Array 1 275966-275204 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PQWY01000001.1 Legionella pneumophila strain LG61 LG61_Contigs_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=====================================	=====================================	==================
    275965	    37	 100.0	    36	.....................................	TCTTGAACAATTGCCACTTGAAAACCATCATCTACA 	
    275892	    37	 100.0	    34	.....................................	ATCCATGTGTCTTGCATCCTTGTAATACCAGCCG   	
    275821	    37	 100.0	    34	.....................................	GTAATGCAATTGACACATTGCCCGCATTCTTGAA   	
    275750	    37	 100.0	    36	.....................................	TTTCTCAGCAAAAAAGGCTTGTCTGTTTATCCTTAA 	
    275677	    37	 100.0	    36	.....................................	ACATCCCCCTTTTCCACTACTTCAAAAGATCTCAAC 	
    275604	    37	 100.0	    37	.....................................	GACAAGAAAGGCTCCTCTACTAAAACCCACAAAGTAT	
    275530	    37	 100.0	    36	.....................................	ATCCTAACCCACTCAACGGGATTAACTTTCTTTGAA 	
    275457	    37	 100.0	    37	.....................................	ACTTCCATTTCATCATCAAAATCTCGAATGCTAAAAG	
    275383	    37	 100.0	    34	.....................................	TGTATGTGAAAAGCGTTTTAAAAGCTTAAAGAAA   	
    275312	    37	 100.0	    35	.....................................	GTCGCATCGTTTTCATGGTCGTAGCCTGACTTCTT  	
    275240	    37	  81.1	     0	....A......C...........TT...T.A.....T	|                                    	
==========	======	======	======	=====================================	=====================================	==================
        11	    37	  98.3	    36	CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC	                                     	       

# Left flank :   TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCATATGGAATGCTTTCTGAATTGATTTTTGAAAAATCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTATGCTAAAATAAAGAAGATTTTTGACACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTCAAGTATTGCCTTTTTTTTCGAAAAATCAAGTCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT
# Right flank :  ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTTATATAATTAAACATGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCCGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATAATTAACTTGATAATTATTAAGTGCTTTTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAATTTTCAAAACCATGCCCAACACTGGATTGTCTTTTGTTTTGTACATCTCAACTGAATATAATACTAGTGAATTTATTTTATTAGATAATTATTTCAGTAAGTTCTAATATTCAGGACTAATTTCCCAAGAATATTAACCTCAGCAATATCACTCACTTTAATATCTGGCCAATTATCATTAAGCGTTAAAAGCTCGAATTGTGAGGATGTATAGGACAATTTTTTATATACACAGATAATTGCCT

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:62.16%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.30,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//