Array 1 190527-189749 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHWGP010000004.1 Streptomyces sp. DH5 NODE_4_length_334473_cov_35.377848/1-334473, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 190526 33 100.0 28 ................................. CGGTGGACTCGTTGGTCGTGGCCCACCG 190465 33 90.9 28 ..............................AAC TCGAGGCCGCGGAGACGACCCTCCGCCG 190404 33 93.9 28 .............................T..A AGACGTACCGCAAGGCGCAGGCCCGCGC 190343 33 90.9 28 .............................A.AC AGCGGTGAGCGGCCCTTCCTCGACCCCC 190282 33 90.9 28 ............................TAA.. CGAAGGCCCCCGGCGGACACCAGGGGCC 190221 33 97.0 28 ................................C ACCGCCGTGGGGGGCCGGGGTCGAGTCG 190160 33 97.0 28 .............................A... GGGAAACCGTGACAGGGGATGGGTGTCA 190099 33 100.0 28 ................................. CGTCAGTCTCGGTGAGTTGACCGATGCC 190038 33 90.9 39 .............................T.CC CCCTCACCAAGCTCGCCGCCCTCCTGTCGTCCTCCTGTC 189966 33 97.0 29 .............................T... GTTTGCTGTGCTGGCGGCCCTGCGCGGGC 189904 33 90.9 28 .............................GA.A TTGCGGATCCCGCGGGTGCGGAGTACGG 189843 33 90.9 29 ..............................GCC CCCCAGGACGCCAGTTCGGCAGGGCTGGT 189781 33 90.9 0 .........................C....AT. | ========== ====== ====== ====== ================================= ======================================= ================== 13 33 93.9 29 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGG # Left flank : GGGATTCTCCAGCCGGTACACCACGACTTGCCCGACCACCATGGCCACCACCAGCAGCCCGATCGCCGGGACCGAGAACCGCTGGATGACTTCGAGCACCCACGGTGCATCGTCCGTGCTGGTGGCGTAGTTGGTGGTGATGCCGAGTAAGCAGGCGACCAGCACCAGCATGACCTGGAGCAGCACCTGCATCCGGTTCCTCATCCGACACCACTCACGACCATGTCAACGCCCACCGGCACGCCCTACCCCCGATCCCCCGGCCTCAAGAACCGGTACCTAGCTCTCCCGGCCCTCACATGGACAGGAGAGCCCGCGACCATCCTCCGTGGCAGCAGGAGCACGATCAACGGTGCAGGCCGGATCCGGCCACAACGCAGGAATACCCCGCGTCGGCGGGGAGGACTGGGCGGCCTCGATCGGCTCCCCCTTGAAGGCCGGAACACCCCCGCGTCGGCGGGGAGGACGCCAGCAACCGGGCGCCGTGGTGCTCGCATCCG # Right flank : GAGGAATCCCAGCAGGCACCTGCCTTCCCCACCTGAACAAGCGATTTCGCAGATTGGAACTGGCAGATCAAGCAGTTTGGCTATCAGTGCCGTTAAAAGTTCGGAGGAAGGCCGTCCAGGCGGCGGGAGGGAAGTGGAGGACGGGGCCGTCCGGGATCTTGCTGTCGCGGACTGGGACAACGGCGGGGATGCCGGCGGCGACCTCTACGCAGTTGTTCTGGCCTCCGTCGCTGTAGCTCGACTTGCGCCATGTCAAGGTACCGAGATCGGGAGTGCGGTTCATGATCGGTGCTCCTCCAGGATGCGCTCGATGAACGTCACCGATTCCAGCGGCGTCAGCGCCGCGTCGCGGATCCGATCGTAGGCCAAGCGGTACTTGAGGAAGTCATCCGATTCTTCGATCAGTTCACCCGACGCGCTGCCCTCCAGATAGGCGACGGAGCTGCCGTCCGGCTGCCACAACAAGGAAAGCGCACCGTCGGGAACTGGCTGCACTCCCA # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.91 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //