Array 1 386331-386495 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGIL01000001.1 Clostridium botulinum strain ATCC 7949 contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 386331 32 100.0 34 ................................ CTTGCACTTTAACTGTATTAGTGTATTATTACAA 386397 32 100.0 35 ................................ TAATAGCTTTATCTATTATATTCTTGCTAACCTTA 386464 32 93.8 0 ..............................CA | ========== ====== ====== ====== ================================ =================================== ================== 3 32 97.9 35 ATTTAAATACATCTCATGTTAATGTTCAATTT # Left flank : TGAAATAGAGGAGCATCAAAGAAAATATTCAGAAGAGGTAAAAGAAAAATATGGAAACACCTCTGCTTATAAAGAAAGTAATGAAAAAACATCTAAATATACAAAGGAAGATTGGAGTAATATAATGAAAGATTGGGATATTATTTATAAAAAACTAGCAAATCTTATGGACAAAAATCCAGATGATAAAGAAGTTCAAGAATATATACACCAATCTAGAGAGCATATTTCAAAAAACTTTTATGATTGTACTCCTGAAATATTTAGAGGTCTTGGAGAAATTTATGTTAATGATGAAAGATTTACTGCTAATATAGATAAATATAAAACTGGTCTTTCTAAATTTTTAAGAGATGCTATTAATGTTTATTGTGACAATATAAAATAATAATTATATGCTTTTTTAAAATATTATCTAAAATAGCTTGTATTTGTTACACAAAAATAAGGTGATTCAAAATAGATTTAATTTATTTTGAATCACCTTATTTTACATGCTG # Right flank : ATAGTAAAATAGCCATTTCTTAATTTTAAGAATATCATATAAGCCTTGATTTTACAAGGTTTTAAAGAAATTTTTCCAACCGTTTACCATTTTTTATAAAGGTAGAGATAAAACTTATCTTAAAGCTTATATTTCAATACCTAGAATAGATTTTAAAATTAAATGCGGTTGGAAAATTCTTTTACTTATAGTTAGATTAATTAGTTACTAAAATTAATTTTATTTTATTTTTAAGGGTATTCCACAGGTTACTAAATAAACCTCATCACTCAAGGAAGCTATAAATTTATTTATAATACCTTGAAAATCTCTAAATATCCTACCTAATTTATAGGCTGGAACAATGCTATAACCTACTTCATTAGTAACTAATATTATATTTTTATTTTCTTCTTTTACTGATATTATTAGATCATAAAATTCTTTTTTTATCCCCTCTAAAATTTCATCTAATTCTCCCTCTTTAATATTTTCATAATCTATTTCTTTATGAAACATTA # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAATGTTCAATTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 5845-6072 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGIL01000025.1 Clostridium botulinum strain ATCC 7949 contig_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 5845 30 100.0 35 .............................. GTAATGTAACTGTTCCAGGGAAGAAGAAATTAGAA 5910 30 100.0 34 .............................. TATATCCTCTAGGTAGTGTGTCACCAGTTTTTAT 5974 30 100.0 37 .............................. AATATAACTTTAATAGTATGATAATCTGGAACTATTT 6041 30 90.0 0 ........A......T.............A | TA [6065] ========== ====== ====== ====== ============================== ===================================== ================== 4 30 97.5 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : ATGCTGAAAATATGGCTAATGCTATTGTTAAAGGACTAGTAGGGGAAACTACAAGCAATATCACACTAAGTCAAGCATCTACAAATAATAATAGTTGGATTAATTTAGATGGTAAAACAGGCACTATAAATACACTAAGTGGTGTAAATATTAGGGAAAAGAAATCTACATCTAGTAGAATATTAGGTGCTTTAAGTACAATTATATAGAAAAGAAGGAGATTGGATACACATTTATTATCCTCCACATGGTGGATATGTTTATGCTAAATATATAAGATATTAAATTTTTGAAGGTATTTCTATAATGTGAGTAACTTTTATTTTTCCAACCTACTTTAATTTTAAAATCTATCTTAACCATTGCTATACAATGCTTTAGGGTAGGTTTTCTATATAAATTTTAAATCATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATGCTTTTATGATATCTTTAAAATTAAAGAATGGCTATTTTACTATG # Right flank : AATAATAATTGTAGCTTACGCTGTAGTTATTATTTTTTTATTATTCAAAGGAATTTTCTAACATTTATAGAATATTAAATATAACGGCTTACCAATAATTTAGGCAACCTCCTTGCTTAAAAAAAAGAATCCCAATAAAAAGGGGTTCTTTTTGAATGGAATTTTCTATATATCTATATATTGGTGCTATGTTTTGGTCTATTCTTATTATATCCAGATGTAGAAAAATTAATCAATCAGAAATATATAATATGTAAATTTTTAAAGGTACTTCTGTAATGGAAGTACCCTCTTTTTTTATTGGAAAAATTATCATAATTTATATAAATTTATCATGAAAGCTATTGATTTATTATACTACACGTAGTATAATTGTAATTGTAAGGAGGTGAGAAAAAAGGTGGTCAAATTAATAAGAAAATTAAAAAAGCTTGATAAACTACTGGGAATAGTCATCAAGCTACTGGTAAAAATAACAATCATAATAATGCCGCTTAAAC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 741957-742115 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGIL01000007.1 Clostridium botulinum strain ATCC 7949 contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 741957 29 100.0 35 ............................. TAATTTTATCATAGAAAATGTAATTCTATTTGAAT 742021 29 100.0 37 ............................. ACAATAGAGGGGCTAAGTTCCTGGTGTGAAGCAAAAT 742087 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ===================================== ================== 3 29 98.9 36 TTAAATACATCTTATGTTACTGTTCAACA # Left flank : TTATTATACCTGTAAATATAAAGTTTTTCTTCTTCCTAGTTAGTTCTTTTAAGTCTTTTTTGTTCTTTAAAAAATAACCTCCCACTGCAATTGCTGAAAAAATAGTTGCCCATCCCGTAAATCTAGGGAAACTTCCCATTAACACCATATACATTATCACTAATAAGGCTATATGGGATTTTTTCATATTACGAAATTTATCCACAATACTCCCTCCATATTTTTATAATATATTTCCTACACAAATATTCTTCTACAAGGTTATGGATAATCCTTCAAAAATATAAAATAATATACAATATTTACATAACTACAAAAAACTATTTTATCTATTCCCTTTAAATACTAAAAACCTGTCCTAAAAATAGACAGGTTTTTAAAATTGATCTAATAATTTACATATAAATTATCACAATGTGTAGTTTAGTTTTATAAAAATCCCTATGCCATTCTCTAAGAAGTAAGCGACTCACACCAACTCGTAGATTTGGGCTCTCTGC # Right flank : CATAGTAAAATAGCCATTCCTTAATTTTAAGAATAGCATATAGCCTTTGATTTTACAAGGTTTTAAAGAAAGTTTTCCAAGTGATTTTACTTTTTTATAAATATAAAACAAAAACCTATCCTAAGCCTTATATATCAATGGCTAGAATAAGTTTGTAAATTTGTTACGCCTGGAAAAATTCAATTATATATAAGCTATATACTATACTCATTAATGAAACTACTTCTCCCATTCTCGAAGTAGTAAGCGACTCACACCAAATCTGAGATTTGGGTTCCCTGCTTAAATACTATATTATTGATATGAAATGAAGCATTCCTCCAGATAATAATGCTACTACAGCACCTATTATAGTTCCAATACCAGCCCCTTTTACATGATGCCATGGATTTCTATATTCTTTATCCATATCCTCTGTACCAGGTATTCTAGTTTTTTTACTGTGACAAAAAAGACCTATATCTAGAACAATCATATCATAAATGTTTACTACAAAAAAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTAAATACATCTTATGTTACTGTTCAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 748984-748490 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGIL01000007.1 Clostridium botulinum strain ATCC 7949 contig_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 748983 30 100.0 36 .............................. TATACTATAAGTTTTAACCATAATGTTAATTTCCCT 748917 30 100.0 36 .............................. TTGTGTTTTATCAAACATTGGTGATACCTAAAGTTA 748851 30 100.0 35 .............................. AAACTATCTACTTATCTTTTTTTAAAATTAATTAA 748786 30 100.0 36 .............................. TAGAGAATGAAGCTAACTGATATGGCGGTAGTAGCT 748720 30 100.0 35 .............................. AAGGTTAAAATTCTAGGTTCTTTAAAAGCGTGGTC 748655 30 100.0 34 .............................. TATATTGGACAACAATAGTGAGGAGCCAGTATTA 748591 30 100.0 43 .............................. GTTAAATTTGTTTGCCGTTCTCCATCTATAAGTATTATTGAAC 748518 29 80.0 0 A..-...........AG...........GC | ========== ====== ====== ====== ============================== =========================================== ================== 8 30 97.5 37 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : TAAAGGTTTTGTTTTAAATACAAATGGACAAGAATCAATCATTAATGCTGATAGTGCCGTTGTGGCTATTGGATATTCATCTGAAAAAGACTTATATAATGAGGTTAGATTTGATATTCCAAATGCAAGACTAATTGGAGATGCTAATAAAGTTCAAAATATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAACCTTTAAATAAACTTTTGCAAAAAACTAGAATGGGTTAATATCCATATCTAGTTTTTTGTTCTTTACTGAAATTCTATAAGTATATGAGTGTTTTGTTATGTACTACTTGTGTATATTTAAAGTTTTCCAAGTGAACTCAAATTCAAAATCTATTCTAAGCATTGATATATAAGGATTAGAATGGGTTTTTATTATGTATTTCTAAAAAAGCAAAATCACTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAATGGTATATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AGAGAACCCAGCTCTGTAATTTAGTGTGAATCTCGTACTTCTTGGAGCAAGAGAGTAGATTTTTATTGACTAAAATATTTTTGAAATTTAGTTTTAAGTTTAGGTTGTATTTTAGAGTGCTGTTGGAATTTTAAACCCCATTAAAAGAAGTTAAATATTTTCTTTTAATGGGAGCTATATAAATTGTTAGATACTAATTATTTAAAAATTTATTTAATGAATCATTATCTTTAAATAAGTTTTTTAAGTTCTCATATTTTTGTTCTAAATTTTTTCTATCATATTTATAGGATTCTTCTCCTATATTCTCTACATTAAATTTAATAATTTCAGCATTTGGTATAAGATATAATAATACCACCGCATTCTTTTCTAAGAGTTCTTCAACTTTTTTGTCCTTCCAAAATTTATTATAATTTTCTTCCTCTAGATTTTCATTTGTTTTATAGTTAACGATTATTTCATATGGCTCTTTAGTAGTTTGTAGGGTAAATCCAGCA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 760388-760226 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGIL01000007.1 Clostridium botulinum strain ATCC 7949 contig_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 760387 30 100.0 36 .............................. AATGATATATAATGGCAAAAGAATACGAGGTATTCC 760321 30 100.0 36 .............................. TGTTCATATGTACCTTTAGAATATTCGACCCAATCT 760255 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 100.0 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : CATAGGCTGATCCAATAGTTAAAAAAAGTTCTGCAGTTATATCAGAATGAGTAAGGGTATAGCGTCTTCCTAAAATAGGCTCCGTTGAGGTTACACCATTTCTAAATTCAACTGAAAGTTTATCAGTATTCAATTTGTTCATTTAATCCCTCCCCATACAATACGTTTTATACAATATTATATGATAGGATTTATGAATTTAGTATATTTATATATAAATCAATTTTAATTATAATATTTAACTTAAATCTTGTATCAGATCTTGTACTACCAATAATATATCAGCTAATAGTACAAATAAAATATTTTCATATTAATTGAATTTTTCCAGGCATAATAAATTTATAAACCTATTCTAGTCATTGATATATAAGGATTGGAATAGGTTCTTATTTTGTATTTATAAAAAAACAAAATCACTTGGAAAACTTTCTACGAAGCCTTGTAAGATCAATGGGTTTATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : TTGTACATAATCTGAAATTAAAGCGAAGTAACCCTTGAAAATAAAAGTACTAACAATGTTCTTTGAAGACTGAATAATACGGTGTTAGGAAGTAAAAATTTTTTATAACAAAATATATCTTTACAAATGTAGTAAGGTGGCTTACTATATAAATGAGGAGGTTTCATTATGGAAAGTTTTAAATTTAGTCTTAGGGATATACCAAAACGAGAGATTTTAAATGAATATTCTAGCCGATTTCCGGGTATAAATGTAGATGCAGTCGAAAGCTGTATAGCACTCCTCAGGACGGCTTCTGATATTTCAAAAATACTTGATGAACACTTTTCTAAGTATGGCATTTCGGAAGGAAAATTTACAATTTTGATGCTGTTATATCGACAGAGTGATTATCAATTATCTCCAATATCTCTTAGCAAAAAAGCTGAAGTTACTAAGGGAACTATGACAGGATTAATAGCTGGCCTTGAAAACCAAGGTTTCATAGAGAAAATCTCCAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //