Array 1 215049-213444 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP022015.1 Klebsiella quasipneumoniae strain WP3-S18-ESBL-03 plasmid pWP3-S18-ESBL-03_1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 215048 28 96.6 32 ..........-.................. TCCGGATGATGACATTTCGGGTGATAATCATA 214988 28 96.6 33 ..........-.................. GGGGCCAGCTCCCGGACGAGAAATGTGACGCCC 214927 28 96.6 32 ..........-.................. ATTCCGTTCATAATTTTGTAGCTGCCCGCTAT 214867 29 100.0 32 ............................. TTCTCTCCGCCGGGCAGTGTGATGCCGGAGGG 214806 29 100.0 32 ............................. GCAGCGGCCTGACGATGATCGATATGAACGGC 214745 29 93.1 32 .............A...A........... TGAAATTGACGAGTGGATCAATCAGCGTATTG 214684 28 89.7 32 ..........-.TA............... TCACTTTTGCGTCGAGCCAAGTTATTATCTCA 214624 29 93.1 32 ............TG............... TAATTTAGGAAATGAATTCTAAAATTGAATCT 214563 28 93.1 32 ..........-..A............... TGAGGCTGCTGACGGAGAATTGGGACCTGTTC 214503 29 100.0 32 ............................. TAAGCTGATCGTTGCCGTAATGCGAAGCGGGA 214442 29 96.6 32 ...............T............. TGACTTTTGTGAAATTTTTTTCTTAAAAAACT 214381 28 82.8 32 ..........A..AC.T....-....... TTAATGTTTTGTTAATTTATAAGTGTGGTGAA 214321 29 93.1 32 .........T...C............... CGTTCGGCTAGGGCGTTGACGGACGCATTTTC 214260 28 86.2 32 ...C......-..AC.............. CGGTAACGCAAATGTGATCCGATGTCGTCAGG 214200 29 100.0 32 ............................. AACAGTGGGATTTCACCTTTTAGGTTGAGTCA 214139 29 93.1 32 ............TA............... TCACTTTTGCGTCGAGCCAAGTTATTATCTCA 214078 28 93.1 32 ..........-..A............... GCCATGCAACGTCTGAACGTCCGAAACATCCC 214018 29 96.6 32 .............A............... AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 213957 29 96.6 32 .............A............... CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 213896 29 100.0 32 ............................. TCGAAGGCAACCACCAGGAACAATAAAACCCC 213835 29 89.7 32 .A..........TG............... CCGACCCGGTGCCCAGGAGAACTGGCTGAATA 213774 28 89.7 31 ..........-..G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 213715 29 93.1 32 .............A............T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 213654 29 93.1 32 ............TC............... TTACGCATTGTGATCAGGATTCGCTTCAGACG 213593 29 93.1 32 ............TA............... TCGCCCAGTCCAAAGGGGATGATGCAGGATTG 213532 29 100.0 32 ............................. GGCATGAGCGCGAACCACTGCGAGAGTGTGGT 213471 28 86.2 0 ..........A..A.........-....A | ========== ====== ====== ====== ============================= ================================= ================== 27 29 94.1 32 GTATTCCCCCCGCTTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTACGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTACATTAATCCGCTTTGCAGCCGAGCCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTGAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCGGGTGGATTTTAGTGGTGCTATTTATTATTTTATAATCAACCGGTTATTTTTAGA # Right flank : CATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGCTAGCGTTAAAGGAACATTTAGCCGTGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTATTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACATGATCGGCTTTTCCGTCACATTCATTCAGCTCAGCACCAAAATCACCGCAAACTTCACCTGCATACTGATTTACTTTTTCCAGATGTAACTCACCGAAAAC # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCTTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //