Array 1 62518-59177 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNDM010000005.1 Bacteroides ovatus strain 1001262B_160229_F6 NODE_5_length_241058_cov_29.5999, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 62517 45 87.2 30 ...A.-...CA....T..-............................ CTTGCCGAAGTCGGAGATACCGTCCAAGCA A [62508] 62441 47 97.9 30 .........................G..................... TATAAAATTCAGCGTGCCAAACAGCACGAT 62364 47 100.0 30 ............................................... GCGGATGCAGGGCTGCCACGCAACTGTTTA 62287 47 100.0 30 ............................................... AAAATCTATATAAGCCGTGTACTCGTCCGT 62210 47 100.0 30 ............................................... CCGGCAGACTACGAAGACCGCACAGAACAA 62133 47 100.0 29 ............................................... TGAATATAAGGGGGATGTAATACCGGCTA 62057 47 100.0 29 ............................................... TGAATATAAGGGGGATGTAATACCGGCTA 61981 47 100.0 29 ............................................... TGAATATAAGGGGGATGTAATACCGGCTA 61905 47 100.0 29 ............................................... TGAATATAAGGGGGATGTAATACCGGCTA 61829 47 100.0 30 ............................................... CATTTGTTGCAAGGAACGATAAGAAACATA 61752 47 100.0 30 ............................................... ATGAAATTGGGGTCATAACACATAGAGGTA 61675 47 100.0 29 ............................................... AAGGATGGGAAAGCTGAAAGACTTCAAGA 61599 47 100.0 29 ............................................... GCCAACCACACGGATATGATACAGATATT 61523 47 100.0 29 ............................................... GCGATCCGTCAACGTACCGTAGAATGAAA 61447 47 100.0 30 ............................................... CAGGTGAAAATCAAGGCGCAATTAGAGTAT 61370 47 100.0 30 ............................................... ATTAGATTTGCAGCATGAGAGTAGACGACC 61293 47 100.0 30 ............................................... TAGCCATGCGGCGGGCGGCGTAACGTTCAC 61216 47 100.0 30 ............................................... CCCGCCGGAGAGAAATGTATTCTTCCGTTA 61139 47 100.0 30 ............................................... AATGATGTGGTATTCCACCCTGTGTTTGTA 61062 47 100.0 30 ............................................... GCCAACGTGTTTCACCTTCCGAGCACTCGC 60985 47 100.0 30 ............................................... TGTCTTCGCCTTATCAAGTTGCTCAGCCAA 60908 47 100.0 29 ............................................... TATGCAAAGATTATGATGGTAAACATGAA 60832 47 100.0 30 ............................................... TGTCCGGTTAAAGCGCAATGCAGGGCGCAA 60755 47 100.0 30 ............................................... GGGCGAGCTTTCAGGACCGCAACGCCTTAA 60678 47 100.0 29 ............................................... GAGGTTTTGAACGCCCGGAAGATCATAAA 60602 47 100.0 29 ............................................... CCGGGCAATTACTAAAAGTATCAAAAGCC 60526 47 100.0 30 ............................................... TGTTCTTGTTGGCGCAAACTTCGATCGGGA 60449 47 100.0 29 ............................................... CCTGTAGAAGATGAACCGGAAGCACCTGT 60373 47 100.0 30 ............................................... GGATTTCTCATACACGAACGAGTTAGGATA 60296 47 100.0 29 ............................................... TCCAGTAAACGCCCGAAAATCACTTTAAA 60220 47 100.0 30 ............................................... AAAATTCGCTATCATGTTAAACGACCCGGA 60143 47 100.0 29 ............................................... AATAGCAACAAAAGCAATAAGGCGAATGC 60067 47 100.0 29 ............................................... ACCGGGAAAGTACTATGCTCAAAAGGAAT 59991 47 100.0 29 ............................................... TAAAGCCTATTTATCCGAAGCGCAGGCCT 59915 47 100.0 30 ............................................... CCACCGTACTTTGAGATGGGAAAACATAGA 59838 47 100.0 30 ............................................... GAAGAATGTATTGTAATCATCCTCGTTGTT 59761 47 100.0 30 ............................................... AGCGCCAGCCAAAGAACCAATAGCGCCGAT 59684 47 100.0 30 ............................................... CATATAGCATTTGTGCAGCACGACCAATTT 59607 47 100.0 30 ............................................... TATAGATGATTCAAGAACGTTAGTATCGGA 59530 47 100.0 30 ............................................... GTAAAAAGACTTATGGCTATCGTTTGGATA 59453 47 100.0 30 ............................................... CATACCTTGCAAATTTTCGTAATCTGTCAA 59376 47 100.0 29 ............................................... CCTGAATATAAACGTCCGGCATATCAATA 59300 47 100.0 30 ............................................... GTTTTTCACCGCAGACATTACAGAGGTATG 59223 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 44 47 99.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Left flank : GTTCACAAGTTACATAGGTGGGGATTCCATAGTTGGCGATCTCCTGCATAGCAGCCGCACGTTCTTGAGGTACCAGAGTATTCCGCATTATATCCGGATAAAAACGGTTCGTCTCAATGGTCGTACAAAGAACGGATTTCTTCATAACCGGATGCTCCAGATATTTCAGAAAACGGGCGGGATTCTTTGACTGGAAGAGATACTTGTTATCAAAACCGTCACAATAGTCCAGTATCTGCTCAATCCATTCTGACGGGACATTAGCCGCCCATTCATCCGTACTGCTGCCTACAAAGATAAAGTTGCCTTCACCCAGATTCACTTTCAGTTCCTTCAGCTCCAGACGCAAGGGAGGCAGGAGAAGTTTACGTCTCATAAAACAATATGAACAAGAGTGTTCACATTCGCCTTTCATCGGGTTATATGTATGTGAAACGAAGGCATACATGTTCCCGGTACTTTTATTCAGTGCCATATATCATTATGCTTTTCACATCCAT # Right flank : ATATTTTATATAACAAAATGATTTCCAACAAGTTAAAAAGAAAATTAGAAAAGAAAAAAAGTCTGTTTCCAGCACAAAATCTCGCATTAATGCGAGATTTTGTTTTTTAAAATAACTCTAATTGTTGTCCAGGCGTATTAACATTCTGCATTTTCTTTCCATAAAAAAGTTCTATATTACCAAACTGTTTATCGGTAATACACATGATTCCGACATGTCCAAACTCCGGGAGGAAAGATTTAACTCTTTTTATATGTACTGTAGCATTTTCACTACTAGCACAGTGACGCACATAAATGGAAAATTGAAACATAGTAAAACCATCCTTTTGCAGATTCTTTCTAAAGTCCGCATAAGCCTTCTTTTCTTTCTTCGTCTCAGTCGGCAAATCAAAAAAAACAAGTACCCACATAATACGATATTCACTAAAGCGATCCATTATCGTTCAGGATAAGCTATTCGACGAATTTCTCCATTGAAACATTTGTAAAGTGAGGAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //