTTCACACGCGAGCTATCTCGTATTATCGACCGTGAGCCGGATTATATTTCCGTTGAATTCAATGAAATCCCATGGGACGAGAACGTTCCTGATAATTTGAAAGCCATGCAATCACAGAAGCAAGGAGGGGAGAAGACGTGAAGCCGGCGGACATTGCGCCGCCAAGCCGAGGAACAGCCAGACTTAATTCGTCTGGTCTGGGCAATCGGCTCGGAGATGCGGGACGTTATCTGTGGCGATACCGGAT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //