Array 1 78822-80358 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXCW01000005.1 Moraxella catarrhalis strain 3753746B 3753746B_contig_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 78822 28 96.4 32 .............T.............. ATCAATAAAAGTTTGAATACGCTTAAAAATCC 78882 28 96.4 32 .............T.............. GCCCGTGGCACGCCCTGCAAACAGCTCATCGC 78942 28 96.4 33 .............T.............. CCCCTTGATTTTTTTAATCTCATCTTGAATATA 79003 28 96.4 32 .............T.............. AACACGGTTGTACCGACCAGCGCCTTTTTGGT 79063 28 96.4 32 .............T.............. AAGCGACAAAATATCACCTTCAAAATAAAAGT 79123 28 96.4 32 .............T.............. ATAGCTTTATAGAAGTAAGGTAGTAACTGTTT 79183 28 100.0 33 ............................ TTTTACTGGGTCAATCGAACAGATAGCGTCTGC 79244 28 100.0 32 ............................ CCTGCACAGAACAATGAAAGACCGATTACAAC 79304 28 100.0 32 ............................ GCCAAAAACAGGCGTTGGCTTGGCAGTACTTG 79364 28 92.9 33 ...T........G............... GTGGTAGGACGATTGCCAAAATTAAAAGATACA 79425 28 96.4 32 ............G............... ATATACCACTGGCATTGTGTGGTGTAATACTC 79485 28 100.0 33 ............................ ACTTTTTCAAGGTATAAGTCATAGGCTGTTTTA 79546 28 100.0 34 ............................ ATAGAAGCTTCATCTATAATGATAATTGAATACA 79608 28 100.0 33 ............................ ACTTGTCTACTCGTTTTTCAGCGACATCTAGTA 79669 28 100.0 32 ............................ TGATAACGGATTAAAATTAGCAGTATTGCTAA 79729 28 96.4 32 ...................A........ TTATGTTTGTACCGAACAAAAGGCATATGCCC 79789 28 100.0 32 ............................ GTCAATGCCGTGAATTCCCCTTTTTCCCTGCG 79849 28 100.0 33 ............................ CCGATTGATACTGGGTCGATTTGGCTAACTACC 79910 28 100.0 33 ............................ AGCCTAAAGTGATTATTTGCAATTCCCCATCAA 79971 28 100.0 31 ............................ AACTGTGCGTCAGTCAAATCATCCGCATTAA 80030 28 100.0 33 ............................ CTTGTTACATCTGATACTAAAACATCTTGAAAA 80091 28 100.0 32 ............................ AATAGGCAAGCTATCCGCATTGCCCTTTAAGC 80151 28 100.0 32 ............................ ATTTCGTCTTTATCTTCGCTATCTGGCATATT 80211 28 100.0 32 ............................ GTAATGACTTCCCCAGTCTTGATATCAAACGG 80271 28 96.4 32 ..................T......... GTCAATGCGACTGTTTGACAGCTTGAGCTCGC 80331 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 26 28 98.5 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TCGCATTGCGGCTTGGGTGATGGATGTCCCTGTGCCAAGTAAGATGACTGTGGTATTGGCGATGGGGATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTGAGATACAGGATGCGCCCGTCTTTTTGCATCACTCGGCAATGCTCAAGATAAAATACATTGGCACGCTTGGAGTGCAAAATTGCCTTAAGATCCGTGGGTTTGAGCGTATCCATGACGTCAATTTCCTTAATGATGAATTTAATTTAATCACACCCATTATAGCCTGTCAAGCGATGATGCGACCAAATTATAAGCTTATATTATCCATCTGCCATATCAGTTATGCTATACTAAATTTGCCATCAGATGATGATGGGTGTAAAAAACCTTTATTTTTTCAACTATTTAAAAACTTAATAAAATCAATAAGTTATAACTGGTCAACTTTTGATTGGATAAAAAGGGTCAATCCATCATAAATGGCTGTTATTTCTTAATTTTTTCGGTTATAATTACT # Right flank : ATTTCGTTCTACAACTACGCTGATTATTTAAAATTTTTGTACCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGTAATTTATGACCGAGCAAACCACCGAACAAACCACCATGGAAGAGATTACGGCTGAGGCGACAACCGAGCAAGTCGAAGCACTTCACAGCCAAATCCAAGCACTAGAAAGTGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATTACTTGAAGGTATTCGCCTAACACATAAAGTACTGCTTAGCGTCCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : CTTCACGACCGCATAGGTCGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //