Array 1 69631-71001 **** Predicted by CRISPRDetect 2.4 *** >NZ_UATK01000009.1 Photobacterium damselae strain NCTC11648, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 69631 29 100.0 32 ............................. CATTAACAACTTTATTCCATCAGTTGTTTCTC 69692 29 100.0 32 ............................. CTAACAACCTGTTGGAGCGACATATCGGATTC 69753 29 100.0 32 ............................. TCGATTTCAGAGGGAGGACAGGCCACACGATA 69814 29 100.0 32 ............................. TATGACCGCATTGTTTGACGATCCCGAAGTGC 69875 29 100.0 32 ............................. TTTTGCCCTGCAAAGGCTGCGTGTCCCGAAAA 69936 29 100.0 32 ............................. GTTTCTTCTTACTTGTCGGCGTGTTATTCGTA 69997 29 100.0 32 ............................. TAATCTCGGGTATGTGCAAGGAATTCGTTCGT 70058 29 100.0 32 ............................. ATCATCAGGATCATTAATGTCATAGTCTGGTA 70119 29 96.6 32 ............................A TAATCATTGGTACCCATTTGGCTAATTTTATC 70180 29 100.0 32 ............................. ATAGCTTGTCTTACTTGCTCTGACATTTCACG 70241 29 100.0 32 ............................. TCAGAAACGTATTCGACTAACGTAGTATTAAA 70302 29 100.0 32 ............................. GCAGTTAAAACCCTTATTTCACGCCTTGAGGC 70363 29 100.0 32 ............................. AAATCAAGAACTACTCAGAGAGTACGGAAACA 70424 29 100.0 32 ............................. GGTTATGAGTAATATTGTTGAATTCGTTAAGG 70485 29 100.0 32 ............................. ATGCTGGTTAACTGGCATCATCACCTAATGGC 70546 29 100.0 32 ............................. AACAAAAAGAATGGACAGGTAACCAAATACGG 70607 29 100.0 32 ............................. TGGTAATGTTTAATATCGCGTTATTTGTCATA 70668 29 100.0 32 ............................. AATTGCGGTTTGAACTGAAACGATTTGCTCAC 70729 29 100.0 32 ............................. ATAAGACGGTTGGTGATGTTCTAACGGGTAGT 70790 29 100.0 32 ............................. GGGCCGTGTATATCGCGTACTGCGTGGACCGC 70851 29 100.0 32 ............................. CGCACCGTCTGAATATTTTTTTGACTTAGTGC 70912 29 100.0 32 ............................. ATGTTCGCAGACACAGAAGACGATGAAAAGGT 70973 29 86.2 0 ...................A....GGG.. | ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.3 32 GTGTTCCCTATACCCATAGGGATGAACCG # Left flank : ACACTGCATGCGTCATAGGCTGATCTGCCACCACAATCACCACCCCTTTTTCCATGATGCGGGCTTTTAAAGTTTTCCATTCAAACCATGGTAAACGAGTAAGGCGATCCATTTTTTCAATCAGCAACACATCACCGGTTTCGCTGTCGTCGATCAACTTGTTGAGTTCTGGCCGTTCTAACTTGGTGCCGGATTGGTTTTCGATGTAATAGCCAGCAATACGAAAATTGAACTTAGCGCCAAAGGCTTTCAGTTCTTCTTTTGCCCGTTGGGCATCTTGCTCGGAGGTTGAGGCACGAAGGTAAGCACGGATCAGCATGATTTCCCCTAAACTGGTTTAATTTAAGTTAGTTTCTAAAATAAGTTTAGTATAAATGGTTTCTCAAATGAAGCGGCAAGGGTTGAGAGGCGGTGGGAAGTGGTTTCGTTAGGGTATACCTAAAAGTTGGTAAAAATTTCCCTCTTTTTTTTGATATAAAAATCATTATATTATATTTAGT # Right flank : GTAGCAGCCCGTGATCTCCGCAGTGAGTCAGTGCTAAACGAAACTCATACAGATGATACGATATACTCGGCTCGCATCGGCATATTTATATTTCTGTTCACGCTAGGTATGTACTCACAATTAGTGATGCAGCCTAGGGTGAGTATTGCCAAAATTCCACTCAACCTCTCTCTTATCCGCATTATTCTATAGCTGTGAGTTTATTCGCAGTATTACTTTAACAGCTGTTGCACGCTATTTGTCTATCTTCACTTAAGGTTGTTTACTATGAGCTATTACGATTACTGGGGGAAAACGGATAAATCAGATCCATCTCACTATCATTTATTACCCTATCACAGCTTAGATGTTGCAGCAGTTGGACAACAACTACTTTCAACTGATGCGATTTTAACTCGTGAGTTGTCTCAACTACTTGATATTGATGAAAAACAGCTATCTAACTTGGTGGTTTTTTTTATTGCTTTGCATGATTTAGGGAAATTTGCCTCAGCATTTCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTATACCCATAGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 79937-82101 **** Predicted by CRISPRDetect 2.4 *** >NZ_UATK01000009.1 Photobacterium damselae strain NCTC11648, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 79937 29 100.0 33 ............................. CTCTGAACGCTGCTTGCGTAGTGTGTCGTTATA 79999 29 100.0 32 ............................. CTGGTGCGTCAACCCTTGCTAGTGCTGTTATC 80060 29 100.0 32 ............................. ATACGGTTTTGCATCATCTTCATGACGAATTT 80121 29 100.0 32 ............................. TTGAACTTTCTTTGCTGAGTTATGAATTCAAG 80182 29 100.0 32 ............................. ATAATACTAAATAATTAAATGTGTCATTATAA 80243 29 100.0 32 ............................. ATACTTTGCATTTGTCGCCGTAGTTGAATTTG 80304 29 100.0 32 ............................. CCTCGCGCTCTTGTAATAAAAGAATCTTGCGA 80365 29 100.0 32 ............................. TATGTAAATACTTCAAAACCCTTTCCACCGCC 80426 29 100.0 32 ............................. AGTGCTGAATCTCATCTATTGATGCGTACCCA 80487 29 100.0 32 ............................. CGTAAATCCAACATTGTACGATCATGACGAAC 80548 29 100.0 32 ............................. TAGAGATAATAAAATAGGGCTAACGTCCATAT 80609 29 100.0 32 ............................. AGCTACTATCGATGTGATATGGTCTTTTATCA 80670 29 100.0 32 ............................. GCCCGCTTGACCACTTCGCGGGGATAGACACT 80731 29 100.0 32 ............................. TCACGCCACTTAGTCTCATCGACTACCGAGCC 80792 29 100.0 32 ............................. TGAAGAGTTCGACAATGAGGTAGCGTTAATCA 80853 29 100.0 32 ............................. ATGCCAGCACCACAAAAGGCTTACTGGCTAGA 80914 29 100.0 32 ............................. GCTGCTTAAAATATCAGAGTCAGAACCGTCTT 80975 29 100.0 32 ............................. ATATGGATGCTTCATCTTTCAAGCCAAAAGGC 81036 29 100.0 32 ............................. TTTGTAGATAAAGTTAATAGAATCACACCTGA 81097 29 100.0 32 ............................. TATCGGTATGGGACGATGAAGACAACTTAATC 81158 29 100.0 32 ............................. TCACCTATTTAGGCAGATCAGATAGTTTAACA 81219 29 100.0 32 ............................. TCGACACAGGCGTCGATTGTAATGTCTTTCGG 81280 29 100.0 32 ............................. ACTGATGAAAATGGTGTTGTAGAAGAAATTGA 81341 29 100.0 32 ............................. TTTCTCCTCAAGCTGTTTCAGGTTGGGAAAGA 81402 29 100.0 32 ............................. TACCGCCATACTTACGAACTTGGATTAAGGAT 81463 29 96.6 32 ............................A TTTGAAGTTGATGATGGTCGTAAATTCTACCC 81524 29 100.0 32 ............................. ATATGTACGATGAGACAGGGTGTGATAACAAC 81585 29 100.0 32 ............................. ATTTATCGCAATCAAAATGGCGATGAAATCAC 81646 29 100.0 32 ............................. GAGGTGAGAAGACTAGATACACACTCTTGTCA 81707 29 100.0 32 ............................. CTGTAAAAGTAGCCCATACATTTGACGCATTT 81768 29 100.0 32 ............................. AATACTGACTATCGTTTTATCGAGTGTTTGAA 81829 29 100.0 32 ............................. CCTGAAACGTTACTATCACACAATTAAGTTAC 81890 29 100.0 32 ............................. TACATGCTCTTTTGCTCTATCGACTATCAAGA 81951 29 96.6 32 ............................A ACGAACCGGGTTTTTGTGGTAACACATACTCA 82012 29 100.0 32 ............................. AAACAAAAACAGCACTAGAAATGTCAGAGCGT 82073 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.7 32 GTGTTCCCTATACCCATAGGGATGAACCG # Left flank : ACTCATCGATGAAGTACTCAGTGCGGGAGATATTACACCTCCTGAACCTTATATAGATGCACAACCTCCTGCTATACCAGAGCCAATTACGATTGGTGATTTTGGTCATCGGAGCCAATGATCTCATGAGTATGTTAGTTGTAGTAACGGAAGCCGTACCACCGCGTCTGAGAGGGCGTCTTGCTGTTTGGTTATTAGAAGTCAGAGCGGGTGTATATATAGGGAATGTTTCTAGAAGAGTCAGGGAAATGATTTGGGAACAAATTGAATGTCTTACTGAAGATGGCAATGTTGTAATGGCATGGGGAACTAATACCGAATCTGGCTTTGATTTTCAAACCTATGGCAAAAATCGTCGAGAGCCTGTTGATTTAGATGGGTTACGGTTAGTGAAATTTTTACCTGCTGATATGATAACTGAATGAAAAAATGTTCTTTAAAATGTTGGTAGATTTTTAATGATAGTGTTTTACCTTATAAATCAATAAGATATTTTTAGA # Right flank : ATGATGGCCTTGGCCTTATTCGCTCGTTCCACTGAGGTAGAACGCCACTGACTTATCGTGCTTATGATATATTAGTGTTACCGTCATGTAAGAAAACGTTGACTCAGACTCACAAAAATACATGTGTATGATTGCGCTTGTTGCGTCATCAATAAACGCCAATAACGTGCATTCGTCAGCTCATCCTTCAAACCAATAATGGGGTGAACCATCGACTTGAGCTAGCACACCCAAACAATCACTCCTTGCGCAAGGTTGGTATACTTTCCTACACTTTTTCTGTTTTGGCATCCAAAGGTTGTTAGTAATCACCCATTGACGAACCGCCTCGCCTGATAAATATATACTATTGATTTATAATGCTTTTTAAGCAATTTAATTAAGGCAAAAATCATAGTGATGTATTTGGATTAACTCCAGAACTAGGGATTTAAGGAGGAAGCAATACTGATGGTTCCCTGGTCGGGTTCGCTGCTTAGAAATAAGTCCTTGAAGACCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTATACCCATAGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //